RNA–Protein interactions for RNA: ENST00000636366.1

PCCA-211, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 1,654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-211ENST00000636366 LOC105371045A0A1W2PR82 267 aa16.97■□□□□ 0.31
PCCA-211ENST00000636366 PTPN23Q9H3S7 1636 aa16.96■□□□□ 0.31
PCCA-211ENST00000636366 ADGRB3O60242 1522 aa16.96■□□□□ 0.31
PCCA-211ENST00000636366 HDGFP51858 240 aaKnown RBP16.96■□□□□ 0.31
PCCA-211ENST00000636366 SETD1AO15047 1707 aaKnown RBP16.95■□□□□ 0.3
PCCA-211ENST00000636366 PLEKHG1Q9ULL1 1385 aa16.94■□□□□ 0.3
PCCA-211ENST00000636366 SPATA31A6Q5VVP1 1343 aa16.93■□□□□ 0.3
PCCA-211ENST00000636366 ZNF772Q68DY9 489 aaPredicted RBP16.93■□□□□ 0.3
PCCA-211ENST00000636366 UPF1Q92900 1129 aaKnown RBP eCLIP16.93■□□□□ 0.3
PCCA-211ENST00000636366 TBX22Q9Y458 520 aa16.93■□□□□ 0.3
PCCA-211ENST00000636366 NCOA3Q9Y6Q9 1424 aa16.92■□□□□ 0.3
PCCA-211ENST00000636366 PPP1R15AO75807 674 aaPredicted RBP16.92■□□□□ 0.3
PCCA-211ENST00000636366 MEX3CQ5U5Q3 659 aaKnown RBP16.92■□□□□ 0.3
PCCA-211ENST00000636366 ZFYVE9O95405 1425 aa16.92■□□□□ 0.3
PCCA-211ENST00000636366 APLP2Q06481 763 aa16.91■□□□□ 0.3
PCCA-211ENST00000636366 CHD2O14647 1828 aaKnown RBP16.91■□□□□ 0.3
PCCA-211ENST00000636366 FGD6Q6ZV73 1430 aa16.91■□□□□ 0.3
PCCA-211ENST00000636366 COL16A1Q07092 1604 aaPredicted RBP16.91■□□□□ 0.3
PCCA-211ENST00000636366 RIMS2Q9UQ26 1411 aa16.9■□□□□ 0.3
PCCA-211ENST00000636366 C14orf37Q86TY3 774 aa16.9■□□□□ 0.3
PCCA-211ENST00000636366 TRIM52Q96A61 297 aa16.9■□□□□ 0.3
PCCA-211ENST00000636366 CADPS2Q86UW7 1296 aa16.89■□□□□ 0.29
PCCA-211ENST00000636366 LRP6O75581 1613 aa16.89■□□□□ 0.29
PCCA-211ENST00000636366 RPRD2Q5VT52 1461 aaKnown RBP16.88■□□□□ 0.29
PCCA-211ENST00000636366 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.88■□□□□ 0.29
PCCA-211ENST00000636366 C19orf44Q9H6X5 657 aa16.88■□□□□ 0.29
PCCA-211ENST00000636366 ATF3P18847 181 aa16.87■□□□□ 0.29
PCCA-211ENST00000636366 RXRBP28702 533 aa16.86■□□□□ 0.29
PCCA-211ENST00000636366 CHGAP10645 457 aaKnown RBP16.85■□□□□ 0.29
PCCA-211ENST00000636366 ADGRL2O95490 1459 aa16.84■□□□□ 0.29
PCCA-211ENST00000636366 MYO5BQ9ULV0 1848 aa16.84■□□□□ 0.29
PCCA-211ENST00000636366 TMEM131LA2VDJ0 1609 aa16.84■□□□□ 0.29
PCCA-211ENST00000636366 AHDC1Q5TGY3 1603 aaPredicted RBP16.84■□□□□ 0.29
PCCA-211ENST00000636366 PIK3R4Q99570 1358 aa16.83■□□□□ 0.29
PCCA-211ENST00000636366 NUTM2DQ5VT03 806 aaPredicted RBP16.83■□□□□ 0.28
PCCA-211ENST00000636366 ADAMTS13Q76LX8 1427 aa16.83■□□□□ 0.28
PCCA-211ENST00000636366 ANKRD50Q9ULJ7 1429 aa16.83■□□□□ 0.28
PCCA-211ENST00000636366 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.82■□□□□ 0.28
PCCA-211ENST00000636366 GCC2Q8IWJ2 1684 aa16.82■□□□□ 0.28
PCCA-211ENST00000636366 NUTM2BA6NNL0 878 aaPredicted RBP16.81■□□□□ 0.28
PCCA-211ENST00000636366 NUTM2EB1AL46 878 aaPredicted RBP16.81■□□□□ 0.28
PCCA-211ENST00000636366 BRINP3Q76B58 766 aa16.81■□□□□ 0.28
PCCA-211ENST00000636366 NUTM2AQ8IVF1 878 aaPredicted RBP16.81■□□□□ 0.28
PCCA-211ENST00000636366 SHPRHQ149N8 1683 aa16.81■□□□□ 0.28
PCCA-211ENST00000636366 AMOTL2Q9Y2J4 779 aa16.81■□□□□ 0.28
PCCA-211ENST00000636366 FAM50AQ14320 339 aaKnown RBP16.79■□□□□ 0.28
PCCA-211ENST00000636366 CDK12Q9NYV4 1490 aaPredicted RBP16.79■□□□□ 0.28
PCCA-211ENST00000636366 DIP2AQ14689 1571 aa16.78■□□□□ 0.28
PCCA-211ENST00000636366 AFF2P51816 1311 aa16.77■□□□□ 0.28
PCCA-211ENST00000636366 PTPRUQ92729 1446 aa16.76■□□□□ 0.27
PCCA-211ENST00000636366 LRRC59Q96AG4 307 aaKnown RBP16.75■□□□□ 0.27
PCCA-211ENST00000636366 TRPM2O94759 1503 aa16.74■□□□□ 0.27
PCCA-211ENST00000636366 SETD5Q9C0A6 1442 aa16.74■□□□□ 0.27
PCCA-211ENST00000636366 DCCP43146 1447 aa16.73■□□□□ 0.27
PCCA-211ENST00000636366 QTRT2Q9H974 415 aaKnown RBP16.73■□□□□ 0.27
PCCA-211ENST00000636366 RBM6P78332 1123 aaKnown RBP16.72■□□□□ 0.27
PCCA-211ENST00000636366 ASXL1Q8IXJ9 1541 aa16.71■□□□□ 0.27
PCCA-211ENST00000636366 C8orf37Q96NL8 207 aa16.71■□□□□ 0.27
PCCA-211ENST00000636366 MST1RQ04912 1400 aa16.71■□□□□ 0.27
PCCA-211ENST00000636366 UNC13BO14795 1591 aa16.71■□□□□ 0.26
PCCA-211ENST00000636366 E9PCH4 1651 aa16.7■□□□□ 0.26
PCCA-211ENST00000636366 RGS12O14924 1447 aa16.68■□□□□ 0.26
PCCA-211ENST00000636366 DDX17Q92841 729 aaKnown RBP16.68■□□□□ 0.26
PCCA-211ENST00000636366 NHSL1Q5SYE7 1610 aa16.67■□□□□ 0.26
PCCA-211ENST00000636366 PNPLA6Q8IY17 1366 aa16.66■□□□□ 0.26
PCCA-211ENST00000636366 NUP155O75694 1391 aa16.66■□□□□ 0.26
PCCA-211ENST00000636366 NGLY1Q96IV0 654 aa16.65■□□□□ 0.26
PCCA-211ENST00000636366 METP08581 1390 aa16.65■□□□□ 0.26
PCCA-211ENST00000636366 XRN1Q8IZH2 1706 aaKnown RBP16.65■□□□□ 0.26
PCCA-211ENST00000636366 IQGAP3Q86VI3 1631 aa16.65■□□□□ 0.26
PCCA-211ENST00000636366 ROCK1Q13464 1354 aa16.64■□□□□ 0.25
PCCA-211ENST00000636366 ZNF326Q5BKZ1 582 aaKnown RBP16.64■□□□□ 0.25
PCCA-211ENST00000636366 SETBP1Q9Y6X0 1596 aa16.64■□□□□ 0.25
PCCA-211ENST00000636366 NRXN3Q9Y4C0 1643 aa16.63■□□□□ 0.25
PCCA-211ENST00000636366 ADAMTS2O95450 1211 aa16.63■□□□□ 0.25
PCCA-211ENST00000636366 ADGRL3Q9HAR2 1447 aa16.62■□□□□ 0.25
PCCA-211ENST00000636366 ATAD2Q6PL18 1390 aa16.59■□□□□ 0.25
PCCA-211ENST00000636366 USP21Q9UK80 565 aa16.59■□□□□ 0.25
PCCA-211ENST00000636366 SRCAPQ6ZRS2 3230 aa16.59■□□□□ 0.25
PCCA-211ENST00000636366 C1orf167Q5SNV9 1468 aa16.59■□□□□ 0.25
PCCA-211ENST00000636366 TRPC5Q9UL62 973 aaPredicted RBP16.59■□□□□ 0.25
PCCA-211ENST00000636366 FOXD1Q16676 465 aa16.58■□□□□ 0.24
PCCA-211ENST00000636366 SOS2Q07890 1332 aaPredicted RBP16.58■□□□□ 0.24
PCCA-211ENST00000636366 FNBP4Q8N3X1 1017 aaPredicted RBP16.57■□□□□ 0.24
PCCA-211ENST00000636366 ORAI2Q96SN7 254 aa16.57■□□□□ 0.24
PCCA-211ENST00000636366 ZRANB1Q9UGI0 708 aa16.56■□□□□ 0.24
PCCA-211ENST00000636366 ITGAEP38570 1179 aa16.55■□□□□ 0.24
PCCA-211ENST00000636366 NALCNQ8IZF0 1738 aa16.55■□□□□ 0.24
PCCA-211ENST00000636366 PTCH1Q13635 1447 aa16.54■□□□□ 0.24
PCCA-211ENST00000636366 LAMC1P11047 1609 aa16.53■□□□□ 0.24
PCCA-211ENST00000636366 SPHKAPQ2M3C7 1700 aa16.53■□□□□ 0.24
PCCA-211ENST00000636366 CCDC125Q86Z20 511 aa16.53■□□□□ 0.24
PCCA-211ENST00000636366 ATRNO75882 1429 aa16.52■□□□□ 0.24
PCCA-211ENST00000636366 NEXMIFQ5QGS0 1516 aa16.51■□□□□ 0.23
PCCA-211ENST00000636366 VGFO15240 615 aaPredicted RBP16.5■□□□□ 0.23
PCCA-211ENST00000636366 ROBO2Q9HCK4 1378 aa16.5■□□□□ 0.23
PCCA-211ENST00000636366 CLTCL1P53675 1640 aa16.47■□□□□ 0.23
PCCA-211ENST00000636366 COL22A1Q8NFW1 1626 aaPredicted RBP16.46■□□□□ 0.23
PCCA-211ENST00000636366 NPHP3Q7Z494 1330 aa16.46■□□□□ 0.23
PCCA-211ENST00000636366 ESCO1Q5FWF5 840 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms