RNA–Protein interactions for RNA: ENST00000633087.1

GRAMD1B-212, Transcript of GRAM domain containing 1B, humanhuman

TSL 4

Gene GRAMD1B, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-212ENST00000633087 LRRC7Q96NW7 1537 aa22.63■■□□□ 1.21
GRAMD1B-212ENST00000633087 UBAP1LF5GYI3 381 aa22.62■■□□□ 1.21
GRAMD1B-212ENST00000633087 HDGFP51858 240 aaKnown RBP22.62■■□□□ 1.21
GRAMD1B-212ENST00000633087 PLEKHG1Q9ULL1 1385 aa22.62■■□□□ 1.21
GRAMD1B-212ENST00000633087 NWD1Q149M9 1564 aa22.61■■□□□ 1.21
GRAMD1B-212ENST00000633087 TRIM52Q96A61 297 aa22.61■■□□□ 1.21
GRAMD1B-212ENST00000633087 PPP1R15AO75807 674 aaPredicted RBP22.6■■□□□ 1.21
GRAMD1B-212ENST00000633087 CHD2O14647 1828 aaKnown RBP22.59■■□□□ 1.21
GRAMD1B-212ENST00000633087 DIP2AQ14689 1571 aa22.59■■□□□ 1.21
GRAMD1B-212ENST00000633087 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.58■■□□□ 1.21
GRAMD1B-212ENST00000633087 BCANQ96GW7 911 aa22.57■■□□□ 1.2
GRAMD1B-212ENST00000633087 SLC26A8Q96RN1 970 aa22.56■■□□□ 1.2
GRAMD1B-212ENST00000633087 NKTRP30414 1462 aaKnown RBP22.55■■□□□ 1.2
GRAMD1B-212ENST00000633087 SLC4A1APQ9BWU0 796 aaKnown RBP22.55■■□□□ 1.2
GRAMD1B-212ENST00000633087 ALKQ9UM73 1620 aa22.54■■□□□ 1.2
GRAMD1B-212ENST00000633087 TOM1O60784 492 aa22.54■■□□□ 1.2
GRAMD1B-212ENST00000633087 KCNA6P17658 529 aa22.51■■□□□ 1.19
GRAMD1B-212ENST00000633087 NEXMIFQ5QGS0 1516 aa22.51■■□□□ 1.19
GRAMD1B-212ENST00000633087 NRXN3Q9Y4C0 1643 aa22.5■■□□□ 1.19
GRAMD1B-212ENST00000633087 SENP3Q9H4L4 574 aaPredicted RBP22.5■■□□□ 1.19
GRAMD1B-212ENST00000633087 SETBP1Q9Y6X0 1596 aa22.5■■□□□ 1.19
GRAMD1B-212ENST00000633087 ADAMTS13Q76LX8 1427 aa22.49■■□□□ 1.19
GRAMD1B-212ENST00000633087 SETD5Q9C0A6 1442 aa22.49■■□□□ 1.19
GRAMD1B-212ENST00000633087 ZNF326Q5BKZ1 582 aaKnown RBP22.49■■□□□ 1.19
GRAMD1B-212ENST00000633087 NUTM2DQ5VT03 806 aaPredicted RBP22.49■■□□□ 1.19
GRAMD1B-212ENST00000633087 SCAF1Q9H7N4 1312 aaKnown RBP22.49■■□□□ 1.19
GRAMD1B-212ENST00000633087 ACIN1Q9UKV3 1341 aaKnown RBP22.48■■□□□ 1.19
GRAMD1B-212ENST00000633087 PIP4K2BP78356 416 aa22.47■■□□□ 1.19
GRAMD1B-212ENST00000633087 PPLO60437 1756 aa22.46■■□□□ 1.19
GRAMD1B-212ENST00000633087 TBX22Q9Y458 520 aa22.46■■□□□ 1.19
GRAMD1B-212ENST00000633087 TMEM94Q12767 1356 aa22.45■■□□□ 1.18
GRAMD1B-212ENST00000633087 PIK3R4Q99570 1358 aa22.44■■□□□ 1.18
GRAMD1B-212ENST00000633087 CCDC144AA2RUR9 1427 aa22.41■■□□□ 1.18
GRAMD1B-212ENST00000633087 RAB3GAP2Q9H2M9 1393 aa22.41■■□□□ 1.18
GRAMD1B-212ENST00000633087 XRN1Q8IZH2 1706 aaKnown RBP22.41■■□□□ 1.18
GRAMD1B-212ENST00000633087 PROSER2Q86WR7 435 aaPredicted RBP22.41■■□□□ 1.18
GRAMD1B-212ENST00000633087 MPHOSPH9Q99550 1183 aa22.41■■□□□ 1.18
GRAMD1B-212ENST00000633087 FOXD1Q16676 465 aa22.4■■□□□ 1.18
GRAMD1B-212ENST00000633087 IFT172Q9UG01 1749 aa22.39■■□□□ 1.17
GRAMD1B-212ENST00000633087 SETD1AO15047 1707 aaKnown RBP22.38■■□□□ 1.17
GRAMD1B-212ENST00000633087 MSH6P52701 1360 aa22.37■■□□□ 1.17
GRAMD1B-212ENST00000633087 NCOA3Q9Y6Q9 1424 aa22.35■■□□□ 1.17
GRAMD1B-212ENST00000633087 HSPA1LP34931 641 aa22.35■■□□□ 1.17
GRAMD1B-212ENST00000633087 RBM33Q96EV2 1170 aaKnown RBP22.35■■□□□ 1.17
GRAMD1B-212ENST00000633087 RPGRIP1LQ68CZ1 1315 aa22.34■■□□□ 1.17
GRAMD1B-212ENST00000633087 PTPRUQ92729 1446 aa22.34■■□□□ 1.17
GRAMD1B-212ENST00000633087 ROBO1Q9Y6N7 1651 aa22.34■■□□□ 1.17
GRAMD1B-212ENST00000633087 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.33■■□□□ 1.17
GRAMD1B-212ENST00000633087 VGFO15240 615 aaPredicted RBP22.32■■□□□ 1.16
GRAMD1B-212ENST00000633087 SPATA31E1Q6ZUB1 1445 aa22.31■■□□□ 1.16
GRAMD1B-212ENST00000633087 METP08581 1390 aa22.3■■□□□ 1.16
GRAMD1B-212ENST00000633087 AMOTL2Q9Y2J4 779 aa22.3■■□□□ 1.16
GRAMD1B-212ENST00000633087 FAM135BQ49AJ0 1406 aa22.29■■□□□ 1.16
GRAMD1B-212ENST00000633087 DISP3Q9P2K9 1392 aa22.27■■□□□ 1.16
GRAMD1B-212ENST00000633087 C14orf37Q86TY3 774 aa22.27■■□□□ 1.16
GRAMD1B-212ENST00000633087 NALCNQ8IZF0 1738 aa22.25■■□□□ 1.15
GRAMD1B-212ENST00000633087 ANKRD30BQ9BXX2 1392 aa22.25■■□□□ 1.15
GRAMD1B-212ENST00000633087 HRCP23327 699 aa22.24■■□□□ 1.15
GRAMD1B-212ENST00000633087 MED1Q15648 1581 aaPredicted RBP22.24■■□□□ 1.15
GRAMD1B-212ENST00000633087 DCCP43146 1447 aa22.23■■□□□ 1.15
GRAMD1B-212ENST00000633087 RGL3Q3MIN7 710 aa22.22■■□□□ 1.15
GRAMD1B-212ENST00000633087 PHLPP1O60346 1717 aa22.22■■□□□ 1.15
GRAMD1B-212ENST00000633087 PTCH1Q13635 1447 aa22.22■■□□□ 1.15
GRAMD1B-212ENST00000633087 C19orf44Q9H6X5 657 aa22.21■■□□□ 1.15
GRAMD1B-212ENST00000633087 PRAG1Q86YV5 1406 aa22.21■■□□□ 1.15
GRAMD1B-212ENST00000633087 CADPS2Q86UW7 1296 aa22.2■■□□□ 1.14
GRAMD1B-212ENST00000633087 SLAIN2Q9P270 581 aa22.19■■□□□ 1.14
GRAMD1B-212ENST00000633087 LAMC1P11047 1609 aa22.19■■□□□ 1.14
GRAMD1B-212ENST00000633087 KNDC1Q76NI1 1749 aa22.18■■□□□ 1.14
GRAMD1B-212ENST00000633087 MYOM2P54296 1465 aa22.18■■□□□ 1.14
GRAMD1B-212ENST00000633087 PIK3C2GO75747 1445 aa22.18■■□□□ 1.14
GRAMD1B-212ENST00000633087 ADGRL3Q9HAR2 1447 aa22.18■■□□□ 1.14
GRAMD1B-212ENST00000633087 ADGRF5Q8IZF2 1346 aa22.18■■□□□ 1.14
GRAMD1B-212ENST00000633087 ATF3P18847 181 aa22.18■■□□□ 1.14
GRAMD1B-212ENST00000633087 ASXL1Q8IXJ9 1541 aa22.14■■□□□ 1.13
GRAMD1B-212ENST00000633087 NRXN1Q9ULB1 1477 aa22.14■■□□□ 1.13
GRAMD1B-212ENST00000633087 COL16A1Q07092 1604 aaPredicted RBP22.13■■□□□ 1.13
GRAMD1B-212ENST00000633087 AHDC1Q5TGY3 1603 aaPredicted RBP22.13■■□□□ 1.13
GRAMD1B-212ENST00000633087 ROBO2Q9HCK4 1378 aa22.12■■□□□ 1.13
GRAMD1B-212ENST00000633087 MST1RQ04912 1400 aa22.11■■□□□ 1.13
GRAMD1B-212ENST00000633087 NHSL1Q5SYE7 1610 aa22.09■■□□□ 1.13
GRAMD1B-212ENST00000633087 TECPR2O15040 1411 aa22.09■■□□□ 1.13
GRAMD1B-212ENST00000633087 CDC42BPGQ6DT37 1551 aa22.07■■□□□ 1.12
GRAMD1B-212ENST00000633087 LRPPRCP42704 1394 aaKnown RBP22.06■■□□□ 1.12
GRAMD1B-212ENST00000633087 SHPRHQ149N8 1683 aa22.05■■□□□ 1.12
GRAMD1B-212ENST00000633087 BRINP3Q76B58 766 aa22.04■■□□□ 1.12
GRAMD1B-212ENST00000633087 YTHDC2Q9H6S0 1430 aaKnown RBP22.04■■□□□ 1.12
GRAMD1B-212ENST00000633087 ABCC11Q96J66 1382 aa22.02■■□□□ 1.12
GRAMD1B-212ENST00000633087 JCADQ9P266 1359 aa22.02■■□□□ 1.12
GRAMD1B-212ENST00000633087 PHF23Q9BUL5 403 aaPredicted RBP22.02■■□□□ 1.12
GRAMD1B-212ENST00000633087 C14orf93Q9H972 538 aaKnown RBP22.02■■□□□ 1.12
GRAMD1B-212ENST00000633087 TMEM132EQ6IEE7 984 aa22.01■■□□□ 1.11
GRAMD1B-212ENST00000633087 ILDR2Q71H61 639 aa22.01■■□□□ 1.11
GRAMD1B-212ENST00000633087 STK26Q9P289 416 aa22.01■■□□□ 1.11
GRAMD1B-212ENST00000633087 C1orf167Q5SNV9 1468 aa22.01■■□□□ 1.11
GRAMD1B-212ENST00000633087 CFAP70Q5T0N1 1121 aa21.98■■□□□ 1.11
GRAMD1B-212ENST00000633087 ADGRB1O14514 1584 aa21.98■■□□□ 1.11
GRAMD1B-212ENST00000633087 DHX57Q6P158 1386 aaKnown RBP21.98■■□□□ 1.11
GRAMD1B-212ENST00000633087 FMN2Q9NZ56 1722 aa21.97■■□□□ 1.11
GRAMD1B-212ENST00000633087 DCAF11Q8TEB1 546 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms