RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 POGKQ9P215 609 aa6.62□□□□□ -1.35
SYCP1-210ENST00000618516 RIMS2Q9UQ26 1411 aa6.61□□□□□ -1.35
SYCP1-210ENST00000618516 CERKQ8TCT0 537 aa6.61□□□□□ -1.35
SYCP1-210ENST00000618516 MAST1Q9Y2H9 1570 aa6.61□□□□□ -1.35
SYCP1-210ENST00000618516 MINK1Q8N4C8 1332 aaPredicted RBP6.61□□□□□ -1.35
SYCP1-210ENST00000618516 HDGFP51858 240 aaKnown RBP6.61□□□□□ -1.35
SYCP1-210ENST00000618516 CEP170BQ9Y4F5 1589 aaPredicted RBP6.61□□□□□ -1.35
SYCP1-210ENST00000618516 TONSLQ96HA7 1378 aa6.61□□□□□ -1.35
SYCP1-210ENST00000618516 VGFO15240 615 aaPredicted RBP6.61□□□□□ -1.35
SYCP1-210ENST00000618516 SOX12O15370 315 aa6.6□□□□□ -1.35
SYCP1-210ENST00000618516 PLA2R1Q13018 1463 aa6.6□□□□□ -1.35
SYCP1-210ENST00000618516 NPHP4O75161 1426 aaPredicted RBP6.6□□□□□ -1.35
SYCP1-210ENST00000618516 EFCAB6Q5THR3 1501 aa6.59□□□□□ -1.35
SYCP1-210ENST00000618516 ZBTB7CA1YPR0 619 aa6.59□□□□□ -1.35
SYCP1-210ENST00000618516 A2ML1A8K2U0 1454 aa6.59□□□□□ -1.35
SYCP1-210ENST00000618516 DHX57Q6P158 1386 aaKnown RBP6.59□□□□□ -1.35
SYCP1-210ENST00000618516 NUTM2BA6NNL0 878 aaPredicted RBP6.59□□□□□ -1.36
SYCP1-210ENST00000618516 NUTM2EB1AL46 878 aaPredicted RBP6.59□□□□□ -1.36
SYCP1-210ENST00000618516 NUTM2AQ8IVF1 878 aaPredicted RBP6.59□□□□□ -1.36
SYCP1-210ENST00000618516 PMFBP1Q8TBY8 1022 aa6.59□□□□□ -1.36
SYCP1-210ENST00000618516 METP08581 1390 aa6.58□□□□□ -1.36
SYCP1-210ENST00000618516 PIK3C2BO00750 1634 aa6.58□□□□□ -1.36
SYCP1-210ENST00000618516 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.58□□□□□ -1.36
SYCP1-210ENST00000618516 PRAM1Q96QH2 718 aa6.58□□□□□ -1.36
SYCP1-210ENST00000618516 SCAF11Q99590 1463 aaKnown RBP6.58□□□□□ -1.36
SYCP1-210ENST00000618516 SYNMO15061 1565 aa6.58□□□□□ -1.36
SYCP1-210ENST00000618516 TMEM94Q12767 1356 aa6.58□□□□□ -1.36
SYCP1-210ENST00000618516 MYO3AQ8NEV4 1616 aa6.58□□□□□ -1.36
SYCP1-210ENST00000618516 E9PCH4 1651 aa6.58□□□□□ -1.36
SYCP1-210ENST00000618516 ATF3P18847 181 aa6.58□□□□□ -1.36
SYCP1-210ENST00000618516 NUTM2GQ5VZR2 741 aa6.58□□□□□ -1.36
SYCP1-210ENST00000618516 REREQ9P2R6 1566 aa6.57□□□□□ -1.36
SYCP1-210ENST00000618516 PAK3O75914 559 aaPredicted RBP6.57□□□□□ -1.36
SYCP1-210ENST00000618516 ESCO1Q5FWF5 840 aa6.57□□□□□ -1.36
SYCP1-210ENST00000618516 PREX1Q8TCU6 1659 aa6.57□□□□□ -1.36
SYCP1-210ENST00000618516 ANKRD30BQ9BXX2 1392 aa6.57□□□□□ -1.36
SYCP1-210ENST00000618516 FOXO3O43524 673 aa6.56□□□□□ -1.36
SYCP1-210ENST00000618516 MAPK8IP2Q13387 824 aaPredicted RBP6.56□□□□□ -1.36
SYCP1-210ENST00000618516 NLRP1Q9C000 1473 aa6.56□□□□□ -1.36
SYCP1-210ENST00000618516 NBPF8Q3BBV2 869 aa6.56□□□□□ -1.36
SYCP1-210ENST00000618516 CARD11Q9BXL7 1154 aa6.56□□□□□ -1.36
SYCP1-210ENST00000618516 GOLGB1Q14789 3259 aaKnown RBP6.56□□□□□ -1.36
SYCP1-210ENST00000618516 RNF17Q9BXT8 1623 aaKnown RBP6.56□□□□□ -1.36
SYCP1-210ENST00000618516 SRPK2P78362 688 aaKnown RBP6.56□□□□□ -1.36
SYCP1-210ENST00000618516 TMC1Q8TDI8 760 aa6.56□□□□□ -1.36
SYCP1-210ENST00000618516 ORAI2Q96SN7 254 aa6.56□□□□□ -1.36
SYCP1-210ENST00000618516 EIF2AK4Q9P2K8 1649 aaKnown RBP6.55□□□□□ -1.36
SYCP1-210ENST00000618516 TOM1O60784 492 aa6.55□□□□□ -1.36
SYCP1-210ENST00000618516 HSPA1LP34931 641 aa6.55□□□□□ -1.36
SYCP1-210ENST00000618516 ARHGAP31Q2M1Z3 1444 aa6.55□□□□□ -1.36
SYCP1-210ENST00000618516 MYO5BQ9ULV0 1848 aa6.55□□□□□ -1.36
SYCP1-210ENST00000618516 PLEKHH1Q9ULM0 1364 aa6.55□□□□□ -1.36
SYCP1-210ENST00000618516 CLTCL1P53675 1640 aa6.54□□□□□ -1.36
SYCP1-210ENST00000618516 SPATA31D1Q6ZQQ2 1576 aa6.54□□□□□ -1.36
SYCP1-210ENST00000618516 TET3O43151 1660 aa6.54□□□□□ -1.36
SYCP1-210ENST00000618516 GCC2Q8IWJ2 1684 aa6.54□□□□□ -1.36
SYCP1-210ENST00000618516 HAP1P54257 671 aaPredicted RBP6.54□□□□□ -1.36
SYCP1-210ENST00000618516 ADAMTS2O95450 1211 aa6.54□□□□□ -1.36
SYCP1-210ENST00000618516 POTEHQ6S545 545 aa6.54□□□□□ -1.36
SYCP1-210ENST00000618516 CABP2Q9NPB3 220 aa6.54□□□□□ -1.36
SYCP1-210ENST00000618516 EP400Q96L91 3159 aa6.53□□□□□ -1.36
SYCP1-210ENST00000618516 UNC13BO14795 1591 aa6.53□□□□□ -1.36
SYCP1-210ENST00000618516 IQGAP3Q86VI3 1631 aa6.53□□□□□ -1.36
SYCP1-210ENST00000618516 ROCK2O75116 1388 aaKnown RBP6.53□□□□□ -1.36
SYCP1-210ENST00000618516 SLAIN2Q9P270 581 aa6.53□□□□□ -1.36
SYCP1-210ENST00000618516 DEPDC5O75140 1603 aa6.53□□□□□ -1.36
SYCP1-210ENST00000618516 HOXD11P31277 338 aaPredicted RBP6.52□□□□□ -1.37
SYCP1-210ENST00000618516 CABLES1Q8TDN4 633 aa6.52□□□□□ -1.37
SYCP1-210ENST00000618516 TBX22Q9Y458 520 aa6.52□□□□□ -1.37
SYCP1-210ENST00000618516 RPRD2Q5VT52 1461 aaKnown RBP6.52□□□□□ -1.37
SYCP1-210ENST00000618516 UTRNP46939 3433 aa6.52□□□□□ -1.37
SYCP1-210ENST00000618516 ROBO2Q9HCK4 1378 aa6.52□□□□□ -1.37
SYCP1-210ENST00000618516 STRCQ7RTU9 1775 aa6.52□□□□□ -1.37
SYCP1-210ENST00000618516 VWDEQ8N2E2 1590 aa6.52□□□□□ -1.37
SYCP1-210ENST00000618516 MSH6P52701 1360 aa6.51□□□□□ -1.37
SYCP1-210ENST00000618516 NGDNQ8NEJ9 315 aaKnown RBP6.51□□□□□ -1.37
SYCP1-210ENST00000618516 PTPRTO14522 1441 aa6.51□□□□□ -1.37
SYCP1-210ENST00000618516 ADGRB3O60242 1522 aa6.51□□□□□ -1.37
SYCP1-210ENST00000618516 ST20-MTHFSA0A0A6YYL1 179 aa6.51□□□□□ -1.37
SYCP1-210ENST00000618516 PTPRUQ92729 1446 aa6.51□□□□□ -1.37
SYCP1-210ENST00000618516 LMTK2Q8IWU2 1503 aa6.51□□□□□ -1.37
SYCP1-210ENST00000618516 SPHKAPQ2M3C7 1700 aa6.5□□□□□ -1.37
SYCP1-210ENST00000618516 UBR1Q8IWV7 1749 aa6.5□□□□□ -1.37
SYCP1-210ENST00000618516 A0A0G2JS52 829 aa6.5□□□□□ -1.37
SYCP1-210ENST00000618516 MYT1Q01538 1121 aa6.5□□□□□ -1.37
SYCP1-210ENST00000618516 FBXO41Q8TF61 875 aa6.5□□□□□ -1.37
SYCP1-210ENST00000618516 C19orf44Q9H6X5 657 aa6.5□□□□□ -1.37
SYCP1-210ENST00000618516 PLEKHG1Q9ULL1 1385 aa6.5□□□□□ -1.37
SYCP1-210ENST00000618516 ADAMTS13Q76LX8 1427 aa6.5□□□□□ -1.37
SYCP1-210ENST00000618516 TNNT2P45379 298 aaPredicted RBP6.5□□□□□ -1.37
SYCP1-210ENST00000618516 MEX3CQ5U5Q3 659 aaKnown RBP6.5□□□□□ -1.37
SYCP1-210ENST00000618516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.5□□□□□ -1.37
SYCP1-210ENST00000618516 ZFYVE9O95405 1425 aa6.5□□□□□ -1.37
SYCP1-210ENST00000618516 MROH2AA6NES4 1674 aa6.5□□□□□ -1.37
SYCP1-210ENST00000618516 ZC3H13Q5T200 1668 aaKnown RBP6.5□□□□□ -1.37
SYCP1-210ENST00000618516 C14orf93Q9H972 538 aaKnown RBP6.5□□□□□ -1.37
SYCP1-210ENST00000618516 USP35Q9P2H5 1018 aa6.5□□□□□ -1.37
SYCP1-210ENST00000618516 TRPM2O94759 1503 aa6.49□□□□□ -1.37
SYCP1-210ENST00000618516 TMEM131LA2VDJ0 1609 aa6.49□□□□□ -1.37
SYCP1-210ENST00000618516 PSME1Q06323 249 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms