RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 NFXL1Q6ZNB6 911 aa19.55■□□□□ 0.72
CACNA1A-221ENST00000636012 CCDC70Q6NSX1 233 aa19.55■□□□□ 0.72
CACNA1A-221ENST00000636012 ZNF771Q7L3S4 317 aaPredicted RBP19.55■□□□□ 0.72
CACNA1A-221ENST00000636012 RBM33Q96EV2 1170 aaKnown RBP19.53■□□□□ 0.72
CACNA1A-221ENST00000636012 MINK1Q8N4C8 1332 aaPredicted RBP19.53■□□□□ 0.72
CACNA1A-221ENST00000636012 ANO2Q9NQ90 1003 aa19.53■□□□□ 0.72
CACNA1A-221ENST00000636012 DCAF8L1A6NGE4 600 aa19.52■□□□□ 0.72
CACNA1A-221ENST00000636012 CPLX2Q6PUV4 134 aaKnown RBP19.52■□□□□ 0.72
CACNA1A-221ENST00000636012 ERICH2A1L162 156 aa19.52■□□□□ 0.71
CACNA1A-221ENST00000636012 TIMELESSQ9UNS1 1208 aa19.52■□□□□ 0.71
CACNA1A-221ENST00000636012 MAP7D2Q96T17 732 aa19.52■□□□□ 0.71
CACNA1A-221ENST00000636012 TDRD9Q8NDG6 1382 aaKnown RBP19.52■□□□□ 0.71
CACNA1A-221ENST00000636012 ZFYVE27Q5T4F4 411 aa19.51■□□□□ 0.71
CACNA1A-221ENST00000636012 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.51■□□□□ 0.71
CACNA1A-221ENST00000636012 CECR2Q9BXF3 1484 aa19.51■□□□□ 0.71
CACNA1A-221ENST00000636012 TRDNQ13061 729 aa19.51■□□□□ 0.71
CACNA1A-221ENST00000636012 PANK3Q9H999 370 aa19.51■□□□□ 0.71
CACNA1A-221ENST00000636012 PDS5BQ9NTI5 1447 aa19.51■□□□□ 0.71
CACNA1A-221ENST00000636012 CYB5RLQ6IPT4 315 aa19.51■□□□□ 0.71
CACNA1A-221ENST00000636012 IFIT2P09913 472 aaKnown RBP19.5■□□□□ 0.71
CACNA1A-221ENST00000636012 CCDC27Q2M243 656 aa19.5■□□□□ 0.71
CACNA1A-221ENST00000636012 FMN1Q68DA7 1419 aa19.5■□□□□ 0.71
CACNA1A-221ENST00000636012 CCDC47Q96A33 483 aaKnown RBP19.5■□□□□ 0.71
CACNA1A-221ENST00000636012 MTMR7Q9Y216 660 aa19.5■□□□□ 0.71
CACNA1A-221ENST00000636012 CPLX1O14810 134 aa19.5■□□□□ 0.71
CACNA1A-221ENST00000636012 PLIN1O60240 522 aa19.49■□□□□ 0.71
CACNA1A-221ENST00000636012 CGNL1Q0VF96 1302 aa19.49■□□□□ 0.71
CACNA1A-221ENST00000636012 WDR70Q9NW82 654 aa19.49■□□□□ 0.71
CACNA1A-221ENST00000636012 EVC2Q86UK5 1308 aa19.48■□□□□ 0.71
CACNA1A-221ENST00000636012 CHMP4CQ96CF2 233 aa19.47■□□□□ 0.71
CACNA1A-221ENST00000636012 ODF2Q5BJF6 829 aa19.47■□□□□ 0.71
CACNA1A-221ENST00000636012 RUFY2Q8WXA3 655 aa19.47■□□□□ 0.71
CACNA1A-221ENST00000636012 PPP1R1BQ9UD71 204 aaPredicted RBP19.47■□□□□ 0.71
CACNA1A-221ENST00000636012 ATP6V1DQ9Y5K8 247 aa19.47■□□□□ 0.71
CACNA1A-221ENST00000636012 DDX49Q9Y6V7 483 aaKnown RBP19.47■□□□□ 0.71
CACNA1A-221ENST00000636012 NLRP13Q86W25 1043 aa19.47■□□□□ 0.71
CACNA1A-221ENST00000636012 CCDC18Q5T9S5 1454 aa19.47■□□□□ 0.71
CACNA1A-221ENST00000636012 NAP1L1P55209 391 aaKnown RBP19.47■□□□□ 0.71
CACNA1A-221ENST00000636012 PPM1FP49593 454 aaPredicted RBP19.47■□□□□ 0.71
CACNA1A-221ENST00000636012 L3MBTL2Q969R5 705 aa19.46■□□□□ 0.71
CACNA1A-221ENST00000636012 DDX11L8A8MPP1 907 aa19.46■□□□□ 0.71
CACNA1A-221ENST00000636012 ANKRD20A12PQ8NF67 263 aa19.46■□□□□ 0.71
CACNA1A-221ENST00000636012 IPO9Q96P70 1041 aaKnown RBP19.46■□□□□ 0.71
CACNA1A-221ENST00000636012 IPO7O95373 1038 aaKnown RBP19.46■□□□□ 0.71
CACNA1A-221ENST00000636012 DDX58O95786 925 aaKnown RBP19.46■□□□□ 0.71
CACNA1A-221ENST00000636012 HOOK1Q9UJC3 728 aaKnown RBP19.45■□□□□ 0.7
CACNA1A-221ENST00000636012 KIF15Q9NS87 1388 aa19.45■□□□□ 0.7
CACNA1A-221ENST00000636012 CT47A1Q5JQC4 288 aaPredicted RBP19.45■□□□□ 0.7
CACNA1A-221ENST00000636012 IKQ13123 557 aaPredicted RBP19.45■□□□□ 0.7
CACNA1A-221ENST00000636012 ATF3P18847 181 aa19.45■□□□□ 0.7
CACNA1A-221ENST00000636012 KDM4AO75164 1064 aa19.44■□□□□ 0.7
CACNA1A-221ENST00000636012 AIMP1Q12904 312 aaKnown RBP19.44■□□□□ 0.7
CACNA1A-221ENST00000636012 CCDC144AA2RUR9 1427 aa19.43■□□□□ 0.7
CACNA1A-221ENST00000636012 ZKSCAN1P17029 563 aaPredicted RBP19.43■□□□□ 0.7
CACNA1A-221ENST00000636012 G3BP1Q13283 466 aaKnown RBP eCLIP19.43■□□□□ 0.7
CACNA1A-221ENST00000636012 CCDC97Q96F63 343 aaPredicted RBP19.43■□□□□ 0.7
CACNA1A-221ENST00000636012 R3HCC1Q9Y3T6 440 aaKnown RBP19.43■□□□□ 0.7
CACNA1A-221ENST00000636012 EPS15P42566 896 aa19.43■□□□□ 0.7
CACNA1A-221ENST00000636012 SLC4A3P48751 1232 aa19.43■□□□□ 0.7
CACNA1A-221ENST00000636012 UACAQ9BZF9 1416 aa19.42■□□□□ 0.7
CACNA1A-221ENST00000636012 NUTM2GQ5VZR2 741 aa19.41■□□□□ 0.7
CACNA1A-221ENST00000636012 BICD2Q8TD16 824 aa19.41■□□□□ 0.7
CACNA1A-221ENST00000636012 ZKSCAN2Q63HK3 967 aa19.41■□□□□ 0.7
CACNA1A-221ENST00000636012 ST20-MTHFSA0A0A6YYL1 179 aa19.41■□□□□ 0.7
CACNA1A-221ENST00000636012 CCAR1Q8IX12 1150 aaKnown RBP19.41■□□□□ 0.7
CACNA1A-221ENST00000636012 RIC3Q7Z5B4 369 aa19.41■□□□□ 0.7
CACNA1A-221ENST00000636012 HOMER1Q86YM7 354 aa19.4■□□□□ 0.7
CACNA1A-221ENST00000636012 TMEM132AQ24JP5 1023 aa19.4■□□□□ 0.7
CACNA1A-221ENST00000636012 VPS8Q8N3P4 1428 aa19.4■□□□□ 0.7
CACNA1A-221ENST00000636012 VGFO15240 615 aaPredicted RBP19.4■□□□□ 0.7
CACNA1A-221ENST00000636012 GPS2Q13227 327 aa19.4■□□□□ 0.7
CACNA1A-221ENST00000636012 FKBP5Q13451 457 aaPredicted RBP19.4■□□□□ 0.7
CACNA1A-221ENST00000636012 NEUROD6Q96NK8 337 aa19.4■□□□□ 0.7
CACNA1A-221ENST00000636012 PHLDB1Q86UU1 1377 aa19.4■□□□□ 0.7
CACNA1A-221ENST00000636012 FAM177BA6PVY3 158 aa19.39■□□□□ 0.7
CACNA1A-221ENST00000636012 WIZO95785 1651 aa19.38■□□□□ 0.69
CACNA1A-221ENST00000636012 COG6Q9Y2V7 657 aa19.38■□□□□ 0.69
CACNA1A-221ENST00000636012 RIPK4P57078 832 aa19.37■□□□□ 0.69
CACNA1A-221ENST00000636012 RNF20Q5VTR2 975 aa19.37■□□□□ 0.69
CACNA1A-221ENST00000636012 MYBBP1AQ9BQG0 1328 aaKnown RBP19.37■□□□□ 0.69
CACNA1A-221ENST00000636012 CENPQQ7L2Z9 268 aaPredicted RBP19.37■□□□□ 0.69
CACNA1A-221ENST00000636012 CRBNQ96SW2 442 aa19.37■□□□□ 0.69
CACNA1A-221ENST00000636012 HSP90AB2PQ58FF8 381 aa19.37■□□□□ 0.69
CACNA1A-221ENST00000636012 RSPH4AQ5TD94 716 aa19.37■□□□□ 0.69
CACNA1A-221ENST00000636012 WASHC4Q2M389 1173 aa19.36■□□□□ 0.69
CACNA1A-221ENST00000636012 SMARCA2P51531 1590 aa19.36■□□□□ 0.69
CACNA1A-221ENST00000636012 TSPYL4Q9UJ04 414 aa19.36■□□□□ 0.69
CACNA1A-221ENST00000636012 HMOX1P09601 288 aa19.36■□□□□ 0.69
CACNA1A-221ENST00000636012 FHOD3Q2V2M9 1422 aa19.36■□□□□ 0.69
CACNA1A-221ENST00000636012 HSP90AA2PQ14568 343 aaPredicted RBP19.35■□□□□ 0.69
CACNA1A-221ENST00000636012 VPS37CA5D8V6 355 aaPredicted RBP19.35■□□□□ 0.69
CACNA1A-221ENST00000636012 PDE3BQ13370 1112 aa19.35■□□□□ 0.69
CACNA1A-221ENST00000636012 SAFBQ15424 915 aaKnown RBP eCLIP19.35■□□□□ 0.69
CACNA1A-221ENST00000636012 JPH4Q96JJ6 628 aa19.35■□□□□ 0.69
CACNA1A-221ENST00000636012 E9PSI1 815 aa19.35■□□□□ 0.69
CACNA1A-221ENST00000636012 REC8O95072 547 aa19.35■□□□□ 0.69
CACNA1A-221ENST00000636012 IBSPP21815 317 aaPredicted RBP19.35■□□□□ 0.69
CACNA1A-221ENST00000636012 RAPGEF4Q8WZA2 1011 aa19.35■□□□□ 0.69
CACNA1A-221ENST00000636012 CCDC88BA6NC98 1476 aa19.34■□□□□ 0.69
CACNA1A-221ENST00000636012 DIAPH1O60610 1272 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms