RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	BLM	P54132	1417 aa	Predicted RBP	18.82	■□□□□ 0.6
SMTN-223	ENST00000619644	CFAP70	Q5T0N1	1121 aa		18.81	■□□□□ 0.6
SMTN-223	ENST00000619644	MAGI2	Q86UL8	1455 aa		18.81	■□□□□ 0.6
SMTN-223	ENST00000619644	PRDM15	P57071	1507 aa	Predicted RBP	18.8	■□□□□ 0.6
SMTN-223	ENST00000619644	BCAR3	O75815	825 aa		18.8	■□□□□ 0.6
SMTN-223	ENST00000619644	FRAT1	Q92837	279 aa	Predicted RBP	18.79	■□□□□ 0.6
SMTN-223	ENST00000619644	TRAPPC8	Q9Y2L5	1435 aa		18.79	■□□□□ 0.6
SMTN-223	ENST00000619644	UBE2Q2	Q8WVN8	375 aa		18.78	■□□□□ 0.6
SMTN-223	ENST00000619644	SPINK5	Q9NQ38	1064 aa	Predicted RBP	18.78	■□□□□ 0.6
SMTN-223	ENST00000619644	CENPQ	Q7L2Z9	268 aa	Predicted RBP	18.78	■□□□□ 0.6
SMTN-223	ENST00000619644	MYO5C	Q9NQX4	1742 aa		18.77	■□□□□ 0.59
SMTN-223	ENST00000619644	DUOX2	Q9NRD8	1548 aa		18.76	■□□□□ 0.59
SMTN-223	ENST00000619644	ZMYM4	Q5VZL5	1548 aa		18.76	■□□□□ 0.59
SMTN-223	ENST00000619644	ERCC6L2	Q5T890	1561 aa		18.76	■□□□□ 0.59
SMTN-223	ENST00000619644	RRP7A	Q9Y3A4	280 aa	Known RBP	18.75	■□□□□ 0.59
SMTN-223	ENST00000619644	UNC13B	O14795	1591 aa		18.75	■□□□□ 0.59
SMTN-223	ENST00000619644	EIF5B	O60841	1220 aa	Known RBP	18.74	■□□□□ 0.59
SMTN-223	ENST00000619644	EIF2AK4	Q9P2K8	1649 aa	Known RBP	18.74	■□□□□ 0.59
SMTN-223	ENST00000619644	WDR7	Q9Y4E6	1490 aa		18.74	■□□□□ 0.59
SMTN-223	ENST00000619644	SLFN5	Q08AF3	891 aa		18.74	■□□□□ 0.59
SMTN-223	ENST00000619644	FAM161A	Q3B820	660 aa		18.72	■□□□□ 0.59
SMTN-223	ENST00000619644	IQGAP3	Q86VI3	1631 aa		18.72	■□□□□ 0.59
SMTN-223	ENST00000619644	MAST1	Q9Y2H9	1570 aa		18.71	■□□□□ 0.59
SMTN-223	ENST00000619644	DMRT2	Q9Y5R5	561 aa		18.71	■□□□□ 0.59
SMTN-223	ENST00000619644	PLCH2	O75038	1416 aa		18.71	■□□□□ 0.59
SMTN-223	ENST00000619644	TRAK1	Q9UPV9	953 aa		18.71	■□□□□ 0.59
SMTN-223	ENST00000619644	KANK1	Q14678	1352 aa		18.71	■□□□□ 0.59
SMTN-223	ENST00000619644	EIF3A	Q14152	1382 aa	Known RBP	18.7	■□□□□ 0.58
SMTN-223	ENST00000619644	ADGRF5	Q8IZF2	1346 aa		18.7	■□□□□ 0.58
SMTN-223	ENST00000619644	KDM2B	Q8NHM5	1336 aa		18.69	■□□□□ 0.58
SMTN-223	ENST00000619644	SCAF11	Q99590	1463 aa	Known RBP	18.69	■□□□□ 0.58
SMTN-223	ENST00000619644	COG6	Q9Y2V7	657 aa		18.69	■□□□□ 0.58
SMTN-223	ENST00000619644	PANK1	Q8TE04	598 aa		18.69	■□□□□ 0.58
SMTN-223	ENST00000619644	NUTM2D	Q5VT03	806 aa	Predicted RBP	18.68	■□□□□ 0.58
SMTN-223	ENST00000619644	BCL2L13	Q9BXK5	485 aa		18.68	■□□□□ 0.58
SMTN-223	ENST00000619644	CHD1	O14646	1710 aa		18.67	■□□□□ 0.58
SMTN-223	ENST00000619644	MORC1	Q86VD1	984 aa		18.67	■□□□□ 0.58
SMTN-223	ENST00000619644	ABCC2	Q92887	1545 aa		18.67	■□□□□ 0.58
SMTN-223	ENST00000619644	CARD14	Q9BXL6	1004 aa		18.67	■□□□□ 0.58
SMTN-223	ENST00000619644	ASXL1	Q8IXJ9	1541 aa		18.66	■□□□□ 0.58
SMTN-223	ENST00000619644		E9PSI1	815 aa		18.66	■□□□□ 0.58
SMTN-223	ENST00000619644	SCAPER	Q9BY12	1400 aa		18.66	■□□□□ 0.58
SMTN-223	ENST00000619644	FRAT2	O75474	233 aa	Predicted RBP	18.65	■□□□□ 0.58
SMTN-223	ENST00000619644	C8orf34	Q49A92	452 aa		18.65	■□□□□ 0.58
SMTN-223	ENST00000619644	ZNF521	Q96K83	1311 aa		18.65	■□□□□ 0.58
SMTN-223	ENST00000619644	PLXNC1	O60486	1568 aa		18.65	■□□□□ 0.58
SMTN-223	ENST00000619644	TMEM132E	Q6IEE7	984 aa		18.64	■□□□□ 0.58
SMTN-223	ENST00000619644	ATP10A	O60312	1499 aa		18.64	■□□□□ 0.57
SMTN-223	ENST00000619644	CENPJ	Q9HC77	1338 aa	Predicted RBP	18.64	■□□□□ 0.57
SMTN-223	ENST00000619644	CLUAP1	Q96AJ1	413 aa		18.64	■□□□□ 0.57
SMTN-223	ENST00000619644	IGHD	P01880	384 aa		18.64	■□□□□ 0.57
SMTN-223	ENST00000619644	SAFB2	Q14151	953 aa	Known RBP eCLIP	18.64	■□□□□ 0.57
SMTN-223	ENST00000619644	GGT6	Q6P531	493 aa		18.64	■□□□□ 0.57
SMTN-223	ENST00000619644	SLC12A5	Q9H2X9	1139 aa		18.64	■□□□□ 0.57
SMTN-223	ENST00000619644	LAMC1	P11047	1609 aa		18.62	■□□□□ 0.57
SMTN-223	ENST00000619644	INSR	P06213	1382 aa		18.62	■□□□□ 0.57
SMTN-223	ENST00000619644	NKTR	P30414	1462 aa	Known RBP	18.6	■□□□□ 0.57
SMTN-223	ENST00000619644	MADD	Q8WXG6	1647 aa		18.6	■□□□□ 0.57
SMTN-223	ENST00000619644	UGGT1	Q9NYU2	1555 aa		18.6	■□□□□ 0.57
SMTN-223	ENST00000619644	WWC1	Q8IX03	1113 aa		18.6	■□□□□ 0.57
SMTN-223	ENST00000619644	FAM43A	Q8N2R8	423 aa		18.6	■□□□□ 0.57
SMTN-223	ENST00000619644	PIK3C2G	O75747	1445 aa		18.59	■□□□□ 0.57
SMTN-223	ENST00000619644	RSPH6A	Q9H0K4	717 aa		18.58	■□□□□ 0.57
SMTN-223	ENST00000619644	ABCC1	P33527	1531 aa		18.57	■□□□□ 0.56
SMTN-223	ENST00000619644	STAC3	Q96MF2	364 aa		18.57	■□□□□ 0.56
SMTN-223	ENST00000619644	TCP11L2	Q8N4U5	519 aa		18.57	■□□□□ 0.56
SMTN-223	ENST00000619644	TNN	Q9UQP3	1299 aa		18.57	■□□□□ 0.56
SMTN-223	ENST00000619644	CLTCL1	P53675	1640 aa		18.57	■□□□□ 0.56
SMTN-223	ENST00000619644	SLK	Q9H2G2	1235 aa	Predicted RBP	18.56	■□□□□ 0.56
SMTN-223	ENST00000619644	RNF17	Q9BXT8	1623 aa	Known RBP	18.56	■□□□□ 0.56
SMTN-223	ENST00000619644	SYNM	O15061	1565 aa		18.55	■□□□□ 0.56
SMTN-223	ENST00000619644	MTHFS	P49914	203 aa		18.55	■□□□□ 0.56
SMTN-223	ENST00000619644	ZCCHC11	Q5TAX3	1644 aa	Known RBP	18.55	■□□□□ 0.56
SMTN-223	ENST00000619644	TRMT2A	Q8IZ69	625 aa	Known RBP	18.55	■□□□□ 0.56
SMTN-223	ENST00000619644	TRPM2	O94759	1503 aa		18.54	■□□□□ 0.56
SMTN-223	ENST00000619644	CGNL1	Q0VF96	1302 aa		18.54	■□□□□ 0.56
SMTN-223	ENST00000619644	U2AF1L5	P0DN76	240 aa	Predicted RBP	18.54	■□□□□ 0.56
SMTN-223	ENST00000619644	U2AF1	Q01081	240 aa	Known RBP eCLIP	18.54	■□□□□ 0.56
SMTN-223	ENST00000619644	NSD3	Q9BZ95	1437 aa		18.54	■□□□□ 0.56
SMTN-223	ENST00000619644	SEC24B	O95487	1268 aa		18.53	■□□□□ 0.56
SMTN-223	ENST00000619644	CFAP65	Q6ZU64	1925 aa	Known RBP	18.53	■□□□□ 0.56
SMTN-223	ENST00000619644	SLC24A1	O60721	1099 aa		18.53	■□□□□ 0.56
SMTN-223	ENST00000619644	FANCA	O15360	1455 aa		18.53	■□□□□ 0.56
SMTN-223	ENST00000619644	IQGAP1	P46940	1657 aa		18.53	■□□□□ 0.56
SMTN-223	ENST00000619644	U2SURP	O15042	1029 aa	Known RBP	18.51	■□□□□ 0.55
SMTN-223	ENST00000619644	SPRYD3	Q8NCJ5	442 aa		18.51	■□□□□ 0.55
SMTN-223	ENST00000619644	RUNDC1	Q96C34	613 aa		18.51	■□□□□ 0.55
SMTN-223	ENST00000619644	CFAP53	Q96M91	514 aa		18.51	■□□□□ 0.55
SMTN-223	ENST00000619644	ARX	Q96QS3	562 aa		18.51	■□□□□ 0.55
SMTN-223	ENST00000619644	STK26	Q9P289	416 aa		18.51	■□□□□ 0.55
SMTN-223	ENST00000619644	ERVK-7	P63135	1459 aa		18.51	■□□□□ 0.55
SMTN-223	ENST00000619644	PTPRT	O14522	1441 aa		18.5	■□□□□ 0.55
SMTN-223	ENST00000619644	NOS1	P29475	1434 aa		18.5	■□□□□ 0.55
SMTN-223	ENST00000619644	SPHKAP	Q2M3C7	1700 aa		18.5	■□□□□ 0.55
SMTN-223	ENST00000619644	PDE3A	Q14432	1141 aa		18.5	■□□□□ 0.55
SMTN-223	ENST00000619644	KDM5A	P29375	1690 aa	Known RBP	18.5	■□□□□ 0.55
SMTN-223	ENST00000619644	ZFYVE16	Q7Z3T8	1539 aa		18.49	■□□□□ 0.55
SMTN-223	ENST00000619644	ADGRL1	O94910	1474 aa		18.49	■□□□□ 0.55
SMTN-223	ENST00000619644	NPC1L1	Q9UHC9	1359 aa		18.48	■□□□□ 0.55
SMTN-223	ENST00000619644	RLBP1	P12271	317 aa		18.48	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms