RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 BRD4O60885 1362 aaPredicted RBP3.76□□□□□ -1.81
LPP-221ENST00000618621 G3V3G9 751 aa3.76□□□□□ -1.81
LPP-221ENST00000618621 DCAF8Q5TAQ9 597 aa3.76□□□□□ -1.81
LPP-221ENST00000618621 MAP7D2Q96T17 732 aa3.76□□□□□ -1.81
LPP-221ENST00000618621 REC8O95072 547 aa3.75□□□□□ -1.81
LPP-221ENST00000618621 PANK1Q8TE04 598 aa3.75□□□□□ -1.81
LPP-221ENST00000618621 NUCB2P80303 420 aa3.75□□□□□ -1.81
LPP-221ENST00000618621 GNL2Q13823 731 aaKnown RBP3.75□□□□□ -1.81
LPP-221ENST00000618621 GOLGA6L1Q8N7Z2 621 aa3.75□□□□□ -1.81
LPP-221ENST00000618621 MCM4P33991 863 aa3.75□□□□□ -1.81
LPP-221ENST00000618621 STK31Q9BXU1 1019 aa3.75□□□□□ -1.81
LPP-221ENST00000618621 NCAPD3P42695 1498 aa3.75□□□□□ -1.81
LPP-221ENST00000618621 CLUAP1Q96AJ1 413 aa3.75□□□□□ -1.81
LPP-221ENST00000618621 PPP4R4Q6NUP7 873 aa3.75□□□□□ -1.81
LPP-221ENST00000618621 CGNL1Q0VF96 1302 aa3.75□□□□□ -1.81
LPP-221ENST00000618621 KIF20AO95235 890 aa3.75□□□□□ -1.81
LPP-221ENST00000618621 RRP7AQ9Y3A4 280 aaKnown RBP3.75□□□□□ -1.81
LPP-221ENST00000618621 USP47Q96K76 1375 aa3.75□□□□□ -1.81
LPP-221ENST00000618621 RBM10P98175 930 aaKnown RBP3.75□□□□□ -1.81
LPP-221ENST00000618621 KIF3AQ9Y496 699 aa3.75□□□□□ -1.81
LPP-221ENST00000618621 LETM1O95202 739 aaPredicted RBP3.75□□□□□ -1.81
LPP-221ENST00000618621 TRAK2O60296 914 aa3.75□□□□□ -1.81
LPP-221ENST00000618621 PHLDB1Q86UU1 1377 aa3.75□□□□□ -1.81
LPP-221ENST00000618621 ARHGAP35Q9NRY4 1499 aa3.75□□□□□ -1.81
LPP-221ENST00000618621 CHMP4BP1P59074 171 aa3.74□□□□□ -1.81
LPP-221ENST00000618621 PDE3AQ14432 1141 aa3.74□□□□□ -1.81
LPP-221ENST00000618621 TRIM6-TRIM34B2RNG4 842 aa3.74□□□□□ -1.81
LPP-221ENST00000618621 FMN1Q68DA7 1419 aa3.74□□□□□ -1.81
LPP-221ENST00000618621 RBM25P49756 843 aaKnown RBP3.74□□□□□ -1.81
LPP-221ENST00000618621 C22orf23Q9BZE7 217 aa3.74□□□□□ -1.81
LPP-221ENST00000618621 DZIP1LQ8IYY4 767 aaKnown RBP3.74□□□□□ -1.81
LPP-221ENST00000618621 PRM3Q9NNZ6 103 aa3.74□□□□□ -1.81
LPP-221ENST00000618621 SF3A1Q15459 793 aaKnown RBP3.74□□□□□ -1.81
LPP-221ENST00000618621 PUS7Q96PZ0 661 aaKnown RBP3.74□□□□□ -1.81
LPP-221ENST00000618621 DDX19BQ9UMR2 479 aa3.74□□□□□ -1.81
LPP-221ENST00000618621 WIZO95785 1651 aa3.74□□□□□ -1.81
LPP-221ENST00000618621 KANK1Q14678 1352 aa3.74□□□□□ -1.81
LPP-221ENST00000618621 MEX3CQ5U5Q3 659 aaKnown RBP3.74□□□□□ -1.81
LPP-221ENST00000618621 ANKRD30AQ9BXX3 1397 aa3.74□□□□□ -1.81
LPP-221ENST00000618621 RRP9O43818 475 aaKnown RBP3.74□□□□□ -1.81
LPP-221ENST00000618621 DDX49Q9Y6V7 483 aaKnown RBP3.74□□□□□ -1.81
LPP-221ENST00000618621 H3BQV1 296 aa3.74□□□□□ -1.81
LPP-221ENST00000618621 TPM3P06753 285 aa3.74□□□□□ -1.81
LPP-221ENST00000618621 CT47B1P0C2W7 299 aaPredicted RBP3.74□□□□□ -1.81
LPP-221ENST00000618621 IFFO2Q5TF58 517 aa3.74□□□□□ -1.81
LPP-221ENST00000618621 RUFY2Q8WXA3 655 aa3.74□□□□□ -1.81
LPP-221ENST00000618621 APBB1O00213 710 aa3.74□□□□□ -1.81
LPP-221ENST00000618621 RAPGEF3O95398 923 aa3.74□□□□□ -1.81
LPP-221ENST00000618621 TSR1Q2NL82 804 aaKnown RBP3.74□□□□□ -1.81
LPP-221ENST00000618621 WDR63Q8IWG1 891 aa3.74□□□□□ -1.81
LPP-221ENST00000618621 TEX35Q5T0J7 233 aa3.73□□□□□ -1.81
LPP-221ENST00000618621 RIPK4P57078 832 aa3.73□□□□□ -1.81
LPP-221ENST00000618621 ZNF592Q92610 1267 aa3.73□□□□□ -1.81
LPP-221ENST00000618621 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.73□□□□□ -1.81
LPP-221ENST00000618621 FOXD4L1Q9NU39 408 aa3.73□□□□□ -1.81
LPP-221ENST00000618621 SMARCA2P51531 1590 aa3.73□□□□□ -1.81
LPP-221ENST00000618621 RRP12Q5JTH9 1297 aaKnown RBP3.73□□□□□ -1.81
LPP-221ENST00000618621 ISY1Q9ULR0 285 aaKnown RBP3.73□□□□□ -1.81
LPP-221ENST00000618621 VGFO15240 615 aaPredicted RBP3.73□□□□□ -1.81
LPP-221ENST00000618621 RRBP1Q9P2E9 1410 aaKnown RBP3.73□□□□□ -1.81
LPP-221ENST00000618621 TPM2P07951 284 aa3.73□□□□□ -1.81
LPP-221ENST00000618621 LRRFIP1Q32MZ4 808 aaKnown RBP3.73□□□□□ -1.81
LPP-221ENST00000618621 API5Q9BZZ5 524 aaKnown RBP3.73□□□□□ -1.81
LPP-221ENST00000618621 FAM13BQ9NYF5 915 aa3.73□□□□□ -1.81
LPP-221ENST00000618621 MCM2P49736 904 aa3.73□□□□□ -1.81
LPP-221ENST00000618621 INTS3Q68E01 1043 aaKnown RBP3.73□□□□□ -1.81
LPP-221ENST00000618621 NPM3O75607 178 aaKnown RBP3.72□□□□□ -1.81
LPP-221ENST00000618621 ZKSCAN1P17029 563 aaPredicted RBP3.72□□□□□ -1.81
LPP-221ENST00000618621 RUNDC1Q96C34 613 aa3.72□□□□□ -1.81
LPP-221ENST00000618621 CCDC39Q9UFE4 941 aa3.72□□□□□ -1.81
LPP-221ENST00000618621 AMPHP49418 695 aa3.72□□□□□ -1.81
LPP-221ENST00000618621 G3BP1Q13283 466 aaKnown RBP eCLIP3.72□□□□□ -1.81
LPP-221ENST00000618621 GPS2Q13227 327 aa3.72□□□□□ -1.81
LPP-221ENST00000618621 NBPF1Q3BBV0 1214 aa3.72□□□□□ -1.81
LPP-221ENST00000618621 TMEM132EQ6IEE7 984 aa3.72□□□□□ -1.81
LPP-221ENST00000618621 SLC4A10Q6U841 1118 aa3.72□□□□□ -1.81
LPP-221ENST00000618621 HSP90AB4PQ58FF6 505 aa3.72□□□□□ -1.81
LPP-221ENST00000618621 NASPP49321 788 aaPredicted RBP3.72□□□□□ -1.81
LPP-221ENST00000618621 GON4LQ3T8J9 2241 aa3.72□□□□□ -1.81
LPP-221ENST00000618621 SLFN5Q08AF3 891 aa3.72□□□□□ -1.81
LPP-221ENST00000618621 LTV1Q96GA3 475 aaPredicted RBP3.72□□□□□ -1.81
LPP-221ENST00000618621 KIF16BQ96L93 1317 aa3.72□□□□□ -1.81
LPP-221ENST00000618621 FOXD4L5Q5VV16 416 aaPredicted RBP3.72□□□□□ -1.81
LPP-221ENST00000618621 FOXD4L4Q8WXT5 416 aaPredicted RBP3.72□□□□□ -1.81
LPP-221ENST00000618621 NPHP1O15259 732 aa3.72□□□□□ -1.81
LPP-221ENST00000618621 C20orf194Q5TEA3 1177 aa3.72□□□□□ -1.81
LPP-221ENST00000618621 ESPNB1AK53 854 aa3.72□□□□□ -1.81
LPP-221ENST00000618621 FAM184AQ8NB25 1140 aa3.72□□□□□ -1.81
LPP-221ENST00000618621 NECTIN2Q92692 538 aa3.72□□□□□ -1.81
LPP-221ENST00000618621 UACAQ9BZF9 1416 aa3.71□□□□□ -1.81
LPP-221ENST00000618621 EVC2Q86UK5 1308 aa3.71□□□□□ -1.81
LPP-221ENST00000618621 TOP2AP11388 1531 aaKnown RBP3.71□□□□□ -1.81
LPP-221ENST00000618621 PPP2R1AP30153 589 aa3.71□□□□□ -1.82
LPP-221ENST00000618621 PDZRN3Q9UPQ7 1066 aa3.71□□□□□ -1.82
LPP-221ENST00000618621 RABEP1Q15276 862 aa3.71□□□□□ -1.82
LPP-221ENST00000618621 AKAP17AQ02040 695 aaKnown RBP3.71□□□□□ -1.82
LPP-221ENST00000618621 COG3Q96JB2 828 aa3.71□□□□□ -1.82
LPP-221ENST00000618621 CIZ1Q9ULV3 898 aaPredicted RBP3.71□□□□□ -1.82
LPP-221ENST00000618621 GOLGA6L19H0YKK7 550 aa3.71□□□□□ -1.82
LPP-221ENST00000618621 DIAPH3Q9NSV4 1193 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms