RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 NRXN1Q9ULB1 1477 aa25.04■■□□□ 1.6
CTSD-212ENST00000637815 PANK3Q9H999 370 aa25.02■■□□□ 1.6
CTSD-212ENST00000637815 RICTORQ6R327 1708 aa25.02■■□□□ 1.6
CTSD-212ENST00000637815 EIF3AQ14152 1382 aaKnown RBP25.02■■□□□ 1.6
CTSD-212ENST00000637815 CFAP65Q6ZU64 1925 aaKnown RBP25.01■■□□□ 1.59
CTSD-212ENST00000637815 MYOM1P52179 1685 aa25.01■■□□□ 1.59
CTSD-212ENST00000637815 NPATQ14207 1427 aa25.01■■□□□ 1.59
CTSD-212ENST00000637815 ABCC3O15438 1527 aa24.99■■□□□ 1.59
CTSD-212ENST00000637815 PPLO60437 1756 aa24.99■■□□□ 1.59
CTSD-212ENST00000637815 IRX6P78412 446 aaPredicted RBP24.99■■□□□ 1.59
CTSD-212ENST00000637815 DIP2CQ9Y2E4 1556 aa24.99■■□□□ 1.59
CTSD-212ENST00000637815 NUDCQ9Y266 331 aa24.98■■□□□ 1.59
CTSD-212ENST00000637815 CAMSAP1Q5T5Y3 1602 aa24.98■■□□□ 1.59
CTSD-212ENST00000637815 KDM5AP29375 1690 aaKnown RBP24.98■■□□□ 1.59
CTSD-212ENST00000637815 CDCA8Q53HL2 280 aa24.98■■□□□ 1.59
CTSD-212ENST00000637815 ZMYM4Q5VZL5 1548 aa24.97■■□□□ 1.59
CTSD-212ENST00000637815 MYO3AQ8NEV4 1616 aa24.97■■□□□ 1.59
CTSD-212ENST00000637815 SETBP1Q9Y6X0 1596 aa24.95■■□□□ 1.58
CTSD-212ENST00000637815 ADGRF5Q8IZF2 1346 aa24.95■■□□□ 1.58
CTSD-212ENST00000637815 INSRP06213 1382 aa24.95■■□□□ 1.58
CTSD-212ENST00000637815 GLI2P10070 1586 aa24.94■■□□□ 1.58
CTSD-212ENST00000637815 SIGLEC1Q9BZZ2 1709 aa24.93■■□□□ 1.58
CTSD-212ENST00000637815 ZC3H13Q5T200 1668 aaKnown RBP24.92■■□□□ 1.58
CTSD-212ENST00000637815 CC2D1BQ5T0F9 858 aaKnown RBP24.92■■□□□ 1.58
CTSD-212ENST00000637815 PPP4R2Q9NY27 417 aa24.91■■□□□ 1.58
CTSD-212ENST00000637815 RNF123Q5XPI4 1314 aa24.91■■□□□ 1.58
CTSD-212ENST00000637815 PIK3C2BO00750 1634 aa24.91■■□□□ 1.58
CTSD-212ENST00000637815 CFAP70Q5T0N1 1121 aa24.91■■□□□ 1.58
CTSD-212ENST00000637815 GGT6Q6P531 493 aa24.9■■□□□ 1.58
CTSD-212ENST00000637815 SLC24A1O60721 1099 aa24.9■■□□□ 1.58
CTSD-212ENST00000637815 NOS1P29475 1434 aa24.89■■□□□ 1.58
CTSD-212ENST00000637815 RAPGEF3O95398 923 aa24.89■■□□□ 1.57
CTSD-212ENST00000637815 ASXL1Q8IXJ9 1541 aa24.87■■□□□ 1.57
CTSD-212ENST00000637815 ERVK-7P63135 1459 aa24.87■■□□□ 1.57
CTSD-212ENST00000637815 PIK3C2GO75747 1445 aa24.87■■□□□ 1.57
CTSD-212ENST00000637815 BLMP54132 1417 aaPredicted RBP24.87■■□□□ 1.57
CTSD-212ENST00000637815 SBNO2Q9Y2G9 1366 aa24.86■■□□□ 1.57
CTSD-212ENST00000637815 NPC1L1Q9UHC9 1359 aa24.85■■□□□ 1.57
CTSD-212ENST00000637815 AMER1Q5JTC6 1135 aaPredicted RBP24.85■■□□□ 1.57
CTSD-212ENST00000637815 KNSTRNQ9Y448 316 aa24.85■■□□□ 1.57
CTSD-212ENST00000637815 ARHGAP31Q2M1Z3 1444 aa24.84■■□□□ 1.57
CTSD-212ENST00000637815 RPGRIP1LQ68CZ1 1315 aa24.83■■□□□ 1.57
CTSD-212ENST00000637815 RIMBP3CA6NJZ7 1639 aa24.82■■□□□ 1.56
CTSD-212ENST00000637815 RIMBP3BA6NNM3 1639 aa24.82■■□□□ 1.56
CTSD-212ENST00000637815 RIMBP3Q9UFD9 1639 aa24.82■■□□□ 1.56
CTSD-212ENST00000637815 ADGRB1O14514 1584 aa24.82■■□□□ 1.56
CTSD-212ENST00000637815 PDE3BQ13370 1112 aa24.79■■□□□ 1.56
CTSD-212ENST00000637815 QRICH2Q9H0J4 1663 aa24.79■■□□□ 1.56
CTSD-212ENST00000637815 YEATS2Q9ULM3 1422 aa24.79■■□□□ 1.56
CTSD-212ENST00000637815 SENP3-EIF4A1A0A087X0R7 540 aa24.78■■□□□ 1.56
CTSD-212ENST00000637815 CHGAP10645 457 aaKnown RBP24.78■■□□□ 1.56
CTSD-212ENST00000637815 DIP2BQ9P265 1576 aa24.78■■□□□ 1.56
CTSD-212ENST00000637815 C14orf93Q9H972 538 aaKnown RBP24.78■■□□□ 1.56
CTSD-212ENST00000637815 NEXMIFQ5QGS0 1516 aa24.77■■□□□ 1.56
CTSD-212ENST00000637815 PPP2R1AP30153 589 aa24.76■■□□□ 1.55
CTSD-212ENST00000637815 CYB5RLQ6IPT4 315 aa24.75■■□□□ 1.55
CTSD-212ENST00000637815 PREX1Q8TCU6 1659 aa24.74■■□□□ 1.55
CTSD-212ENST00000637815 CENPJQ9HC77 1338 aaPredicted RBP24.73■■□□□ 1.55
CTSD-212ENST00000637815 MYO5BQ9ULV0 1848 aa24.71■■□□□ 1.55
CTSD-212ENST00000637815 ARHGEF28Q8N1W1 1705 aaKnown RBP24.7■■□□□ 1.54
CTSD-212ENST00000637815 B4GALNT3Q6L9W6 998 aa24.69■■□□□ 1.54
CTSD-212ENST00000637815 RBM19Q9Y4C8 960 aaKnown RBP24.69■■□□□ 1.54
CTSD-212ENST00000637815 REREQ9P2R6 1566 aa24.67■■□□□ 1.54
CTSD-212ENST00000637815 TSPOAP1O95153 1857 aa24.67■■□□□ 1.54
CTSD-212ENST00000637815 ZFYVE9O95405 1425 aa24.67■■□□□ 1.54
CTSD-212ENST00000637815 TMEM131LA2VDJ0 1609 aa24.66■■□□□ 1.54
CTSD-212ENST00000637815 ADAMTS8Q9UP79 889 aa24.66■■□□□ 1.54
CTSD-212ENST00000637815 VGFO15240 615 aaPredicted RBP24.65■■□□□ 1.54
CTSD-212ENST00000637815 SLC52A1Q9NWF4 448 aa24.64■■□□□ 1.54
CTSD-212ENST00000637815 TRAK1Q9UPV9 953 aa24.64■■□□□ 1.54
CTSD-212ENST00000637815 SALL2Q9Y467 1007 aaPredicted RBP24.64■■□□□ 1.54
CTSD-212ENST00000637815 CARD14Q9BXL6 1004 aa24.64■■□□□ 1.53
CTSD-212ENST00000637815 RCAN3Q9UKA8 241 aa24.63■■□□□ 1.53
CTSD-212ENST00000637815 FAM69CQ0P6D2 419 aa24.62■■□□□ 1.53
CTSD-212ENST00000637815 USP32Q8NFA0 1604 aa24.62■■□□□ 1.53
CTSD-212ENST00000637815 IDI1Q13907 227 aa24.62■■□□□ 1.53
CTSD-212ENST00000637815 WDR43Q15061 677 aaKnown RBP eCLIP24.62■■□□□ 1.53
CTSD-212ENST00000637815 RRP1P56182 461 aaKnown RBP24.61■■□□□ 1.53
CTSD-212ENST00000637815 TMEM132EQ6IEE7 984 aa24.61■■□□□ 1.53
CTSD-212ENST00000637815 CDCA7LQ96GN5 454 aa24.6■■□□□ 1.53
CTSD-212ENST00000637815 AGLP35573 1532 aa24.6■■□□□ 1.53
CTSD-212ENST00000637815 PUS7Q96PZ0 661 aaKnown RBP24.57■■□□□ 1.52
CTSD-212ENST00000637815 TULP4Q9NRJ4 1543 aa24.56■■□□□ 1.52
CTSD-212ENST00000637815 NSD3Q9BZ95 1437 aa24.54■■□□□ 1.52
CTSD-212ENST00000637815 PLEKHH1Q9ULM0 1364 aa24.54■■□□□ 1.52
CTSD-212ENST00000637815 CCDC136Q96JN2 1154 aa24.53■■□□□ 1.52
CTSD-212ENST00000637815 ZNF521Q96K83 1311 aa24.53■■□□□ 1.52
CTSD-212ENST00000637815 NUTM2DQ5VT03 806 aaPredicted RBP24.52■■□□□ 1.52
CTSD-212ENST00000637815 PPP6R1Q9UPN7 881 aa24.51■■□□□ 1.51
CTSD-212ENST00000637815 CLTCQ00610 1675 aaKnown RBP24.51■■□□□ 1.51
CTSD-212ENST00000637815 POLR3AO14802 1390 aaPredicted RBP24.5■■□□□ 1.51
CTSD-212ENST00000637815 EVC2Q86UK5 1308 aa24.5■■□□□ 1.51
CTSD-212ENST00000637815 SLC12A5Q9H2X9 1139 aa24.49■■□□□ 1.51
CTSD-212ENST00000637815 KIF13AQ9H1H9 1805 aa24.49■■□□□ 1.51
CTSD-212ENST00000637815 SHPRHQ149N8 1683 aa24.49■■□□□ 1.51
CTSD-212ENST00000637815 SPATA31D1Q6ZQQ2 1576 aa24.46■■□□□ 1.51
CTSD-212ENST00000637815 PTPRMP28827 1452 aa24.46■■□□□ 1.51
CTSD-212ENST00000637815 FBXO31Q5XUX0 539 aaPredicted RBP24.45■■□□□ 1.5
CTSD-212ENST00000637815 ARHGEF40Q8TER5 1519 aa24.45■■□□□ 1.5
CTSD-212ENST00000637815 ANKRD36BQ8N2N9 1353 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms