RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 NFXL1Q6ZNB6 911 aa19.55■□□□□ 0.72
CACNA1A-221ENST00000636012 CCDC70Q6NSX1 233 aa19.55■□□□□ 0.72
CACNA1A-221ENST00000636012 ZNF771Q7L3S4 317 aaPredicted RBP19.55■□□□□ 0.72
CACNA1A-221ENST00000636012 RBM33Q96EV2 1170 aaKnown RBP19.53■□□□□ 0.72
CACNA1A-221ENST00000636012 MINK1Q8N4C8 1332 aaPredicted RBP19.53■□□□□ 0.72
CACNA1A-221ENST00000636012 ANO2Q9NQ90 1003 aa19.53■□□□□ 0.72
CACNA1A-221ENST00000636012 DCAF8L1A6NGE4 600 aa19.52■□□□□ 0.72
CACNA1A-221ENST00000636012 CPLX2Q6PUV4 134 aaKnown RBP19.52■□□□□ 0.72
CACNA1A-221ENST00000636012 ERICH2A1L162 156 aa19.52■□□□□ 0.71
CACNA1A-221ENST00000636012 TIMELESSQ9UNS1 1208 aa19.52■□□□□ 0.71
CACNA1A-221ENST00000636012 MAP7D2Q96T17 732 aa19.52■□□□□ 0.71
CACNA1A-221ENST00000636012 TDRD9Q8NDG6 1382 aaKnown RBP19.52■□□□□ 0.71
CACNA1A-221ENST00000636012 ZFYVE27Q5T4F4 411 aa19.51■□□□□ 0.71
CACNA1A-221ENST00000636012 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.51■□□□□ 0.71
CACNA1A-221ENST00000636012 CECR2Q9BXF3 1484 aa19.51■□□□□ 0.71
CACNA1A-221ENST00000636012 TRDNQ13061 729 aa19.51■□□□□ 0.71
CACNA1A-221ENST00000636012 PANK3Q9H999 370 aa19.51■□□□□ 0.71
CACNA1A-221ENST00000636012 PDS5BQ9NTI5 1447 aa19.51■□□□□ 0.71
CACNA1A-221ENST00000636012 CYB5RLQ6IPT4 315 aa19.51■□□□□ 0.71
CACNA1A-221ENST00000636012 IFIT2P09913 472 aaKnown RBP19.5■□□□□ 0.71
CACNA1A-221ENST00000636012 CCDC27Q2M243 656 aa19.5■□□□□ 0.71
CACNA1A-221ENST00000636012 FMN1Q68DA7 1419 aa19.5■□□□□ 0.71
CACNA1A-221ENST00000636012 CCDC47Q96A33 483 aaKnown RBP19.5■□□□□ 0.71
CACNA1A-221ENST00000636012 MTMR7Q9Y216 660 aa19.5■□□□□ 0.71
CACNA1A-221ENST00000636012 CPLX1O14810 134 aa19.5■□□□□ 0.71
CACNA1A-221ENST00000636012 PLIN1O60240 522 aa19.49■□□□□ 0.71
CACNA1A-221ENST00000636012 CGNL1Q0VF96 1302 aa19.49■□□□□ 0.71
CACNA1A-221ENST00000636012 WDR70Q9NW82 654 aa19.49■□□□□ 0.71
CACNA1A-221ENST00000636012 EVC2Q86UK5 1308 aa19.48■□□□□ 0.71
CACNA1A-221ENST00000636012 CHMP4CQ96CF2 233 aa19.47■□□□□ 0.71
CACNA1A-221ENST00000636012 ODF2Q5BJF6 829 aa19.47■□□□□ 0.71
CACNA1A-221ENST00000636012 RUFY2Q8WXA3 655 aa19.47■□□□□ 0.71
CACNA1A-221ENST00000636012 PPP1R1BQ9UD71 204 aaPredicted RBP19.47■□□□□ 0.71
CACNA1A-221ENST00000636012 ATP6V1DQ9Y5K8 247 aa19.47■□□□□ 0.71
CACNA1A-221ENST00000636012 DDX49Q9Y6V7 483 aaKnown RBP19.47■□□□□ 0.71
CACNA1A-221ENST00000636012 NLRP13Q86W25 1043 aa19.47■□□□□ 0.71
CACNA1A-221ENST00000636012 CCDC18Q5T9S5 1454 aa19.47■□□□□ 0.71
CACNA1A-221ENST00000636012 NAP1L1P55209 391 aaKnown RBP19.47■□□□□ 0.71
CACNA1A-221ENST00000636012 PPM1FP49593 454 aaPredicted RBP19.47■□□□□ 0.71
CACNA1A-221ENST00000636012 L3MBTL2Q969R5 705 aa19.46■□□□□ 0.71
CACNA1A-221ENST00000636012 DDX11L8A8MPP1 907 aa19.46■□□□□ 0.71
CACNA1A-221ENST00000636012 ANKRD20A12PQ8NF67 263 aa19.46■□□□□ 0.71
CACNA1A-221ENST00000636012 IPO9Q96P70 1041 aaKnown RBP19.46■□□□□ 0.71
CACNA1A-221ENST00000636012 IPO7O95373 1038 aaKnown RBP19.46■□□□□ 0.71
CACNA1A-221ENST00000636012 DDX58O95786 925 aaKnown RBP19.46■□□□□ 0.71
CACNA1A-221ENST00000636012 HOOK1Q9UJC3 728 aaKnown RBP19.45■□□□□ 0.7
CACNA1A-221ENST00000636012 KIF15Q9NS87 1388 aa19.45■□□□□ 0.7
CACNA1A-221ENST00000636012 CT47A1Q5JQC4 288 aaPredicted RBP19.45■□□□□ 0.7
CACNA1A-221ENST00000636012 IKQ13123 557 aaPredicted RBP19.45■□□□□ 0.7
CACNA1A-221ENST00000636012 ATF3P18847 181 aa19.45■□□□□ 0.7
CACNA1A-221ENST00000636012 KDM4AO75164 1064 aa19.44■□□□□ 0.7
CACNA1A-221ENST00000636012 AIMP1Q12904 312 aaKnown RBP19.44■□□□□ 0.7
CACNA1A-221ENST00000636012 CCDC144AA2RUR9 1427 aa19.43■□□□□ 0.7
CACNA1A-221ENST00000636012 ZKSCAN1P17029 563 aaPredicted RBP19.43■□□□□ 0.7
CACNA1A-221ENST00000636012 G3BP1Q13283 466 aaKnown RBP eCLIP19.43■□□□□ 0.7
CACNA1A-221ENST00000636012 CCDC97Q96F63 343 aaPredicted RBP19.43■□□□□ 0.7
CACNA1A-221ENST00000636012 R3HCC1Q9Y3T6 440 aaKnown RBP19.43■□□□□ 0.7
CACNA1A-221ENST00000636012 EPS15P42566 896 aa19.43■□□□□ 0.7
CACNA1A-221ENST00000636012 SLC4A3P48751 1232 aa19.43■□□□□ 0.7
CACNA1A-221ENST00000636012 UACAQ9BZF9 1416 aa19.42■□□□□ 0.7
CACNA1A-221ENST00000636012 NUTM2GQ5VZR2 741 aa19.41■□□□□ 0.7
CACNA1A-221ENST00000636012 BICD2Q8TD16 824 aa19.41■□□□□ 0.7
CACNA1A-221ENST00000636012 ZKSCAN2Q63HK3 967 aa19.41■□□□□ 0.7
CACNA1A-221ENST00000636012 ST20-MTHFSA0A0A6YYL1 179 aa19.41■□□□□ 0.7
CACNA1A-221ENST00000636012 CCAR1Q8IX12 1150 aaKnown RBP19.41■□□□□ 0.7
CACNA1A-221ENST00000636012 RIC3Q7Z5B4 369 aa19.41■□□□□ 0.7
CACNA1A-221ENST00000636012 HOMER1Q86YM7 354 aa19.4■□□□□ 0.7
CACNA1A-221ENST00000636012 TMEM132AQ24JP5 1023 aa19.4■□□□□ 0.7
CACNA1A-221ENST00000636012 VPS8Q8N3P4 1428 aa19.4■□□□□ 0.7
CACNA1A-221ENST00000636012 VGFO15240 615 aaPredicted RBP19.4■□□□□ 0.7
CACNA1A-221ENST00000636012 GPS2Q13227 327 aa19.4■□□□□ 0.7
CACNA1A-221ENST00000636012 FKBP5Q13451 457 aaPredicted RBP19.4■□□□□ 0.7
CACNA1A-221ENST00000636012 NEUROD6Q96NK8 337 aa19.4■□□□□ 0.7
CACNA1A-221ENST00000636012 PHLDB1Q86UU1 1377 aa19.4■□□□□ 0.7
CACNA1A-221ENST00000636012 FAM177BA6PVY3 158 aa19.39■□□□□ 0.7
CACNA1A-221ENST00000636012 WIZO95785 1651 aa19.38■□□□□ 0.69
CACNA1A-221ENST00000636012 COG6Q9Y2V7 657 aa19.38■□□□□ 0.69
CACNA1A-221ENST00000636012 RIPK4P57078 832 aa19.37■□□□□ 0.69
CACNA1A-221ENST00000636012 RNF20Q5VTR2 975 aa19.37■□□□□ 0.69
CACNA1A-221ENST00000636012 MYBBP1AQ9BQG0 1328 aaKnown RBP19.37■□□□□ 0.69
CACNA1A-221ENST00000636012 CENPQQ7L2Z9 268 aaPredicted RBP19.37■□□□□ 0.69
CACNA1A-221ENST00000636012 CRBNQ96SW2 442 aa19.37■□□□□ 0.69
CACNA1A-221ENST00000636012 HSP90AB2PQ58FF8 381 aa19.37■□□□□ 0.69
CACNA1A-221ENST00000636012 RSPH4AQ5TD94 716 aa19.37■□□□□ 0.69
CACNA1A-221ENST00000636012 WASHC4Q2M389 1173 aa19.36■□□□□ 0.69
CACNA1A-221ENST00000636012 SMARCA2P51531 1590 aa19.36■□□□□ 0.69
CACNA1A-221ENST00000636012 TSPYL4Q9UJ04 414 aa19.36■□□□□ 0.69
CACNA1A-221ENST00000636012 HMOX1P09601 288 aa19.36■□□□□ 0.69
CACNA1A-221ENST00000636012 FHOD3Q2V2M9 1422 aa19.36■□□□□ 0.69
CACNA1A-221ENST00000636012 HSP90AA2PQ14568 343 aaPredicted RBP19.35■□□□□ 0.69
CACNA1A-221ENST00000636012 VPS37CA5D8V6 355 aaPredicted RBP19.35■□□□□ 0.69
CACNA1A-221ENST00000636012 PDE3BQ13370 1112 aa19.35■□□□□ 0.69
CACNA1A-221ENST00000636012 SAFBQ15424 915 aaKnown RBP eCLIP19.35■□□□□ 0.69
CACNA1A-221ENST00000636012 JPH4Q96JJ6 628 aa19.35■□□□□ 0.69
CACNA1A-221ENST00000636012 E9PSI1 815 aa19.35■□□□□ 0.69
CACNA1A-221ENST00000636012 REC8O95072 547 aa19.35■□□□□ 0.69
CACNA1A-221ENST00000636012 IBSPP21815 317 aaPredicted RBP19.35■□□□□ 0.69
CACNA1A-221ENST00000636012 RAPGEF4Q8WZA2 1011 aa19.35■□□□□ 0.69
CACNA1A-221ENST00000636012 CCDC88BA6NC98 1476 aa19.34■□□□□ 0.69
CACNA1A-221ENST00000636012 DIAPH1O60610 1272 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms