RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 GGT6Q6P531 493 aa14.68□□□□□ -0.06
ATRX-216ENST00000624403 TRPM2O94759 1503 aa14.67□□□□□ -0.06
ATRX-216ENST00000624403 EFCAB6Q5THR3 1501 aa14.67□□□□□ -0.06
ATRX-216ENST00000624403 CEP152O94986 1710 aa14.66□□□□□ -0.06
ATRX-216ENST00000624403 UHRF1BP1Q6BDS2 1440 aa14.66□□□□□ -0.06
ATRX-216ENST00000624403 CD44P16070 742 aaKnown RBP14.65□□□□□ -0.06
ATRX-216ENST00000624403 SPHKAPQ2M3C7 1700 aa14.65□□□□□ -0.06
ATRX-216ENST00000624403 ABCC3O15438 1527 aa14.65□□□□□ -0.06
ATRX-216ENST00000624403 MNX1P50219 401 aaPredicted RBP14.64□□□□□ -0.07
ATRX-216ENST00000624403 DNAJC5Q9H3Z4 198 aa14.64□□□□□ -0.07
ATRX-216ENST00000624403 DCAF11Q8TEB1 546 aa14.63□□□□□ -0.07
ATRX-216ENST00000624403 HIRIP3Q9BW71 556 aaPredicted RBP14.63□□□□□ -0.07
ATRX-216ENST00000624403 REREQ9P2R6 1566 aa14.63□□□□□ -0.07
ATRX-216ENST00000624403 WASHC2CQ9Y4E1 1318 aa14.63□□□□□ -0.07
ATRX-216ENST00000624403 CLTCL1P53675 1640 aa14.63□□□□□ -0.07
ATRX-216ENST00000624403 ZNF326Q5BKZ1 582 aaKnown RBP14.62□□□□□ -0.07
ATRX-216ENST00000624403 KDM2AQ9Y2K7 1162 aa14.62□□□□□ -0.07
ATRX-216ENST00000624403 SPATA31E1Q6ZUB1 1445 aa14.61□□□□□ -0.07
ATRX-216ENST00000624403 HSPA5P11021 654 aaKnown RBP14.61□□□□□ -0.07
ATRX-216ENST00000624403 RGL3Q3MIN7 710 aa14.61□□□□□ -0.07
ATRX-216ENST00000624403 AGLP35573 1532 aa14.61□□□□□ -0.07
ATRX-216ENST00000624403 ARHGEF40Q8TER5 1519 aa14.61□□□□□ -0.07
ATRX-216ENST00000624403 NPATQ14207 1427 aa14.6□□□□□ -0.07
ATRX-216ENST00000624403 EIF4G2P78344 907 aaKnown RBP eCLIP14.6□□□□□ -0.07
ATRX-216ENST00000624403 CAMSAP1Q5T5Y3 1602 aa14.59□□□□□ -0.07
ATRX-216ENST00000624403 RALGAPBQ86X10 1494 aa14.59□□□□□ -0.07
ATRX-216ENST00000624403 ZC3H13Q5T200 1668 aaKnown RBP14.58□□□□□ -0.08
ATRX-216ENST00000624403 PRAG1Q86YV5 1406 aa14.58□□□□□ -0.08
ATRX-216ENST00000624403 UGGT1Q9NYU2 1555 aa14.57□□□□□ -0.08
ATRX-216ENST00000624403 MIER1Q8N108 512 aa14.57□□□□□ -0.08
ATRX-216ENST00000624403 ARHGAP31Q2M1Z3 1444 aa14.57□□□□□ -0.08
ATRX-216ENST00000624403 CNTLNQ9NXG0 1405 aa14.56□□□□□ -0.08
ATRX-216ENST00000624403 SIGLEC1Q9BZZ2 1709 aa14.55□□□□□ -0.08
ATRX-216ENST00000624403 NEURL4Q96JN8 1562 aa14.55□□□□□ -0.08
ATRX-216ENST00000624403 NOS1P29475 1434 aa14.54□□□□□ -0.08
ATRX-216ENST00000624403 USP47Q96K76 1375 aa14.52□□□□□ -0.08
ATRX-216ENST00000624403 TRPM1Q7Z4N2 1603 aa14.52□□□□□ -0.09
ATRX-216ENST00000624403 DDX10Q13206 875 aaKnown RBP14.51□□□□□ -0.09
ATRX-216ENST00000624403 CARD11Q9BXL7 1154 aa14.51□□□□□ -0.09
ATRX-216ENST00000624403 SYNMO15061 1565 aa14.51□□□□□ -0.09
ATRX-216ENST00000624403 ROCK2O75116 1388 aaKnown RBP14.5□□□□□ -0.09
ATRX-216ENST00000624403 GABBR2O75899 941 aa14.5□□□□□ -0.09
ATRX-216ENST00000624403 STAC3Q96MF2 364 aa14.5□□□□□ -0.09
ATRX-216ENST00000624403 ZRANB1Q9UGI0 708 aa14.5□□□□□ -0.09
ATRX-216ENST00000624403 ADGRB3O60242 1522 aa14.5□□□□□ -0.09
ATRX-216ENST00000624403 MADDQ8WXG6 1647 aa14.49□□□□□ -0.09
ATRX-216ENST00000624403 MLECQ14165 292 aa14.49□□□□□ -0.09
ATRX-216ENST00000624403 KIF1BO60333 1816 aa14.49□□□□□ -0.09
ATRX-216ENST00000624403 MROH2AA6NES4 1674 aa14.49□□□□□ -0.09
ATRX-216ENST00000624403 GPRASP1Q5JY77 1395 aa14.48□□□□□ -0.09
ATRX-216ENST00000624403 WASHC2AQ641Q2 1341 aa14.48□□□□□ -0.09
ATRX-216ENST00000624403 NBPF1Q3BBV0 1214 aa14.48□□□□□ -0.09
ATRX-216ENST00000624403 PIK3C2BO00750 1634 aa14.48□□□□□ -0.09
ATRX-216ENST00000624403 C11orf95C9JLR9 678 aaPredicted RBP14.47□□□□□ -0.09
ATRX-216ENST00000624403 CHGAP10645 457 aaKnown RBP14.47□□□□□ -0.09
ATRX-216ENST00000624403 PLCD3Q8N3E9 789 aa14.47□□□□□ -0.09
ATRX-216ENST00000624403 CLTCQ00610 1675 aaKnown RBP14.46□□□□□ -0.09
ATRX-216ENST00000624403 PREX1Q8TCU6 1659 aa14.46□□□□□ -0.09
ATRX-216ENST00000624403 MYOM2P54296 1465 aa14.46□□□□□ -0.09
ATRX-216ENST00000624403 LAMC1P11047 1609 aa14.46□□□□□ -0.09
ATRX-216ENST00000624403 CFAP65Q6ZU64 1925 aaKnown RBP14.46□□□□□ -0.09
ATRX-216ENST00000624403 CCDC7Q96M83 1385 aa14.46□□□□□ -0.1
ATRX-216ENST00000624403 ERVK-7P63135 1459 aa14.45□□□□□ -0.1
ATRX-216ENST00000624403 PLEKHG5O94827 1062 aa14.45□□□□□ -0.1
ATRX-216ENST00000624403 FBXO31Q5XUX0 539 aaPredicted RBP14.45□□□□□ -0.1
ATRX-216ENST00000624403 ARID4BQ4LE39 1312 aaPredicted RBP14.44□□□□□ -0.1
ATRX-216ENST00000624403 IFT172Q9UG01 1749 aa14.44□□□□□ -0.1
ATRX-216ENST00000624403 IDI1Q13907 227 aa14.43□□□□□ -0.1
ATRX-216ENST00000624403 SLC52A1Q9NWF4 448 aa14.43□□□□□ -0.1
ATRX-216ENST00000624403 KIF7Q2M1P5 1343 aa14.42□□□□□ -0.1
ATRX-216ENST00000624403 RPGRIP1LQ68CZ1 1315 aa14.42□□□□□ -0.1
ATRX-216ENST00000624403 ADGRF5Q8IZF2 1346 aa14.42□□□□□ -0.1
ATRX-216ENST00000624403 NRXN1Q9ULB1 1477 aa14.42□□□□□ -0.1
ATRX-216ENST00000624403 ST20-MTHFSA0A0A6YYL1 179 aa14.41□□□□□ -0.1
ATRX-216ENST00000624403 ZNF579Q8NAF0 562 aaKnown RBP14.41□□□□□ -0.1
ATRX-216ENST00000624403 FBXO3Q9UK99 471 aa14.41□□□□□ -0.1
ATRX-216ENST00000624403 SPATA31D1Q6ZQQ2 1576 aa14.4□□□□□ -0.1
ATRX-216ENST00000624403 PAK3O75914 559 aaPredicted RBP14.4□□□□□ -0.1
ATRX-216ENST00000624403 ESF1Q9H501 851 aaKnown RBP14.4□□□□□ -0.1
ATRX-216ENST00000624403 PPLO60437 1756 aa14.39□□□□□ -0.11
ATRX-216ENST00000624403 ZMYM3Q14202 1370 aa14.39□□□□□ -0.11
ATRX-216ENST00000624403 KIAA1210Q9ULL0 1709 aa14.39□□□□□ -0.11
ATRX-216ENST00000624403 POLR1AO95602 1720 aaPredicted RBP14.38□□□□□ -0.11
ATRX-216ENST00000624403 TMEM131LA2VDJ0 1609 aa14.37□□□□□ -0.11
ATRX-216ENST00000624403 NEXMIFQ5QGS0 1516 aa14.37□□□□□ -0.11
ATRX-216ENST00000624403 CFAP70Q5T0N1 1121 aa14.37□□□□□ -0.11
ATRX-216ENST00000624403 PIK3C2GO75747 1445 aa14.36□□□□□ -0.11
ATRX-216ENST00000624403 SCAF11Q99590 1463 aaKnown RBP14.36□□□□□ -0.11
ATRX-216ENST00000624403 IQGAP1P46940 1657 aa14.36□□□□□ -0.11
ATRX-216ENST00000624403 PHF12Q96QT6 1004 aa14.35□□□□□ -0.11
ATRX-216ENST00000624403 TSPYL2Q9H2G4 693 aaPredicted RBP14.35□□□□□ -0.11
ATRX-216ENST00000624403 TESK2Q96S53 571 aa14.34□□□□□ -0.11
ATRX-216ENST00000624403 ZFYVE9O95405 1425 aa14.33□□□□□ -0.11
ATRX-216ENST00000624403 VGFO15240 615 aaPredicted RBP14.33□□□□□ -0.12
ATRX-216ENST00000624403 ANP32CO43423 234 aa14.33□□□□□ -0.12
ATRX-216ENST00000624403 NUTM2DQ5VT03 806 aaPredicted RBP14.33□□□□□ -0.12
ATRX-216ENST00000624403 POLR3GLQ9BT43 218 aa14.33□□□□□ -0.12
ATRX-216ENST00000624403 C14orf93Q9H972 538 aaKnown RBP14.33□□□□□ -0.12
ATRX-216ENST00000624403 TNRQ92752 1358 aa14.32□□□□□ -0.12
ATRX-216ENST00000624403 MYO5BQ9ULV0 1848 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms