RNA–Protein interactions for RNA: ENST00000614800.4

SNX9-203, Transcript of sorting nexin 9, humanhuman

TSL 4

Gene SNX9, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-203ENST00000614800 CARD11Q9BXL7 1154 aa9.25□□□□□ -0.93
SNX9-203ENST00000614800 ESF1Q9H501 851 aaKnown RBP9.25□□□□□ -0.93
SNX9-203ENST00000614800 RALGAPBQ86X10 1494 aa9.24□□□□□ -0.93
SNX9-203ENST00000614800 ADRA2BP18089 450 aa9.24□□□□□ -0.93
SNX9-203ENST00000614800 HIRIP3Q9BW71 556 aaPredicted RBP9.24□□□□□ -0.93
SNX9-203ENST00000614800 ABCC3O15438 1527 aa9.24□□□□□ -0.93
SNX9-203ENST00000614800 ROCK2O75116 1388 aaKnown RBP9.24□□□□□ -0.93
SNX9-203ENST00000614800 STRCP1A6NGW2 1772 aa9.23□□□□□ -0.93
SNX9-203ENST00000614800 DDX10Q13206 875 aaKnown RBP9.23□□□□□ -0.93
SNX9-203ENST00000614800 ZNF335Q9H4Z2 1342 aaPredicted RBP9.23□□□□□ -0.93
SNX9-203ENST00000614800 ARHGAP31Q2M1Z3 1444 aa9.22□□□□□ -0.93
SNX9-203ENST00000614800 SPATA31E1Q6ZUB1 1445 aa9.22□□□□□ -0.93
SNX9-203ENST00000614800 PRAG1Q86YV5 1406 aa9.22□□□□□ -0.93
SNX9-203ENST00000614800 CEP152O94986 1710 aa9.22□□□□□ -0.93
SNX9-203ENST00000614800 ZMYM3Q14202 1370 aa9.22□□□□□ -0.93
SNX9-203ENST00000614800 USP47Q96K76 1375 aa9.22□□□□□ -0.93
SNX9-203ENST00000614800 CLTCL1P53675 1640 aa9.21□□□□□ -0.93
SNX9-203ENST00000614800 CHGAP10645 457 aaKnown RBP9.21□□□□□ -0.94
SNX9-203ENST00000614800 MIER1Q8N108 512 aa9.21□□□□□ -0.94
SNX9-203ENST00000614800 SLC52A1Q9NWF4 448 aa9.21□□□□□ -0.94
SNX9-203ENST00000614800 RPGRIP1LQ68CZ1 1315 aa9.21□□□□□ -0.94
SNX9-203ENST00000614800 ANP32CO43423 234 aa9.2□□□□□ -0.94
SNX9-203ENST00000614800 KIF1BO60333 1816 aa9.19□□□□□ -0.94
SNX9-203ENST00000614800 PIAS4Q8N2W9 510 aaPredicted RBP9.19□□□□□ -0.94
SNX9-203ENST00000614800 UBR1Q8IWV7 1749 aa9.19□□□□□ -0.94
SNX9-203ENST00000614800 XIRP1Q702N8 1843 aaKnown RBP9.19□□□□□ -0.94
SNX9-203ENST00000614800 UBAP1LF5GYI3 381 aa9.18□□□□□ -0.94
SNX9-203ENST00000614800 MED14O60244 1454 aa9.18□□□□□ -0.94
SNX9-203ENST00000614800 SLC24A1O60721 1099 aa9.18□□□□□ -0.94
SNX9-203ENST00000614800 NOS1P29475 1434 aa9.18□□□□□ -0.94
SNX9-203ENST00000614800 GPRASP1Q5JY77 1395 aa9.18□□□□□ -0.94
SNX9-203ENST00000614800 NLRP1Q9C000 1473 aa9.18□□□□□ -0.94
SNX9-203ENST00000614800 LAMC1P11047 1609 aa9.17□□□□□ -0.94
SNX9-203ENST00000614800 TRPM1Q7Z4N2 1603 aa9.17□□□□□ -0.94
SNX9-203ENST00000614800 UGGT1Q9NYU2 1555 aa9.17□□□□□ -0.94
SNX9-203ENST00000614800 MYOM2P54296 1465 aa9.17□□□□□ -0.94
SNX9-203ENST00000614800 CCDC7Q96M83 1385 aa9.17□□□□□ -0.94
SNX9-203ENST00000614800 WASHC2AQ641Q2 1341 aa9.16□□□□□ -0.94
SNX9-203ENST00000614800 NCKAP5LQ9HCH0 1330 aa9.16□□□□□ -0.94
SNX9-203ENST00000614800 VGFO15240 615 aaPredicted RBP9.16□□□□□ -0.94
SNX9-203ENST00000614800 CENPBP07199 599 aaPredicted RBP9.16□□□□□ -0.94
SNX9-203ENST00000614800 STAG3Q9UJ98 1225 aa9.16□□□□□ -0.94
SNX9-203ENST00000614800 EIF3AQ14152 1382 aaKnown RBP9.15□□□□□ -0.94
SNX9-203ENST00000614800 ST20-MTHFSA0A0A6YYL1 179 aa9.15□□□□□ -0.94
SNX9-203ENST00000614800 ADGRB3O60242 1522 aa9.15□□□□□ -0.95
SNX9-203ENST00000614800 TNRQ92752 1358 aa9.14□□□□□ -0.95
SNX9-203ENST00000614800 KDM5AP29375 1690 aaKnown RBP9.14□□□□□ -0.95
SNX9-203ENST00000614800 KIF7Q2M1P5 1343 aa9.14□□□□□ -0.95
SNX9-203ENST00000614800 NBPF1Q3BBV0 1214 aa9.14□□□□□ -0.95
SNX9-203ENST00000614800 CDCA8Q53HL2 280 aa9.14□□□□□ -0.95
SNX9-203ENST00000614800 CCER2I3L3R5 266 aa9.13□□□□□ -0.95
SNX9-203ENST00000614800 TMF1P82094 1093 aa9.13□□□□□ -0.95
SNX9-203ENST00000614800 IDI1Q13907 227 aa9.13□□□□□ -0.95
SNX9-203ENST00000614800 POLR3GLQ9BT43 218 aa9.13□□□□□ -0.95
SNX9-203ENST00000614800 KIAA1210Q9ULL0 1709 aa9.13□□□□□ -0.95
SNX9-203ENST00000614800 NPHP4O75161 1426 aaPredicted RBP9.13□□□□□ -0.95
SNX9-203ENST00000614800 PIK3C2BO00750 1634 aa9.13□□□□□ -0.95
SNX9-203ENST00000614800 SETD1AO15047 1707 aaKnown RBP9.12□□□□□ -0.95
SNX9-203ENST00000614800 HDGFP51858 240 aaKnown RBP9.12□□□□□ -0.95
SNX9-203ENST00000614800 ERVK-7P63135 1459 aa9.12□□□□□ -0.95
SNX9-203ENST00000614800 SCAF11Q99590 1463 aaKnown RBP9.12□□□□□ -0.95
SNX9-203ENST00000614800 LRRC7Q96NW7 1537 aa9.11□□□□□ -0.95
SNX9-203ENST00000614800 FBXO31Q5XUX0 539 aaPredicted RBP9.11□□□□□ -0.95
SNX9-203ENST00000614800 ADGRF5Q8IZF2 1346 aa9.1□□□□□ -0.95
SNX9-203ENST00000614800 NRXN1Q9ULB1 1477 aa9.1□□□□□ -0.95
SNX9-203ENST00000614800 C11orf95C9JLR9 678 aaPredicted RBP9.1□□□□□ -0.95
SNX9-203ENST00000614800 HSPA1LP34931 641 aa9.1□□□□□ -0.95
SNX9-203ENST00000614800 C14orf93Q9H972 538 aaKnown RBP9.1□□□□□ -0.95
SNX9-203ENST00000614800 ZFYVE9O95405 1425 aa9.1□□□□□ -0.95
SNX9-203ENST00000614800 IFT172Q9UG01 1749 aa9.1□□□□□ -0.95
SNX9-203ENST00000614800 SLIT1O75093 1534 aa9.1□□□□□ -0.95
SNX9-203ENST00000614800 CFAP65Q6ZU64 1925 aaKnown RBP9.09□□□□□ -0.95
SNX9-203ENST00000614800 NWD1Q149M9 1564 aa9.09□□□□□ -0.95
SNX9-203ENST00000614800 CFAP70Q5T0N1 1121 aa9.09□□□□□ -0.95
SNX9-203ENST00000614800 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.09□□□□□ -0.95
SNX9-203ENST00000614800 PPLO60437 1756 aa9.09□□□□□ -0.95
SNX9-203ENST00000614800 SETBP1Q9Y6X0 1596 aa9.08□□□□□ -0.96
SNX9-203ENST00000614800 PIK3C2GO75747 1445 aa9.08□□□□□ -0.96
SNX9-203ENST00000614800 ROBO1Q9Y6N7 1651 aa9.08□□□□□ -0.96
SNX9-203ENST00000614800 YTHDC1Q96MU7 727 aaKnown RBP9.08□□□□□ -0.96
SNX9-203ENST00000614800 SCAF1Q9H7N4 1312 aaKnown RBP9.07□□□□□ -0.96
SNX9-203ENST00000614800 TOM1O60784 492 aa9.07□□□□□ -0.96
SNX9-203ENST00000614800 ARHGAP23Q9P227 1491 aa9.07□□□□□ -0.96
SNX9-203ENST00000614800 NEXMIFQ5QGS0 1516 aa9.06□□□□□ -0.96
SNX9-203ENST00000614800 TMEM131LA2VDJ0 1609 aa9.06□□□□□ -0.96
SNX9-203ENST00000614800 PIP4K2BP78356 416 aa9.06□□□□□ -0.96
SNX9-203ENST00000614800 TESK2Q96S53 571 aa9.06□□□□□ -0.96
SNX9-203ENST00000614800 KTN1Q86UP2 1357 aaKnown RBP9.05□□□□□ -0.96
SNX9-203ENST00000614800 CENPJQ9HC77 1338 aaPredicted RBP9.05□□□□□ -0.96
SNX9-203ENST00000614800 NUTM2DQ5VT03 806 aaPredicted RBP9.04□□□□□ -0.96
SNX9-203ENST00000614800 PRKRIP1Q9H875 184 aaPredicted RBP9.04□□□□□ -0.96
SNX9-203ENST00000614800 RIMS2Q9UQ26 1411 aa9.04□□□□□ -0.96
SNX9-203ENST00000614800 NKTRP30414 1462 aaKnown RBP9.03□□□□□ -0.96
SNX9-203ENST00000614800 PHLPP1O60346 1717 aa9.03□□□□□ -0.96
SNX9-203ENST00000614800 SBNO2Q9Y2G9 1366 aa9.03□□□□□ -0.96
SNX9-203ENST00000614800 TRAK1Q9UPV9 953 aa9.03□□□□□ -0.96
SNX9-203ENST00000614800 RALBP1Q15311 655 aa9.02□□□□□ -0.97
SNX9-203ENST00000614800 BCANQ96GW7 911 aa9.02□□□□□ -0.97
SNX9-203ENST00000614800 EID1Q9Y6B2 187 aa9.02□□□□□ -0.97
SNX9-203ENST00000614800 COL16A1Q07092 1604 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms