RNA–Protein interactions for RNA: ENST00000612355.1

PPARGC1A-216, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 5 BASIC

Gene PPARGC1A, Length 936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-216ENST00000612355 KANK1Q14678 1352 aa15.71■□□□□ 0.11
PPARGC1A-216ENST00000612355 SPATA31A6Q5VVP1 1343 aa15.7■□□□□ 0.1
PPARGC1A-216ENST00000612355 ZFYVE9O95405 1425 aa15.7■□□□□ 0.1
PPARGC1A-216ENST00000612355 NCOA3Q9Y6Q9 1424 aa15.7■□□□□ 0.1
PPARGC1A-216ENST00000612355 RBM33Q96EV2 1170 aaKnown RBP15.7■□□□□ 0.1
PPARGC1A-216ENST00000612355 PTPN23Q9H3S7 1636 aa15.69■□□□□ 0.1
PPARGC1A-216ENST00000612355 UPF1Q92900 1129 aaKnown RBP eCLIP15.69■□□□□ 0.1
PPARGC1A-216ENST00000612355 CDK12Q9NYV4 1490 aaPredicted RBP15.68■□□□□ 0.1
PPARGC1A-216ENST00000612355 PLEKHG1Q9ULL1 1385 aa15.68■□□□□ 0.1
PPARGC1A-216ENST00000612355 DAPK1P53355 1430 aa15.68■□□□□ 0.1
PPARGC1A-216ENST00000612355 RPRD2Q5VT52 1461 aaKnown RBP15.67■□□□□ 0.1
PPARGC1A-216ENST00000612355 GCC2Q8IWJ2 1684 aa15.67■□□□□ 0.1
PPARGC1A-216ENST00000612355 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.66■□□□□ 0.1
PPARGC1A-216ENST00000612355 KANK4Q5T7N3 995 aaPredicted RBP15.66■□□□□ 0.1
PPARGC1A-216ENST00000612355 ZNF772Q68DY9 489 aaPredicted RBP15.66■□□□□ 0.1
PPARGC1A-216ENST00000612355 DIP2AQ14689 1571 aa15.66■□□□□ 0.1
PPARGC1A-216ENST00000612355 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.65■□□□□ 0.17e-7■■□□□ 13.1
PPARGC1A-216ENST00000612355 RRP7BPQ9NSQ0 103 aa15.65■□□□□ 0.1
PPARGC1A-216ENST00000612355 SLC52A1Q9NWF4 448 aa15.65■□□□□ 0.1
PPARGC1A-216ENST00000612355 TMEM131LA2VDJ0 1609 aa15.65■□□□□ 0.1
PPARGC1A-216ENST00000612355 RIMS2Q9UQ26 1411 aa15.61■□□□□ 0.09
PPARGC1A-216ENST00000612355 ANKRD30AQ9BXX3 1397 aa15.61■□□□□ 0.09
PPARGC1A-216ENST00000612355 ADGRL2O95490 1459 aa15.6■□□□□ 0.09
PPARGC1A-216ENST00000612355 PIK3R4Q99570 1358 aa15.6■□□□□ 0.09
PPARGC1A-216ENST00000612355 ADAMTS13Q76LX8 1427 aa15.6■□□□□ 0.09
PPARGC1A-216ENST00000612355 NHSL1Q5SYE7 1610 aa15.59■□□□□ 0.09
PPARGC1A-216ENST00000612355 MEX3CQ5U5Q3 659 aaKnown RBP15.59■□□□□ 0.09
PPARGC1A-216ENST00000612355 TRIM52Q96A61 297 aa15.59■□□□□ 0.09
PPARGC1A-216ENST00000612355 TBX22Q9Y458 520 aa15.59■□□□□ 0.09
PPARGC1A-216ENST00000612355 CADPS2Q86UW7 1296 aa15.58■□□□□ 0.08
PPARGC1A-216ENST00000612355 DCCP43146 1447 aa15.58■□□□□ 0.08
PPARGC1A-216ENST00000612355 RXRBP28702 533 aa15.57■□□□□ 0.08
PPARGC1A-216ENST00000612355 BCANQ96GW7 911 aa15.56■□□□□ 0.08
PPARGC1A-216ENST00000612355 C19orf44Q9H6X5 657 aa15.56■□□□□ 0.08
PPARGC1A-216ENST00000612355 TRPM2O94759 1503 aa15.55■□□□□ 0.08
PPARGC1A-216ENST00000612355 ASXL1Q8IXJ9 1541 aa15.55■□□□□ 0.08
PPARGC1A-216ENST00000612355 SETD5Q9C0A6 1442 aa15.55■□□□□ 0.08
PPARGC1A-216ENST00000612355 XRN1Q8IZH2 1706 aaKnown RBP15.54■□□□□ 0.08
PPARGC1A-216ENST00000612355 RGS12O14924 1447 aa15.54■□□□□ 0.08
PPARGC1A-216ENST00000612355 PPP1R15AO75807 674 aaPredicted RBP15.54■□□□□ 0.08
PPARGC1A-216ENST00000612355 HDGFP51858 240 aaKnown RBP15.54■□□□□ 0.08
PPARGC1A-216ENST00000612355 UNC13BO14795 1591 aa15.53■□□□□ 0.08
PPARGC1A-216ENST00000612355 BRINP3Q76B58 766 aa15.53■□□□□ 0.08
PPARGC1A-216ENST00000612355 E9PCH4 1651 aa15.52■□□□□ 0.08
PPARGC1A-216ENST00000612355 ATF3P18847 181 aa15.52■□□□□ 0.08
PPARGC1A-216ENST00000612355 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.52■□□□□ 0.08
PPARGC1A-216ENST00000612355 EP400Q96L91 3159 aa15.52■□□□□ 0.07
PPARGC1A-216ENST00000612355 AFF2P51816 1311 aa15.51■□□□□ 0.07
PPARGC1A-216ENST00000612355 C14orf37Q86TY3 774 aa15.51■□□□□ 0.07
PPARGC1A-216ENST00000612355 ANKRD50Q9ULJ7 1429 aa15.51■□□□□ 0.07
PPARGC1A-216ENST00000612355 NRXN3Q9Y4C0 1643 aa15.5■□□□□ 0.07
PPARGC1A-216ENST00000612355 CHIC2Q9UKJ5 165 aa15.5■□□□□ 0.07
PPARGC1A-216ENST00000612355 MST1RQ04912 1400 aa15.5■□□□□ 0.07
PPARGC1A-216ENST00000612355 PTPRUQ92729 1446 aa15.5■□□□□ 0.07
PPARGC1A-216ENST00000612355 LAMC1P11047 1609 aa15.48■□□□□ 0.07
PPARGC1A-216ENST00000612355 SETBP1Q9Y6X0 1596 aa15.48■□□□□ 0.07
PPARGC1A-216ENST00000612355 IQGAP3Q86VI3 1631 aa15.47■□□□□ 0.07
PPARGC1A-216ENST00000612355 NUTM2BA6NNL0 878 aaPredicted RBP15.46■□□□□ 0.07
PPARGC1A-216ENST00000612355 NUTM2EB1AL46 878 aaPredicted RBP15.46■□□□□ 0.07
PPARGC1A-216ENST00000612355 RBM6P78332 1123 aaKnown RBP15.46■□□□□ 0.07
PPARGC1A-216ENST00000612355 NUTM2AQ8IVF1 878 aaPredicted RBP15.46■□□□□ 0.07
PPARGC1A-216ENST00000612355 PNPLA6Q8IY17 1366 aa15.46■□□□□ 0.07
PPARGC1A-216ENST00000612355 AMOTL2Q9Y2J4 779 aa15.45■□□□□ 0.06
PPARGC1A-216ENST00000612355 NALCNQ8IZF0 1738 aa15.44■□□□□ 0.06
PPARGC1A-216ENST00000612355 LRRC59Q96AG4 307 aaKnown RBP15.43■□□□□ 0.06
PPARGC1A-216ENST00000612355 ADGRL3Q9HAR2 1447 aa15.43■□□□□ 0.06
PPARGC1A-216ENST00000612355 QTRT2Q9H974 415 aaKnown RBP15.42■□□□□ 0.06
PPARGC1A-216ENST00000612355 ATAD2Q6PL18 1390 aa15.41■□□□□ 0.06
PPARGC1A-216ENST00000612355 NUTM2DQ5VT03 806 aaPredicted RBP15.41■□□□□ 0.06
PPARGC1A-216ENST00000612355 C8orf37Q96NL8 207 aa15.41■□□□□ 0.06
PPARGC1A-216ENST00000612355 CHGAP10645 457 aaKnown RBP15.39■□□□□ 0.05
PPARGC1A-216ENST00000612355 COL22A1Q8NFW1 1626 aaPredicted RBP15.39■□□□□ 0.05
PPARGC1A-216ENST00000612355 SPHKAPQ2M3C7 1700 aa15.38■□□□□ 0.05
PPARGC1A-216ENST00000612355 NGLY1Q96IV0 654 aa15.38■□□□□ 0.05
PPARGC1A-216ENST00000612355 APLP2Q06481 763 aa15.37■□□□□ 0.05
PPARGC1A-216ENST00000612355 METP08581 1390 aa15.36■□□□□ 0.05
PPARGC1A-216ENST00000612355 PTCH1Q13635 1447 aa15.36■□□□□ 0.05
PPARGC1A-216ENST00000612355 ATRNO75882 1429 aa15.35■□□□□ 0.05
PPARGC1A-216ENST00000612355 C1orf167Q5SNV9 1468 aa15.35■□□□□ 0.05
PPARGC1A-216ENST00000612355 LOC105371045A0A1W2PR82 267 aa15.35■□□□□ 0.05
PPARGC1A-216ENST00000612355 ROCK1Q13464 1354 aa15.35■□□□□ 0.05
PPARGC1A-216ENST00000612355 MARF1Q9Y4F3 1742 aaKnown RBP15.34■□□□□ 0.05
PPARGC1A-216ENST00000612355 DDX17Q92841 729 aaKnown RBP15.34■□□□□ 0.05
PPARGC1A-216ENST00000612355 NEXMIFQ5QGS0 1516 aa15.33■□□□□ 0.05
PPARGC1A-216ENST00000612355 FOXD1Q16676 465 aa15.33■□□□□ 0.04
PPARGC1A-216ENST00000612355 SOS2Q07890 1332 aaPredicted RBP15.33■□□□□ 0.04
PPARGC1A-216ENST00000612355 PRAG1Q86YV5 1406 aa15.33■□□□□ 0.04
PPARGC1A-216ENST00000612355 FNBP4Q8N3X1 1017 aaPredicted RBP15.32■□□□□ 0.04
PPARGC1A-216ENST00000612355 ZRANB1Q9UGI0 708 aa15.32■□□□□ 0.04
PPARGC1A-216ENST00000612355 TRPC5Q9UL62 973 aaPredicted RBP15.32■□□□□ 0.04
PPARGC1A-216ENST00000612355 FAM50AQ14320 339 aaKnown RBP15.31■□□□□ 0.04
PPARGC1A-216ENST00000612355 MYOM2P54296 1465 aa15.31■□□□□ 0.04
PPARGC1A-216ENST00000612355 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.31■□□□□ 0.04
PPARGC1A-216ENST00000612355 ADAMTS2O95450 1211 aa15.3■□□□□ 0.04
PPARGC1A-216ENST00000612355 USP21Q9UK80 565 aa15.3■□□□□ 0.04
PPARGC1A-216ENST00000612355 CCDC125Q86Z20 511 aa15.29■□□□□ 0.04
PPARGC1A-216ENST00000612355 CLTCL1P53675 1640 aa15.28■□□□□ 0.04
PPARGC1A-216ENST00000612355 NUP155O75694 1391 aa15.28■□□□□ 0.04
PPARGC1A-216ENST00000612355 BCL9LQ86UU0 1499 aa15.27■□□□□ 0.04
PPARGC1A-216ENST00000612355 LRP5O75197 1615 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 155.2 ms