RNA–Protein interactions for RNA: ENST00000629385.1

ABCC4-207, Transcript of ATP binding cassette subfamily C member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCC4, Length 2,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4-207ENST00000629385 WDR43Q15061 677 aaKnown RBP eCLIP17.24■□□□□ 0.35
ABCC4-207ENST00000629385 CDCA8Q53HL2 280 aa17.24■□□□□ 0.35
ABCC4-207ENST00000629385 LAMC1P11047 1609 aa17.24■□□□□ 0.35
ABCC4-207ENST00000629385 OSCARQ8IYS5 282 aa17.24■□□□□ 0.35
ABCC4-207ENST00000629385 NUTM2DQ5VT03 806 aaPredicted RBP17.24■□□□□ 0.35
ABCC4-207ENST00000629385 SCAF11Q99590 1463 aaKnown RBP17.23■□□□□ 0.35
ABCC4-207ENST00000629385 AMER1Q5JTC6 1135 aaPredicted RBP17.23■□□□□ 0.35
ABCC4-207ENST00000629385 ARAP3Q8WWN8 1544 aa17.22■□□□□ 0.35
ABCC4-207ENST00000629385 ABCA9Q8IUA7 1624 aa17.21■□□□□ 0.35
ABCC4-207ENST00000629385 PDE3BQ13370 1112 aa17.21■□□□□ 0.35
ABCC4-207ENST00000629385 RNF17Q9BXT8 1623 aaKnown RBP17.21■□□□□ 0.35
ABCC4-207ENST00000629385 CCDC146Q8IYE0 955 aa17.2■□□□□ 0.34
ABCC4-207ENST00000629385 TRAK1Q9UPV9 953 aa17.2■□□□□ 0.34
ABCC4-207ENST00000629385 TET3O43151 1660 aa17.2■□□□□ 0.34
ABCC4-207ENST00000629385 RAPGEF3O95398 923 aa17.2■□□□□ 0.34
ABCC4-207ENST00000629385 INO80Q9ULG1 1556 aaPredicted RBP17.2■□□□□ 0.34
ABCC4-207ENST00000629385 CEP152O94986 1710 aa17.2■□□□□ 0.34
ABCC4-207ENST00000629385 TMEM132EQ6IEE7 984 aa17.19■□□□□ 0.34
ABCC4-207ENST00000629385 EIF3AQ14152 1382 aaKnown RBP17.19■□□□□ 0.34
ABCC4-207ENST00000629385 STAC3Q96MF2 364 aa17.18■□□□□ 0.34
ABCC4-207ENST00000629385 DEPDC5O75140 1603 aa17.18■□□□□ 0.34
ABCC4-207ENST00000629385 CD109Q6YHK3 1445 aa17.17■□□□□ 0.34
ABCC4-207ENST00000629385 ANP32AP39687 249 aaKnown RBP17.17■□□□□ 0.34
ABCC4-207ENST00000629385 TNNT2P45379 298 aaPredicted RBP17.17■□□□□ 0.34
ABCC4-207ENST00000629385 IQGAP1P46940 1657 aa17.16■□□□□ 0.34
ABCC4-207ENST00000629385 NOS1P29475 1434 aa17.15■□□□□ 0.34
ABCC4-207ENST00000629385 ZNF518AQ6AHZ1 1483 aa17.14■□□□□ 0.33
ABCC4-207ENST00000629385 KIDINS220Q9ULH0 1771 aa17.14■□□□□ 0.33
ABCC4-207ENST00000629385 CARD14Q9BXL6 1004 aa17.14■□□□□ 0.33
ABCC4-207ENST00000629385 MROH1Q8NDA8 1641 aa17.13■□□□□ 0.33
ABCC4-207ENST00000629385 BLMP54132 1417 aaPredicted RBP17.13■□□□□ 0.33
ABCC4-207ENST00000629385 VWDEQ8N2E2 1590 aa17.12■□□□□ 0.33
ABCC4-207ENST00000629385 ZBTB47Q9UFB7 747 aaPredicted RBP17.12■□□□□ 0.33
ABCC4-207ENST00000629385 PLEKHH1Q9ULM0 1364 aa17.12■□□□□ 0.33
ABCC4-207ENST00000629385 SKAP1Q86WV1 359 aa17.12■□□□□ 0.33
ABCC4-207ENST00000629385 SAFB2Q14151 953 aaKnown RBP eCLIP17.11■□□□□ 0.33
ABCC4-207ENST00000629385 C20orf194Q5TEA3 1177 aa17.11■□□□□ 0.33
ABCC4-207ENST00000629385 CRBNQ96SW2 442 aa17.11■□□□□ 0.33
ABCC4-207ENST00000629385 ASXL1Q8IXJ9 1541 aa17.11■□□□□ 0.33
ABCC4-207ENST00000629385 APAF1O14727 1248 aa17.1■□□□□ 0.33
ABCC4-207ENST00000629385 CENPJQ9HC77 1338 aaPredicted RBP17.1■□□□□ 0.33
ABCC4-207ENST00000629385 RTL5Q5HYW3 569 aaPredicted RBP17.1■□□□□ 0.33
ABCC4-207ENST00000629385 SLC12A5Q9H2X9 1139 aa17.1■□□□□ 0.33
ABCC4-207ENST00000629385 EFCAB6Q5THR3 1501 aa17.1■□□□□ 0.33
ABCC4-207ENST00000629385 PPRC1Q5VV67 1664 aaKnown RBP17.1■□□□□ 0.33
ABCC4-207ENST00000629385 LAS1LQ9Y4W2 734 aaKnown RBP17.1■□□□□ 0.33
ABCC4-207ENST00000629385 KIF1BO60333 1816 aa17.09■□□□□ 0.33
ABCC4-207ENST00000629385 NPATQ14207 1427 aa17.09■□□□□ 0.33
ABCC4-207ENST00000629385 ABCA6Q8N139 1617 aa17.09■□□□□ 0.33
ABCC4-207ENST00000629385 MAP3K4Q9Y6R4 1608 aa17.09■□□□□ 0.33
ABCC4-207ENST00000629385 ERVK-7P63135 1459 aa17.08■□□□□ 0.33
ABCC4-207ENST00000629385 GOLGA2Q08379 1002 aa17.08■□□□□ 0.33
ABCC4-207ENST00000629385 IPO9Q96P70 1041 aaKnown RBP17.08■□□□□ 0.32
ABCC4-207ENST00000629385 SYNMO15061 1565 aa17.08■□□□□ 0.32
ABCC4-207ENST00000629385 NEUROD2Q15784 382 aa17.07■□□□□ 0.32
ABCC4-207ENST00000629385 DUSP27Q5VZP5 1158 aa17.07■□□□□ 0.32
ABCC4-207ENST00000629385 RTN4Q9NQC3 1192 aaKnown RBP17.07■□□□□ 0.32
ABCC4-207ENST00000629385 MROH2AA6NES4 1674 aa17.06■□□□□ 0.32
ABCC4-207ENST00000629385 POGZQ7Z3K3 1410 aa17.06■□□□□ 0.32
ABCC4-207ENST00000629385 ZMYM4Q5VZL5 1548 aa17.05■□□□□ 0.32
ABCC4-207ENST00000629385 KDM5AP29375 1690 aaKnown RBP17.05■□□□□ 0.32
ABCC4-207ENST00000629385 SPINK5Q9NQ38 1064 aaPredicted RBP17.05■□□□□ 0.32
ABCC4-207ENST00000629385 STK26Q9P289 416 aa17.05■□□□□ 0.32
ABCC4-207ENST00000629385 MYOM2P54296 1465 aa17.04■□□□□ 0.32
ABCC4-207ENST00000629385 MYOM1P52179 1685 aa17.04■□□□□ 0.32
ABCC4-207ENST00000629385 CYB5RLQ6IPT4 315 aa17.03■□□□□ 0.32
ABCC4-207ENST00000629385 MORC1Q86VD1 984 aa17.03■□□□□ 0.32
ABCC4-207ENST00000629385 C14orf93Q9H972 538 aaKnown RBP17.03■□□□□ 0.32
ABCC4-207ENST00000629385 SLC24A1O60721 1099 aa17.03■□□□□ 0.32
ABCC4-207ENST00000629385 PIK3C2GO75747 1445 aa17.01■□□□□ 0.31
ABCC4-207ENST00000629385 RRP7AQ9Y3A4 280 aaKnown RBP17.01■□□□□ 0.31
ABCC4-207ENST00000629385 DMRT2Q9Y5R5 561 aa17.01■□□□□ 0.31
ABCC4-207ENST00000629385 FRMPD1Q5SYB0 1578 aa17■□□□□ 0.31
ABCC4-207ENST00000629385 NSD3Q9BZ95 1437 aa17■□□□□ 0.31
ABCC4-207ENST00000629385 INSRP06213 1382 aa17■□□□□ 0.31
ABCC4-207ENST00000629385 SLFN5Q08AF3 891 aa17■□□□□ 0.31
ABCC4-207ENST00000629385 IDI1Q13907 227 aa17■□□□□ 0.31
ABCC4-207ENST00000629385 KIAA1210Q9ULL0 1709 aa17■□□□□ 0.31
ABCC4-207ENST00000629385 MLH3Q9UHC1 1453 aa16.99■□□□□ 0.31
ABCC4-207ENST00000629385 ZNF521Q96K83 1311 aa16.99■□□□□ 0.31
ABCC4-207ENST00000629385 CABP2Q9NPB3 220 aa16.99■□□□□ 0.31
ABCC4-207ENST00000629385 NPC1L1Q9UHC9 1359 aa16.98■□□□□ 0.31
ABCC4-207ENST00000629385 BCAR3O75815 825 aa16.98■□□□□ 0.31
ABCC4-207ENST00000629385 HECW2Q9P2P5 1572 aa16.98■□□□□ 0.31
ABCC4-207ENST00000629385 ADGRB3O60242 1522 aa16.98■□□□□ 0.31
ABCC4-207ENST00000629385 TCERG1O14776 1098 aaKnown RBP16.97■□□□□ 0.31
ABCC4-207ENST00000629385 VGFO15240 615 aaPredicted RBP16.97■□□□□ 0.31
ABCC4-207ENST00000629385 PDE4AP27815 886 aa16.97■□□□□ 0.31
ABCC4-207ENST00000629385 LMTK2Q8IWU2 1503 aa16.96■□□□□ 0.31
ABCC4-207ENST00000629385 IFT172Q9UG01 1749 aa16.95■□□□□ 0.3
ABCC4-207ENST00000629385 NRXN1Q9ULB1 1477 aa16.95■□□□□ 0.3
ABCC4-207ENST00000629385 NEFMP07197 916 aa16.95■□□□□ 0.3
ABCC4-207ENST00000629385 MTHFSP49914 203 aa16.95■□□□□ 0.3
ABCC4-207ENST00000629385 IL27Q8NEV9 243 aa16.95■□□□□ 0.3
ABCC4-207ENST00000629385 ABCC3O15438 1527 aa16.95■□□□□ 0.3
ABCC4-207ENST00000629385 FBXO31Q5XUX0 539 aaPredicted RBP16.94■□□□□ 0.3
ABCC4-207ENST00000629385 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.94■□□□□ 0.3
ABCC4-207ENST00000629385 YEATS2Q9ULM3 1422 aa16.94■□□□□ 0.3
ABCC4-207ENST00000629385 SRPK2P78362 688 aaKnown RBP16.93■□□□□ 0.3
ABCC4-207ENST00000629385 NEURL4Q96JN8 1562 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms