RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 SPHKAPQ2M3C7 1700 aa27.06■■□□□ 1.92
SCAMP4-213ENST00000621748 HDGFP51858 240 aaKnown RBP27.05■■□□□ 1.92
SCAMP4-213ENST00000621748 BCANQ96GW7 911 aa27.05■■□□□ 1.92
SCAMP4-213ENST00000621748 TRIM52Q96A61 297 aa27.04■■□□□ 1.92
SCAMP4-213ENST00000621748 PPP1R15AO75807 674 aaPredicted RBP27.03■■□□□ 1.92
SCAMP4-213ENST00000621748 PIP4K2BP78356 416 aa27.03■■□□□ 1.92
SCAMP4-213ENST00000621748 PLEKHG1Q9ULL1 1385 aa27.03■■□□□ 1.92
SCAMP4-213ENST00000621748 NUTM2DQ5VT03 806 aaPredicted RBP27.02■■□□□ 1.92
SCAMP4-213ENST00000621748 ALKQ9UM73 1620 aa27.01■■□□□ 1.92
SCAMP4-213ENST00000621748 KCNA6P17658 529 aa27.01■■□□□ 1.91
SCAMP4-213ENST00000621748 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.01■■□□□ 1.91
SCAMP4-213ENST00000621748 XIRP1Q702N8 1843 aaKnown RBP27■■□□□ 1.91
SCAMP4-213ENST00000621748 SCAF1Q9H7N4 1312 aaKnown RBP27■■□□□ 1.91
SCAMP4-213ENST00000621748 SLC4A1APQ9BWU0 796 aaKnown RBP26.95■■□□□ 1.9
SCAMP4-213ENST00000621748 TBX22Q9Y458 520 aa26.94■■□□□ 1.9
SCAMP4-213ENST00000621748 TRPM2O94759 1503 aa26.94■■□□□ 1.9
SCAMP4-213ENST00000621748 CLTCL1P53675 1640 aa26.94■■□□□ 1.9
SCAMP4-213ENST00000621748 HSPA1LP34931 641 aa26.92■■□□□ 1.9
SCAMP4-213ENST00000621748 PROSER2Q86WR7 435 aaPredicted RBP26.92■■□□□ 1.9
SCAMP4-213ENST00000621748 RBM33Q96EV2 1170 aaKnown RBP26.92■■□□□ 1.9
SCAMP4-213ENST00000621748 TMEM94Q12767 1356 aa26.92■■□□□ 1.9
SCAMP4-213ENST00000621748 CHD2O14647 1828 aaKnown RBP26.92■■□□□ 1.9
SCAMP4-213ENST00000621748 NWD1Q149M9 1564 aa26.92■■□□□ 1.9
SCAMP4-213ENST00000621748 ADAMTS13Q76LX8 1427 aa26.91■■□□□ 1.9
SCAMP4-213ENST00000621748 ZNF326Q5BKZ1 582 aaKnown RBP26.9■■□□□ 1.9
SCAMP4-213ENST00000621748 NKTRP30414 1462 aaKnown RBP26.87■■□□□ 1.89
SCAMP4-213ENST00000621748 KIF1BO60333 1816 aa26.86■■□□□ 1.89
SCAMP4-213ENST00000621748 FOXD1Q16676 465 aa26.86■■□□□ 1.89
SCAMP4-213ENST00000621748 DIP2AQ14689 1571 aa26.84■■□□□ 1.89
SCAMP4-213ENST00000621748 NEXMIFQ5QGS0 1516 aa26.82■■□□□ 1.88
SCAMP4-213ENST00000621748 MPHOSPH9Q99550 1183 aa26.82■■□□□ 1.88
SCAMP4-213ENST00000621748 NRXN3Q9Y4C0 1643 aa26.82■■□□□ 1.88
SCAMP4-213ENST00000621748 DISP3Q9P2K9 1392 aa26.82■■□□□ 1.88
SCAMP4-213ENST00000621748 PIK3R4Q99570 1358 aa26.81■■□□□ 1.88
SCAMP4-213ENST00000621748 SETD5Q9C0A6 1442 aa26.79■■□□□ 1.88
SCAMP4-213ENST00000621748 SETBP1Q9Y6X0 1596 aa26.79■■□□□ 1.88
SCAMP4-213ENST00000621748 PTPRUQ92729 1446 aa26.77■■□□□ 1.88
SCAMP4-213ENST00000621748 AMOTL2Q9Y2J4 779 aa26.76■■□□□ 1.87
SCAMP4-213ENST00000621748 MSH6P52701 1360 aa26.74■■□□□ 1.87
SCAMP4-213ENST00000621748 FAM135BQ49AJ0 1406 aa26.73■■□□□ 1.87
SCAMP4-213ENST00000621748 METP08581 1390 aa26.72■■□□□ 1.87
SCAMP4-213ENST00000621748 NCOA3Q9Y6Q9 1424 aa26.71■■□□□ 1.87
SCAMP4-213ENST00000621748 RAB3GAP2Q9H2M9 1393 aa26.71■■□□□ 1.87
SCAMP4-213ENST00000621748 RPGRIP1LQ68CZ1 1315 aa26.7■■□□□ 1.87
SCAMP4-213ENST00000621748 ACIN1Q9UKV3 1341 aaKnown RBP26.7■■□□□ 1.87
SCAMP4-213ENST00000621748 VGFO15240 615 aaPredicted RBP26.7■■□□□ 1.86
SCAMP4-213ENST00000621748 CCDC144AA2RUR9 1427 aa26.69■■□□□ 1.86
SCAMP4-213ENST00000621748 C14orf37Q86TY3 774 aa26.68■■□□□ 1.86
SCAMP4-213ENST00000621748 SLAIN2Q9P270 581 aa26.68■■□□□ 1.86
SCAMP4-213ENST00000621748 XRN1Q8IZH2 1706 aaKnown RBP26.67■■□□□ 1.86
SCAMP4-213ENST00000621748 ROBO1Q9Y6N7 1651 aa26.66■■□□□ 1.86
SCAMP4-213ENST00000621748 PPLO60437 1756 aa26.66■■□□□ 1.86
SCAMP4-213ENST00000621748 ILDR2Q71H61 639 aa26.65■■□□□ 1.86
SCAMP4-213ENST00000621748 C19orf44Q9H6X5 657 aa26.65■■□□□ 1.86
SCAMP4-213ENST00000621748 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.64■■□□□ 1.85
SCAMP4-213ENST00000621748 RGL3Q3MIN7 710 aa26.63■■□□□ 1.85
SCAMP4-213ENST00000621748 SPATA31E1Q6ZUB1 1445 aa26.63■■□□□ 1.85
SCAMP4-213ENST00000621748 MED1Q15648 1581 aaPredicted RBP26.62■■□□□ 1.85
SCAMP4-213ENST00000621748 SETD1AO15047 1707 aaKnown RBP26.61■■□□□ 1.85
SCAMP4-213ENST00000621748 CADPS2Q86UW7 1296 aa26.59■■□□□ 1.85
SCAMP4-213ENST00000621748 ATF3P18847 181 aa26.58■■□□□ 1.85
SCAMP4-213ENST00000621748 ADGRF5Q8IZF2 1346 aa26.58■■□□□ 1.85
SCAMP4-213ENST00000621748 IFT172Q9UG01 1749 aa26.55■■□□□ 1.84
SCAMP4-213ENST00000621748 HRCP23327 699 aa26.53■■□□□ 1.84
SCAMP4-213ENST00000621748 ANKRD30BQ9BXX2 1392 aa26.52■■□□□ 1.84
SCAMP4-213ENST00000621748 DCCP43146 1447 aa26.5■■□□□ 1.83
SCAMP4-213ENST00000621748 ROBO2Q9HCK4 1378 aa26.5■■□□□ 1.83
SCAMP4-213ENST00000621748 PHLPP1O60346 1717 aa26.5■■□□□ 1.83
SCAMP4-213ENST00000621748 PTCH1Q13635 1447 aa26.48■■□□□ 1.83
SCAMP4-213ENST00000621748 ADGRL3Q9HAR2 1447 aa26.48■■□□□ 1.83
SCAMP4-213ENST00000621748 NALCNQ8IZF0 1738 aa26.48■■□□□ 1.83
SCAMP4-213ENST00000621748 PRAG1Q86YV5 1406 aa26.47■■□□□ 1.83
SCAMP4-213ENST00000621748 BRINP3Q76B58 766 aa26.45■■□□□ 1.82
SCAMP4-213ENST00000621748 MST1RQ04912 1400 aa26.45■■□□□ 1.82
SCAMP4-213ENST00000621748 PIK3C2GO75747 1445 aa26.44■■□□□ 1.82
SCAMP4-213ENST00000621748 PHF23Q9BUL5 403 aaPredicted RBP26.43■■□□□ 1.82
SCAMP4-213ENST00000621748 COL16A1Q07092 1604 aaPredicted RBP26.43■■□□□ 1.82
SCAMP4-213ENST00000621748 TMEM132EQ6IEE7 984 aa26.42■■□□□ 1.82
SCAMP4-213ENST00000621748 AHDC1Q5TGY3 1603 aaPredicted RBP26.4■■□□□ 1.82
SCAMP4-213ENST00000621748 STK26Q9P289 416 aa26.4■■□□□ 1.82
SCAMP4-213ENST00000621748 ASXL1Q8IXJ9 1541 aa26.39■■□□□ 1.82
SCAMP4-213ENST00000621748 NRXN1Q9ULB1 1477 aa26.38■■□□□ 1.81
SCAMP4-213ENST00000621748 JCADQ9P266 1359 aa26.38■■□□□ 1.81
SCAMP4-213ENST00000621748 LRPPRCP42704 1394 aaKnown RBP26.37■■□□□ 1.81
SCAMP4-213ENST00000621748 SOCS7O14512 581 aa26.37■■□□□ 1.81
SCAMP4-213ENST00000621748 C14orf93Q9H972 538 aaKnown RBP26.37■■□□□ 1.81
SCAMP4-213ENST00000621748 MYOM2P54296 1465 aa26.36■■□□□ 1.81
SCAMP4-213ENST00000621748 TECPR2O15040 1411 aa26.35■■□□□ 1.81
SCAMP4-213ENST00000621748 CFAP70Q5T0N1 1121 aa26.35■■□□□ 1.81
SCAMP4-213ENST00000621748 WAPLQ7Z5K2 1190 aa26.35■■□□□ 1.81
SCAMP4-213ENST00000621748 RGS17Q9UGC6 210 aaPredicted RBP26.35■■□□□ 1.81
SCAMP4-213ENST00000621748 ABCC11Q96J66 1382 aa26.34■■□□□ 1.81
SCAMP4-213ENST00000621748 C1orf167Q5SNV9 1468 aa26.34■■□□□ 1.81
SCAMP4-213ENST00000621748 YTHDC2Q9H6S0 1430 aaKnown RBP26.32■■□□□ 1.8
SCAMP4-213ENST00000621748 KNDC1Q76NI1 1749 aa26.31■■□□□ 1.8
SCAMP4-213ENST00000621748 DDX17Q92841 729 aaKnown RBP26.31■■□□□ 1.8
SCAMP4-213ENST00000621748 NHSL1Q5SYE7 1610 aa26.31■■□□□ 1.8
SCAMP4-213ENST00000621748 PLEKHH1Q9ULM0 1364 aa26.3■■□□□ 1.8
SCAMP4-213ENST00000621748 ORAI2Q96SN7 254 aa26.29■■□□□ 1.8
SCAMP4-213ENST00000621748 KDM2AQ9Y2K7 1162 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms