RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 XIRP1Q702N8 1843 aaKnown RBP19.29■□□□□ 0.68
CTSD-208ENST00000636843 ZFYVE9O95405 1425 aa19.27■□□□□ 0.68
CTSD-208ENST00000636843 PLEKHG1Q9ULL1 1385 aa19.27■□□□□ 0.67
CTSD-208ENST00000636843 NKTRP30414 1462 aaKnown RBP19.26■□□□□ 0.67
CTSD-208ENST00000636843 RIMS2Q9UQ26 1411 aa19.26■□□□□ 0.67
CTSD-208ENST00000636843 PPP1R15AO75807 674 aaPredicted RBP19.25■□□□□ 0.67
CTSD-208ENST00000636843 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.25■□□□□ 0.67
CTSD-208ENST00000636843 UNC13BO14795 1591 aa19.25■□□□□ 0.67
CTSD-208ENST00000636843 NWD1Q149M9 1564 aa19.24■□□□□ 0.67
CTSD-208ENST00000636843 GCC2Q8IWJ2 1684 aa19.23■□□□□ 0.67
CTSD-208ENST00000636843 RBM33Q96EV2 1170 aaKnown RBP19.23■□□□□ 0.67
CTSD-208ENST00000636843 CHGAP10645 457 aaKnown RBP19.22■□□□□ 0.67
CTSD-208ENST00000636843 TBX22Q9Y458 520 aa19.22■□□□□ 0.67
CTSD-208ENST00000636843 TMEM131LA2VDJ0 1609 aa19.22■□□□□ 0.67
CTSD-208ENST00000636843 MSH6P52701 1360 aa19.21■□□□□ 0.67
CTSD-208ENST00000636843 NUP155O75694 1391 aa19.2■□□□□ 0.66
CTSD-208ENST00000636843 MYO5BQ9ULV0 1848 aa19.18■□□□□ 0.66
CTSD-208ENST00000636843 IQGAP3Q86VI3 1631 aa19.18■□□□□ 0.66
CTSD-208ENST00000636843 E9PCH4 1651 aa19.18■□□□□ 0.66
CTSD-208ENST00000636843 ITGAEP38570 1179 aa19.17■□□□□ 0.66
CTSD-208ENST00000636843 SLAIN2Q9P270 581 aa19.17■□□□□ 0.66
CTSD-208ENST00000636843 NCOA3Q9Y6Q9 1424 aa19.17■□□□□ 0.66
CTSD-208ENST00000636843 ROBO1Q9Y6N7 1651 aa19.16■□□□□ 0.66
CTSD-208ENST00000636843 RGS17Q9UGC6 210 aaPredicted RBP19.15■□□□□ 0.66
CTSD-208ENST00000636843 CHD2O14647 1828 aaKnown RBP19.15■□□□□ 0.66
CTSD-208ENST00000636843 PIK3R4Q99570 1358 aa19.15■□□□□ 0.66
CTSD-208ENST00000636843 ADAMTS13Q76LX8 1427 aa19.14■□□□□ 0.66
CTSD-208ENST00000636843 NUTM2DQ5VT03 806 aaPredicted RBP19.14■□□□□ 0.65
CTSD-208ENST00000636843 DIP2AQ14689 1571 aa19.12■□□□□ 0.65
CTSD-208ENST00000636843 PPARGC1BQ86YN6 1023 aaKnown RBP19.11■□□□□ 0.65
CTSD-208ENST00000636843 C14orf37Q86TY3 774 aa19.1■□□□□ 0.65
CTSD-208ENST00000636843 C19orf44Q9H6X5 657 aa19.1■□□□□ 0.65
CTSD-208ENST00000636843 CADPS2Q86UW7 1296 aa19.08■□□□□ 0.64
CTSD-208ENST00000636843 JCADQ9P266 1359 aa19.07■□□□□ 0.64
CTSD-208ENST00000636843 AMOTL2Q9Y2J4 779 aa19.07■□□□□ 0.64
CTSD-208ENST00000636843 ATF3P18847 181 aa19.06■□□□□ 0.64
CTSD-208ENST00000636843 TRPM2O94759 1503 aa19.06■□□□□ 0.64
CTSD-208ENST00000636843 PHLPP1O60346 1717 aa19.05■□□□□ 0.64
CTSD-208ENST00000636843 POTEAQ6S8J7 498 aa19.05■□□□□ 0.64
CTSD-208ENST00000636843 PTPRUQ92729 1446 aa19.04■□□□□ 0.64
CTSD-208ENST00000636843 ZNF326Q5BKZ1 582 aaKnown RBP19.04■□□□□ 0.64
CTSD-208ENST00000636843 RRBP1Q9P2E9 1410 aaKnown RBP19.02■□□□□ 0.64
CTSD-208ENST00000636843 PCGF6Q9BYE7 350 aa19.02■□□□□ 0.64
CTSD-208ENST00000636843 SPHKAPQ2M3C7 1700 aa19.01■□□□□ 0.63
CTSD-208ENST00000636843 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.01■□□□□ 0.63
CTSD-208ENST00000636843 SETBP1Q9Y6X0 1596 aa19.01■□□□□ 0.63
CTSD-208ENST00000636843 TRIM26Q12899 539 aaPredicted RBP19■□□□□ 0.63
CTSD-208ENST00000636843 DCCP43146 1447 aa18.99■□□□□ 0.63
CTSD-208ENST00000636843 COL16A1Q07092 1604 aaPredicted RBP18.99■□□□□ 0.63
CTSD-208ENST00000636843 SPATA31A6Q5VVP1 1343 aa18.99■□□□□ 0.63
CTSD-208ENST00000636843 NAIPQ13075 1403 aa18.99■□□□□ 0.63
CTSD-208ENST00000636843 AHDC1Q5TGY3 1603 aaPredicted RBP18.97■□□□□ 0.63
CTSD-208ENST00000636843 BRINP3Q76B58 766 aa18.97■□□□□ 0.63
CTSD-208ENST00000636843 NRXN3Q9Y4C0 1643 aa18.96■□□□□ 0.63
CTSD-208ENST00000636843 METP08581 1390 aa18.96■□□□□ 0.63
CTSD-208ENST00000636843 XRN1Q8IZH2 1706 aaKnown RBP18.95■□□□□ 0.62
CTSD-208ENST00000636843 CLTCL1P53675 1640 aa18.94■□□□□ 0.62
CTSD-208ENST00000636843 MEX3CQ5U5Q3 659 aaKnown RBP18.93■□□□□ 0.62
CTSD-208ENST00000636843 NEXMIFQ5QGS0 1516 aa18.92■□□□□ 0.62
CTSD-208ENST00000636843 TRIM52Q96A61 297 aa18.92■□□□□ 0.62
CTSD-208ENST00000636843 VGFO15240 615 aaPredicted RBP18.91■□□□□ 0.62
CTSD-208ENST00000636843 LRP6O75581 1613 aa18.91■□□□□ 0.62
CTSD-208ENST00000636843 HFM1A2PYH4 1435 aa18.9■□□□□ 0.62
CTSD-208ENST00000636843 MST1RQ04912 1400 aa18.9■□□□□ 0.62
CTSD-208ENST00000636843 ZNF772Q68DY9 489 aaPredicted RBP18.9■□□□□ 0.62
CTSD-208ENST00000636843 ADGRL3Q9HAR2 1447 aa18.9■□□□□ 0.62
CTSD-208ENST00000636843 SHPRHQ149N8 1683 aa18.89■□□□□ 0.61
CTSD-208ENST00000636843 ASXL1Q8IXJ9 1541 aa18.89■□□□□ 0.61
CTSD-208ENST00000636843 SLC4A1APQ9BWU0 796 aaKnown RBP18.89■□□□□ 0.61
CTSD-208ENST00000636843 RPGRIP1LQ68CZ1 1315 aa18.88■□□□□ 0.61
CTSD-208ENST00000636843 KIF1BO60333 1816 aa18.88■□□□□ 0.61
CTSD-208ENST00000636843 SETD5Q9C0A6 1442 aa18.87■□□□□ 0.61
CTSD-208ENST00000636843 LRRC59Q96AG4 307 aaKnown RBP18.86■□□□□ 0.61
CTSD-208ENST00000636843 NUTM2BA6NNL0 878 aaPredicted RBP18.84■□□□□ 0.61
CTSD-208ENST00000636843 NUTM2EB1AL46 878 aaPredicted RBP18.84■□□□□ 0.61
CTSD-208ENST00000636843 NUTM2AQ8IVF1 878 aaPredicted RBP18.84■□□□□ 0.61
CTSD-208ENST00000636843 PTCH1Q13635 1447 aa18.84■□□□□ 0.61
CTSD-208ENST00000636843 NHSL1Q5SYE7 1610 aa18.81■□□□□ 0.6
CTSD-208ENST00000636843 ROBO2Q9HCK4 1378 aa18.81■□□□□ 0.6
CTSD-208ENST00000636843 PRAG1Q86YV5 1406 aa18.81■□□□□ 0.6
CTSD-208ENST00000636843 C1orf167Q5SNV9 1468 aa18.8■□□□□ 0.6
CTSD-208ENST00000636843 RXRBP28702 533 aa18.79■□□□□ 0.6
CTSD-208ENST00000636843 DDX17Q92841 729 aaKnown RBP18.79■□□□□ 0.6
CTSD-208ENST00000636843 NALCNQ8IZF0 1738 aa18.79■□□□□ 0.6
CTSD-208ENST00000636843 AFF2P51816 1311 aa18.78■□□□□ 0.6
CTSD-208ENST00000636843 PNPLA6Q8IY17 1366 aa18.78■□□□□ 0.6
CTSD-208ENST00000636843 HRCP23327 699 aa18.77■□□□□ 0.6
CTSD-208ENST00000636843 SETD1AO15047 1707 aaKnown RBP18.77■□□□□ 0.59
CTSD-208ENST00000636843 FOXD1Q16676 465 aa18.75■□□□□ 0.59
CTSD-208ENST00000636843 CDK12Q9NYV4 1490 aaPredicted RBP18.74■□□□□ 0.59
CTSD-208ENST00000636843 CCDC144AA2RUR9 1427 aa18.74■□□□□ 0.59
CTSD-208ENST00000636843 PPLO60437 1756 aa18.74■□□□□ 0.59
CTSD-208ENST00000636843 SOS2Q07890 1332 aaPredicted RBP18.74■□□□□ 0.59
CTSD-208ENST00000636843 UPF1Q92900 1129 aaKnown RBP eCLIP18.74■□□□□ 0.594e-13■■■■■ 39.3
CTSD-208ENST00000636843 C8orf37Q96NL8 207 aa18.74■□□□□ 0.59
CTSD-208ENST00000636843 ORAI2Q96SN7 254 aa18.74■□□□□ 0.59
CTSD-208ENST00000636843 LAMC1P11047 1609 aa18.72■□□□□ 0.59
CTSD-208ENST00000636843 MPHOSPH9Q99550 1183 aa18.72■□□□□ 0.59
CTSD-208ENST00000636843 ANKRD30BQ9BXX2 1392 aa18.71■□□□□ 0.59
CTSD-208ENST00000636843 ADGRF5Q8IZF2 1346 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms