RNA–Protein interactions for RNA: ENST00000622089.4

ITSN2-213, Transcript of intersectin 2, humanhuman

TSL 5 BASIC

Gene ITSN2, Length 5,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-213ENST00000622089 MCTP1Q6DN14 999 aa11.33□□□□□ -0.6
ITSN2-213ENST00000622089 COG3Q96JB2 828 aa11.33□□□□□ -0.6
ITSN2-213ENST00000622089 PCMTD1Q96MG8 357 aaPredicted RBP11.33□□□□□ -0.6
ITSN2-213ENST00000622089 CALRP27797 417 aaKnown RBP11.33□□□□□ -0.6
ITSN2-213ENST00000622089 ZNF592Q92610 1267 aa11.33□□□□□ -0.6
ITSN2-213ENST00000622089 PANK3Q9H999 370 aa11.33□□□□□ -0.6
ITSN2-213ENST00000622089 INTS3Q68E01 1043 aaKnown RBP11.33□□□□□ -0.6
ITSN2-213ENST00000622089 ABCC8Q09428 1581 aa11.33□□□□□ -0.6
ITSN2-213ENST00000622089 VSIG10Q8N0Z9 540 aa11.32□□□□□ -0.6
ITSN2-213ENST00000622089 SASS6Q6UVJ0 657 aa11.32□□□□□ -0.6
ITSN2-213ENST00000622089 HOMER1Q86YM7 354 aa11.32□□□□□ -0.6
ITSN2-213ENST00000622089 CCDC39Q9UFE4 941 aa11.32□□□□□ -0.6
ITSN2-213ENST00000622089 GTF2E1P29083 439 aaPredicted RBP11.32□□□□□ -0.6
ITSN2-213ENST00000622089 HSP90AB4PQ58FF6 505 aa11.32□□□□□ -0.6
ITSN2-213ENST00000622089 EXOC6Q8TAG9 804 aa11.32□□□□□ -0.6
ITSN2-213ENST00000622089 MAP7D2Q96T17 732 aa11.32□□□□□ -0.6
ITSN2-213ENST00000622089 RUFY1Q96T51 708 aa11.32□□□□□ -0.6
ITSN2-213ENST00000622089 WASHC2CQ9Y4E1 1318 aa11.31□□□□□ -0.6
ITSN2-213ENST00000622089 LETM1O95202 739 aaPredicted RBP11.31□□□□□ -0.6
ITSN2-213ENST00000622089 TCEAL9Q9UHQ7 104 aa11.31□□□□□ -0.6
ITSN2-213ENST00000622089 CPLX1O14810 134 aa11.31□□□□□ -0.6
ITSN2-213ENST00000622089 IFIT2P09913 472 aaKnown RBP11.31□□□□□ -0.6
ITSN2-213ENST00000622089 BICD2Q8TD16 824 aa11.31□□□□□ -0.6
ITSN2-213ENST00000622089 PRKRIP1Q9H875 184 aaPredicted RBP11.31□□□□□ -0.6
ITSN2-213ENST00000622089 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.31□□□□□ -0.6
ITSN2-213ENST00000622089 RRP12Q5JTH9 1297 aaKnown RBP11.3□□□□□ -0.6
ITSN2-213ENST00000622089 CECR2Q9BXF3 1484 aa11.3□□□□□ -0.6
ITSN2-213ENST00000622089 FAM43AQ8N2R8 423 aa11.3□□□□□ -0.6
ITSN2-213ENST00000622089 NAT10Q9H0A0 1025 aaKnown RBP11.3□□□□□ -0.6
ITSN2-213ENST00000622089 CCDC9Q9Y3X0 531 aaKnown RBP11.3□□□□□ -0.6
ITSN2-213ENST00000622089 TOP2AP11388 1531 aaKnown RBP11.3□□□□□ -0.6
ITSN2-213ENST00000622089 DDX58O95786 925 aaKnown RBP11.3□□□□□ -0.6
ITSN2-213ENST00000622089 TRDNQ13061 729 aa11.3□□□□□ -0.6
ITSN2-213ENST00000622089 DZIP1LQ8IYY4 767 aaKnown RBP11.3□□□□□ -0.6
ITSN2-213ENST00000622089 ERCC4Q92889 916 aaPredicted RBP11.3□□□□□ -0.6
ITSN2-213ENST00000622089 DHX57Q6P158 1386 aaKnown RBP11.3□□□□□ -0.6
ITSN2-213ENST00000622089 TRHP20396 242 aaPredicted RBP11.29□□□□□ -0.6
ITSN2-213ENST00000622089 MNS1Q8NEH6 495 aa11.29□□□□□ -0.6
ITSN2-213ENST00000622089 USP47Q96K76 1375 aa11.29□□□□□ -0.6
ITSN2-213ENST00000622089 WWC1Q8IX03 1113 aa11.29□□□□□ -0.6
ITSN2-213ENST00000622089 SMC3Q9UQE7 1217 aa11.29□□□□□ -0.6
ITSN2-213ENST00000622089 RRP7AQ9Y3A4 280 aaKnown RBP11.29□□□□□ -0.6
ITSN2-213ENST00000622089 CCDC73Q6ZRK6 1079 aa11.29□□□□□ -0.6
ITSN2-213ENST00000622089 TRIM34Q9BYJ4 488 aa11.29□□□□□ -0.6
ITSN2-213ENST00000622089 ERC2O15083 957 aa11.29□□□□□ -0.6
ITSN2-213ENST00000622089 HNRNPMP52272 730 aaKnown RBP eCLIP11.29□□□□□ -0.6
ITSN2-213ENST00000622089 CWC15Q9P013 229 aaKnown RBP11.29□□□□□ -0.6
ITSN2-213ENST00000622089 ERICH2A1L162 156 aa11.28□□□□□ -0.6
ITSN2-213ENST00000622089 VGFO15240 615 aaPredicted RBP11.28□□□□□ -0.6
ITSN2-213ENST00000622089 CCP110O43303 1012 aa11.28□□□□□ -0.6
ITSN2-213ENST00000622089 C9orf78Q9NZ63 289 aaPredicted RBP11.28□□□□□ -0.6
ITSN2-213ENST00000622089 HSP90B2PQ58FF3 399 aa11.28□□□□□ -0.6
ITSN2-213ENST00000622089 TTC5Q8N0Z6 440 aa11.28□□□□□ -0.6
ITSN2-213ENST00000622089 COG6Q9Y2V7 657 aa11.28□□□□□ -0.6
ITSN2-213ENST00000622089 ST20-MTHFSA0A0A6YYL1 179 aa11.27□□□□□ -0.6
ITSN2-213ENST00000622089 MRE11P49959 708 aa11.27□□□□□ -0.6
ITSN2-213ENST00000622089 TEFQ10587 303 aa11.27□□□□□ -0.6
ITSN2-213ENST00000622089 SAFBQ15424 915 aaKnown RBP eCLIP11.27□□□□□ -0.6
ITSN2-213ENST00000622089 NINLQ9Y2I6 1382 aa11.27□□□□□ -0.6
ITSN2-213ENST00000622089 DHX8Q14562 1220 aaKnown RBP11.27□□□□□ -0.6
ITSN2-213ENST00000622089 CTDP1Q9Y5B0 961 aaPredicted RBP11.27□□□□□ -0.61
ITSN2-213ENST00000622089 DCTN1Q14203 1278 aa11.27□□□□□ -0.61
ITSN2-213ENST00000622089 FHOD3Q2V2M9 1422 aa11.27□□□□□ -0.61
ITSN2-213ENST00000622089 OLFM4Q6UX06 510 aa11.26□□□□□ -0.61
ITSN2-213ENST00000622089 MYO6Q9UM54 1294 aa11.26□□□□□ -0.61
ITSN2-213ENST00000622089 TRAK1Q9UPV9 953 aa11.26□□□□□ -0.61
ITSN2-213ENST00000622089 DIAPH1O60610 1272 aaKnown RBP11.26□□□□□ -0.61
ITSN2-213ENST00000622089 SLC4A3P48751 1232 aa11.26□□□□□ -0.61
ITSN2-213ENST00000622089 G3BP1Q13283 466 aaKnown RBP eCLIP11.26□□□□□ -0.61
ITSN2-213ENST00000622089 LTV1Q96GA3 475 aaPredicted RBP11.26□□□□□ -0.61
ITSN2-213ENST00000622089 STAC3Q96MF2 364 aa11.26□□□□□ -0.61
ITSN2-213ENST00000622089 FAM13BQ9NYF5 915 aa11.26□□□□□ -0.61
ITSN2-213ENST00000622089 RUNDC1Q96C34 613 aa11.26□□□□□ -0.61
ITSN2-213ENST00000622089 KIF7Q2M1P5 1343 aa11.26□□□□□ -0.61
ITSN2-213ENST00000622089 IFT57Q9NWB7 429 aa11.25□□□□□ -0.61
ITSN2-213ENST00000622089 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.25□□□□□ -0.61
ITSN2-213ENST00000622089 PLIN1O60240 522 aa11.25□□□□□ -0.61
ITSN2-213ENST00000622089 NFXL1Q6ZNB6 911 aa11.25□□□□□ -0.61
ITSN2-213ENST00000622089 PATL2C9JE40 543 aaKnown RBP11.25□□□□□ -0.61
ITSN2-213ENST00000622089 CDC45O75419 566 aa11.25□□□□□ -0.61
ITSN2-213ENST00000622089 CCDC173Q0VFZ6 552 aa11.25□□□□□ -0.61
ITSN2-213ENST00000622089 BRMS1Q9HCU9 246 aa11.25□□□□□ -0.61
ITSN2-213ENST00000622089 GNAI1P63096 354 aa11.24□□□□□ -0.61
ITSN2-213ENST00000622089 PSMA5P28066 241 aa11.24□□□□□ -0.61
ITSN2-213ENST00000622089 RDXP35241 583 aaKnown RBP11.24□□□□□ -0.61
ITSN2-213ENST00000622089 C22orf23Q9BZE7 217 aa11.24□□□□□ -0.61
ITSN2-213ENST00000622089 FOXD4L6Q3SYB3 417 aaPredicted RBP11.24□□□□□ -0.61
ITSN2-213ENST00000622089 FOXD4L3Q6VB84 417 aaPredicted RBP11.24□□□□□ -0.61
ITSN2-213ENST00000622089 BCL2L13Q9BXK5 485 aa11.24□□□□□ -0.61
ITSN2-213ENST00000622089 MROH2BQ7Z745 1585 aa11.23□□□□□ -0.61
ITSN2-213ENST00000622089 VPS37CA5D8V6 355 aaPredicted RBP11.23□□□□□ -0.61
ITSN2-213ENST00000622089 CCDC66A2RUB6 948 aa11.23□□□□□ -0.61
ITSN2-213ENST00000622089 MIA2Q96PC5 1412 aa11.23□□□□□ -0.61
ITSN2-213ENST00000622089 APPP05067 770 aa11.23□□□□□ -0.61
ITSN2-213ENST00000622089 MBD3O95983 291 aa11.22□□□□□ -0.61
ITSN2-213ENST00000622089 XBP1P17861 261 aa11.22□□□□□ -0.61
ITSN2-213ENST00000622089 CUX1P39880 1505 aa11.22□□□□□ -0.61
ITSN2-213ENST00000622089 APAF1O14727 1248 aa11.22□□□□□ -0.61
ITSN2-213ENST00000622089 NASPP49321 788 aaPredicted RBP11.22□□□□□ -0.61
ITSN2-213ENST00000622089 MCM2P49736 904 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms