RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 ABCC3O15438 1527 aa16.99■□□□□ 0.31
SYNGAP1-207ENST00000628646 SLC24A1O60721 1099 aa16.98■□□□□ 0.31
SYNGAP1-207ENST00000628646 RIMS2Q9UQ26 1411 aa16.97■□□□□ 0.31
SYNGAP1-207ENST00000628646 RBM33Q96EV2 1170 aaKnown RBP16.97■□□□□ 0.31
SYNGAP1-207ENST00000628646 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
SYNGAP1-207ENST00000628646 ZBTB7CA1YPR0 619 aa16.96■□□□□ 0.31
SYNGAP1-207ENST00000628646 HAP1P54257 671 aaPredicted RBP16.96■□□□□ 0.3
SYNGAP1-207ENST00000628646 BCORL1Q5H9F3 1711 aa16.95■□□□□ 0.3
SYNGAP1-207ENST00000628646 PRAM1Q96QH2 718 aa16.95■□□□□ 0.3
SYNGAP1-207ENST00000628646 AGLP35573 1532 aa16.95■□□□□ 0.3
SYNGAP1-207ENST00000628646 PPRC1Q5VV67 1664 aaKnown RBP16.94■□□□□ 0.3
SYNGAP1-207ENST00000628646 USP47Q96K76 1375 aa16.94■□□□□ 0.3
SYNGAP1-207ENST00000628646 CENPJQ9HC77 1338 aaPredicted RBP16.94■□□□□ 0.3
SYNGAP1-207ENST00000628646 ERVK-7P63135 1459 aa16.93■□□□□ 0.3
SYNGAP1-207ENST00000628646 FRMPD1Q5SYB0 1578 aa16.93■□□□□ 0.3
SYNGAP1-207ENST00000628646 NEFLP07196 543 aa16.93■□□□□ 0.3
SYNGAP1-207ENST00000628646 ATF3P18847 181 aa16.92■□□□□ 0.3
SYNGAP1-207ENST00000628646 AMOTL2Q9Y2J4 779 aa16.92■□□□□ 0.3
SYNGAP1-207ENST00000628646 CCDC7Q96M83 1385 aa16.92■□□□□ 0.3
SYNGAP1-207ENST00000628646 KDM4FA0A1W2PPD8 638 aa16.92■□□□□ 0.3
SYNGAP1-207ENST00000628646 PRDM15P57071 1507 aaPredicted RBP16.91■□□□□ 0.3
SYNGAP1-207ENST00000628646 PAK3O75914 559 aaPredicted RBP16.91■□□□□ 0.3
SYNGAP1-207ENST00000628646 NGDNQ8NEJ9 315 aaKnown RBP16.91■□□□□ 0.3
SYNGAP1-207ENST00000628646 UGGT1Q9NYU2 1555 aa16.91■□□□□ 0.3
SYNGAP1-207ENST00000628646 LTKP29376 864 aa16.9■□□□□ 0.3
SYNGAP1-207ENST00000628646 KNSTRNQ9Y448 316 aa16.9■□□□□ 0.3
SYNGAP1-207ENST00000628646 EIF2AK4Q9P2K8 1649 aaKnown RBP16.9■□□□□ 0.3
SYNGAP1-207ENST00000628646 WAPLQ7Z5K2 1190 aa16.89■□□□□ 0.29
SYNGAP1-207ENST00000628646 CLTCQ00610 1675 aaKnown RBP16.89■□□□□ 0.29
SYNGAP1-207ENST00000628646 EVC2Q86UK5 1308 aa16.88■□□□□ 0.29
SYNGAP1-207ENST00000628646 TMEM2Q9UHN6 1383 aa16.88■□□□□ 0.29
SYNGAP1-207ENST00000628646 EFCAB6Q5THR3 1501 aa16.88■□□□□ 0.29
SYNGAP1-207ENST00000628646 SOX12O15370 315 aa16.88■□□□□ 0.29
SYNGAP1-207ENST00000628646 ARHGAP31Q2M1Z3 1444 aa16.88■□□□□ 0.29
SYNGAP1-207ENST00000628646 CEP152O94986 1710 aa16.88■□□□□ 0.29
SYNGAP1-207ENST00000628646 UNC13BO14795 1591 aa16.87■□□□□ 0.29
SYNGAP1-207ENST00000628646 PTPRMP28827 1452 aa16.87■□□□□ 0.29
SYNGAP1-207ENST00000628646 C14orf93Q9H972 538 aaKnown RBP16.87■□□□□ 0.29
SYNGAP1-207ENST00000628646 TET3O43151 1660 aa16.87■□□□□ 0.29
SYNGAP1-207ENST00000628646 HDGFL2Q7Z4V5 671 aaPredicted RBP16.86■□□□□ 0.29
SYNGAP1-207ENST00000628646 IQGAP3Q86VI3 1631 aa16.85■□□□□ 0.29
SYNGAP1-207ENST00000628646 RIMS1Q86UR5 1692 aaKnown RBP16.85■□□□□ 0.29
SYNGAP1-207ENST00000628646 CABP2Q9NPB3 220 aa16.84■□□□□ 0.29
SYNGAP1-207ENST00000628646 TNNT2P45379 298 aaPredicted RBP16.84■□□□□ 0.29
SYNGAP1-207ENST00000628646 KIF7Q2M1P5 1343 aa16.84■□□□□ 0.29
SYNGAP1-207ENST00000628646 NLRP1Q9C000 1473 aa16.83■□□□□ 0.29
SYNGAP1-207ENST00000628646 PPM1GO15355 546 aaPredicted RBP16.83■□□□□ 0.28
SYNGAP1-207ENST00000628646 CCDC184Q52MB2 194 aa16.83■□□□□ 0.28
SYNGAP1-207ENST00000628646 RALGAPBQ86X10 1494 aa16.83■□□□□ 0.28
SYNGAP1-207ENST00000628646 PLA2R1Q13018 1463 aa16.82■□□□□ 0.28
SYNGAP1-207ENST00000628646 PTPRTO14522 1441 aa16.82■□□□□ 0.28
SYNGAP1-207ENST00000628646 MADDQ8WXG6 1647 aa16.81■□□□□ 0.28
SYNGAP1-207ENST00000628646 TERF2IPQ9NYB0 399 aa16.81■□□□□ 0.28
SYNGAP1-207ENST00000628646 CC2D1BQ5T0F9 858 aaKnown RBP16.8■□□□□ 0.28
SYNGAP1-207ENST00000628646 TBX22Q9Y458 520 aa16.8■□□□□ 0.28
SYNGAP1-207ENST00000628646 PIP4K2BP78356 416 aa16.8■□□□□ 0.28
SYNGAP1-207ENST00000628646 ESCO1Q5FWF5 840 aa16.8■□□□□ 0.28
SYNGAP1-207ENST00000628646 KCNA6P17658 529 aa16.79■□□□□ 0.28
SYNGAP1-207ENST00000628646 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.79■□□□□ 0.28
SYNGAP1-207ENST00000628646 TRPM2O94759 1503 aa16.79■□□□□ 0.28
SYNGAP1-207ENST00000628646 CAMSAP1Q5T5Y3 1602 aa16.79■□□□□ 0.28
SYNGAP1-207ENST00000628646 PMFBP1Q8TBY8 1022 aa16.78■□□□□ 0.28
SYNGAP1-207ENST00000628646 PRKRIP1Q9H875 184 aaPredicted RBP16.78■□□□□ 0.28
SYNGAP1-207ENST00000628646 E9PCH4 1651 aa16.78■□□□□ 0.28
SYNGAP1-207ENST00000628646 PSME1Q06323 249 aa16.78■□□□□ 0.28
SYNGAP1-207ENST00000628646 CDK19Q9BWU1 502 aa16.78■□□□□ 0.28
SYNGAP1-207ENST00000628646 LMTK2Q8IWU2 1503 aa16.77■□□□□ 0.28
SYNGAP1-207ENST00000628646 FER1L4A9Z1Z3 1794 aa16.77■□□□□ 0.28
SYNGAP1-207ENST00000628646 TRPM1Q7Z4N2 1603 aa16.77■□□□□ 0.27
SYNGAP1-207ENST00000628646 RNF17Q9BXT8 1623 aaKnown RBP16.76■□□□□ 0.27
SYNGAP1-207ENST00000628646 A2ML1A8K2U0 1454 aa16.75■□□□□ 0.27
SYNGAP1-207ENST00000628646 PRAG1Q86YV5 1406 aa16.75■□□□□ 0.27
SYNGAP1-207ENST00000628646 REREQ9P2R6 1566 aa16.75■□□□□ 0.27
SYNGAP1-207ENST00000628646 SETD1BQ9UPS6 1966 aaKnown RBP16.74■□□□□ 0.27
SYNGAP1-207ENST00000628646 SCAF11Q99590 1463 aaKnown RBP16.74■□□□□ 0.27
SYNGAP1-207ENST00000628646 NEFMP07197 916 aa16.73■□□□□ 0.27
SYNGAP1-207ENST00000628646 PANK3Q9H999 370 aa16.73■□□□□ 0.27
SYNGAP1-207ENST00000628646 NPHP4O75161 1426 aaPredicted RBP16.72■□□□□ 0.27
SYNGAP1-207ENST00000628646 MORC1Q86VD1 984 aa16.72■□□□□ 0.27
SYNGAP1-207ENST00000628646 KIF1BO60333 1816 aa16.71■□□□□ 0.27
SYNGAP1-207ENST00000628646 SPHKAPQ2M3C7 1700 aa16.71■□□□□ 0.26
SYNGAP1-207ENST00000628646 ZC3H13Q5T200 1668 aaKnown RBP16.7■□□□□ 0.26
SYNGAP1-207ENST00000628646 CLTCL1P53675 1640 aa16.7■□□□□ 0.26
SYNGAP1-207ENST00000628646 CABP1Q9NZU7 370 aa16.7■□□□□ 0.26
SYNGAP1-207ENST00000628646 XPCQ01831 940 aaPredicted RBP16.7■□□□□ 0.26
SYNGAP1-207ENST00000628646 FKBP8Q14318 412 aa16.7■□□□□ 0.26
SYNGAP1-207ENST00000628646 SLC12A5Q9H2X9 1139 aa16.7■□□□□ 0.26
SYNGAP1-207ENST00000628646 LAMC1P11047 1609 aa16.69■□□□□ 0.26
SYNGAP1-207ENST00000628646 PLEKHG1Q9ULL1 1385 aa16.69■□□□□ 0.26
SYNGAP1-207ENST00000628646 NUDT16Q96DE0 195 aaKnown RBP16.69■□□□□ 0.26
SYNGAP1-207ENST00000628646 TSHZ2Q9NRE2 1034 aa16.69■□□□□ 0.26
SYNGAP1-207ENST00000628646 UBAP1LF5GYI3 381 aa16.68■□□□□ 0.26
SYNGAP1-207ENST00000628646 NUTM2GQ5VZR2 741 aa16.68■□□□□ 0.26
SYNGAP1-207ENST00000628646 CADPS2Q86UW7 1296 aa16.68■□□□□ 0.26
SYNGAP1-207ENST00000628646 MSH6P52701 1360 aa16.68■□□□□ 0.26
SYNGAP1-207ENST00000628646 MROH1Q8NDA8 1641 aa16.68■□□□□ 0.26
SYNGAP1-207ENST00000628646 YTHDC2Q9H6S0 1430 aaKnown RBP16.67■□□□□ 0.26
SYNGAP1-207ENST00000628646 WASLO00401 505 aaPredicted RBP16.67■□□□□ 0.26
SYNGAP1-207ENST00000628646 ZNF335Q9H4Z2 1342 aaPredicted RBP16.67■□□□□ 0.26
SYNGAP1-207ENST00000628646 MRS2Q9HD23 443 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms