RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 DPH6Q7L8W6 267 aa6.61□□□□□ -1.35
SDCBP-213ENST00000630925 MORC4Q8TE76 937 aa6.61□□□□□ -1.35
SDCBP-213ENST00000630925 KLHL42Q9P2K6 505 aa6.61□□□□□ -1.35
SDCBP-213ENST00000630925 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.61□□□□□ -1.35
SDCBP-213ENST00000630925 CALR3Q96L12 384 aaKnown RBP6.61□□□□□ -1.35
SDCBP-213ENST00000630925 ANO8Q9HCE9 1232 aaPredicted RBP6.61□□□□□ -1.35
SDCBP-213ENST00000630925 SCRIBQ14160 1630 aa6.6□□□□□ -1.35
SDCBP-213ENST00000630925 SPDYE5A6NIY4 337 aa6.6□□□□□ -1.35
SDCBP-213ENST00000630925 PEX14O75381 377 aa6.6□□□□□ -1.35
SDCBP-213ENST00000630925 CCDC181Q5TID7 509 aa6.6□□□□□ -1.35
SDCBP-213ENST00000630925 CCDC102AQ96A19 550 aa6.6□□□□□ -1.35
SDCBP-213ENST00000630925 ARHGEF11O15085 1522 aa6.6□□□□□ -1.35
SDCBP-213ENST00000630925 PPFIA4O75335 1185 aa6.59□□□□□ -1.35
SDCBP-213ENST00000630925 OXER1Q8TDS5 423 aa6.59□□□□□ -1.35
SDCBP-213ENST00000630925 UBA5Q9GZZ9 404 aa6.59□□□□□ -1.35
SDCBP-213ENST00000630925 PRR29P0C7W0 189 aa6.59□□□□□ -1.35
SDCBP-213ENST00000630925 SH3D19Q5HYK7 790 aa6.59□□□□□ -1.35
SDCBP-213ENST00000630925 SMC5Q8IY18 1101 aa6.59□□□□□ -1.35
SDCBP-213ENST00000630925 FAM9BQ8IZU0 186 aa6.59□□□□□ -1.35
SDCBP-213ENST00000630925 DCBLD2Q96PD2 775 aa6.59□□□□□ -1.35
SDCBP-213ENST00000630925 SSUH2Q9Y2M2 353 aa6.59□□□□□ -1.35
SDCBP-213ENST00000630925 MINK1Q8N4C8 1332 aaPredicted RBP6.59□□□□□ -1.36
SDCBP-213ENST00000630925 SBNO2Q9Y2G9 1366 aa6.59□□□□□ -1.36
SDCBP-213ENST00000630925 ERCC3P19447 782 aa6.58□□□□□ -1.36
SDCBP-213ENST00000630925 RBM10P98175 930 aaKnown RBP6.58□□□□□ -1.36
SDCBP-213ENST00000630925 GLMNQ92990 594 aa6.58□□□□□ -1.36
SDCBP-213ENST00000630925 VRTNQ9H8Y1 702 aa6.58□□□□□ -1.36
SDCBP-213ENST00000630925 METTL14Q9HCE5 456 aaKnown RBP6.58□□□□□ -1.36
SDCBP-213ENST00000630925 PARNO95453 639 aaKnown RBP6.57□□□□□ -1.36
SDCBP-213ENST00000630925 POTEIP0CG38 1075 aa6.57□□□□□ -1.36
SDCBP-213ENST00000630925 NUBP1P53384 320 aa6.57□□□□□ -1.36
SDCBP-213ENST00000630925 LARGE2Q8N3Y3 721 aa6.57□□□□□ -1.36
SDCBP-213ENST00000630925 MAGEC2Q9UBF1 373 aaPredicted RBP6.57□□□□□ -1.36
SDCBP-213ENST00000630925 SMARCA2P51531 1590 aa6.57□□□□□ -1.36
SDCBP-213ENST00000630925 MS4A1P11836 297 aa6.57□□□□□ -1.36
SDCBP-213ENST00000630925 OS9Q13438 667 aaPredicted RBP6.57□□□□□ -1.36
SDCBP-213ENST00000630925 WWC1Q8IX03 1113 aa6.57□□□□□ -1.36
SDCBP-213ENST00000630925 VTI1AQ96AJ9 217 aa6.57□□□□□ -1.36
SDCBP-213ENST00000630925 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.57□□□□□ -1.36
SDCBP-213ENST00000630925 TMEM88BA6NKF7 163 aa6.56□□□□□ -1.36
SDCBP-213ENST00000630925 CD44P16070 742 aaKnown RBP6.56□□□□□ -1.36
SDCBP-213ENST00000630925 CHADLQ6NUI6 762 aa6.56□□□□□ -1.36
SDCBP-213ENST00000630925 BCL2L13Q9BXK5 485 aa6.56□□□□□ -1.36
SDCBP-213ENST00000630925 TBC1D2Q9BYX2 928 aa6.56□□□□□ -1.36
SDCBP-213ENST00000630925 POM121CA8CG34 1229 aa6.56□□□□□ -1.36
SDCBP-213ENST00000630925 VAMP1P23763 118 aa6.56□□□□□ -1.36
SDCBP-213ENST00000630925 PSME1Q06323 249 aa6.56□□□□□ -1.36
SDCBP-213ENST00000630925 NOP9Q86U38 636 aaKnown RBP6.56□□□□□ -1.36
SDCBP-213ENST00000630925 CCDC194A0A1B0GVG4 234 aa6.55□□□□□ -1.36
SDCBP-213ENST00000630925 MAP2K5Q13163 448 aa6.55□□□□□ -1.36
SDCBP-213ENST00000630925 KCNG1Q9UIX4 513 aa6.55□□□□□ -1.36
SDCBP-213ENST00000630925 RPS6KL1Q9Y6S9 549 aa6.55□□□□□ -1.36
SDCBP-213ENST00000630925 IRF6O14896 467 aa6.54□□□□□ -1.36
SDCBP-213ENST00000630925 CFAP70Q5T0N1 1121 aa6.54□□□□□ -1.36
SDCBP-213ENST00000630925 GIPC2Q8TF65 315 aa6.54□□□□□ -1.36
SDCBP-213ENST00000630925 SECISBP2LQ93073 1101 aaKnown RBP6.54□□□□□ -1.36
SDCBP-213ENST00000630925 SNRKQ9NRH2 765 aa6.54□□□□□ -1.36
SDCBP-213ENST00000630925 CREB3O43889 395 aa6.54□□□□□ -1.36
SDCBP-213ENST00000630925 NEFMP07197 916 aa6.54□□□□□ -1.36
SDCBP-213ENST00000630925 LONRF3Q496Y0 759 aa6.54□□□□□ -1.36
SDCBP-213ENST00000630925 EGFLAMQ63HQ2 1017 aa6.54□□□□□ -1.36
SDCBP-213ENST00000630925 RFX1P22670 979 aa6.53□□□□□ -1.36
SDCBP-213ENST00000630925 FOXD4Q12950 439 aaPredicted RBP6.53□□□□□ -1.36
SDCBP-213ENST00000630925 NPAS4Q8IUM7 802 aa6.53□□□□□ -1.36
SDCBP-213ENST00000630925 PMM1Q92871 262 aa6.53□□□□□ -1.36
SDCBP-213ENST00000630925 NCKAP5LQ9HCH0 1330 aa6.53□□□□□ -1.36
SDCBP-213ENST00000630925 DCAF8Q5TAQ9 597 aa6.53□□□□□ -1.36
SDCBP-213ENST00000630925 KIF21AQ7Z4S6 1674 aa6.52□□□□□ -1.36
SDCBP-213ENST00000630925 CLSPNQ9HAW4 1339 aa6.52□□□□□ -1.37
SDCBP-213ENST00000630925 HMGB1P1B2RPK0 211 aaPredicted RBP6.52□□□□□ -1.37
SDCBP-213ENST00000630925 EIF3JO75822 258 aaKnown RBP6.52□□□□□ -1.37
SDCBP-213ENST00000630925 MTA3Q9BTC8 594 aa6.52□□□□□ -1.37
SDCBP-213ENST00000630925 MAF1Q9H063 256 aa6.52□□□□□ -1.37
SDCBP-213ENST00000630925 FAN1Q9Y2M0 1017 aa6.52□□□□□ -1.37
SDCBP-213ENST00000630925 TMA7Q9Y2S6 64 aaKnown RBP6.52□□□□□ -1.37
SDCBP-213ENST00000630925 TLDC2A0PJX2 215 aa6.51□□□□□ -1.37
SDCBP-213ENST00000630925 RECKO95980 971 aa6.51□□□□□ -1.37
SDCBP-213ENST00000630925 APLP1P51693 650 aa6.51□□□□□ -1.37
SDCBP-213ENST00000630925 CYB5RLQ6IPT4 315 aa6.51□□□□□ -1.37
SDCBP-213ENST00000630925 LNPKQ9C0E8 428 aa6.51□□□□□ -1.37
SDCBP-213ENST00000630925 NCAPD3P42695 1498 aa6.51□□□□□ -1.37
SDCBP-213ENST00000630925 U2SURPO15042 1029 aaKnown RBP6.51□□□□□ -1.37
SDCBP-213ENST00000630925 PPP1R37O75864 691 aa6.51□□□□□ -1.37
SDCBP-213ENST00000630925 PTMAP06454 111 aaKnown RBP6.51□□□□□ -1.37
SDCBP-213ENST00000630925 PTPROQ16827 1216 aa6.51□□□□□ -1.37
SDCBP-213ENST00000630925 CLEC4GQ6UXB4 293 aa6.51□□□□□ -1.37
SDCBP-213ENST00000630925 GIGYF2Q6Y7W6 1299 aaKnown RBP6.51□□□□□ -1.37
SDCBP-213ENST00000630925 MAMSTRQ6ZN01 415 aa6.51□□□□□ -1.37
SDCBP-213ENST00000630925 PROCA1Q8NCQ7 364 aaPredicted RBP6.51□□□□□ -1.37
SDCBP-213ENST00000630925 KCNB2Q92953 911 aa6.51□□□□□ -1.37
SDCBP-213ENST00000630925 GDPD2Q9HCC8 539 aa6.51□□□□□ -1.37
SDCBP-213ENST00000630925 ARAP1Q96P48 1450 aa6.5□□□□□ -1.37
SDCBP-213ENST00000630925 TTLL12Q14166 644 aaPredicted RBP6.5□□□□□ -1.37
SDCBP-213ENST00000630925 SPACA7Q96KW9 195 aa6.5□□□□□ -1.37
SDCBP-213ENST00000630925 MFRPQ9BY79 579 aa6.5□□□□□ -1.37
SDCBP-213ENST00000630925 FARP1Q9Y4F1 1045 aaPredicted RBP6.5□□□□□ -1.37
SDCBP-213ENST00000630925 PAX3P23760 479 aa6.49□□□□□ -1.37
SDCBP-213ENST00000630925 IGBP1P78318 339 aa6.49□□□□□ -1.37
SDCBP-213ENST00000630925 CAMK2BQ13554 666 aa6.49□□□□□ -1.37
SDCBP-213ENST00000630925 MFSD10Q14728 455 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms