RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 VGFO15240 615 aaPredicted RBP11.73□□□□□ -0.53
SRGAP2B-204ENST00000612199 MFAP1P55081 439 aaKnown RBP11.73□□□□□ -0.53
SRGAP2B-204ENST00000612199 MYOM3Q5VTT5 1437 aa11.72□□□□□ -0.53
SRGAP2B-204ENST00000612199 PRDM2Q13029 1718 aa11.72□□□□□ -0.53
SRGAP2B-204ENST00000612199 DEKP35659 375 aaKnown RBP11.72□□□□□ -0.53
SRGAP2B-204ENST00000612199 EVA1CP58658 441 aa11.72□□□□□ -0.53
SRGAP2B-204ENST00000612199 SYTL4Q96C24 671 aaPredicted RBP11.72□□□□□ -0.53
SRGAP2B-204ENST00000612199 APAF1O14727 1248 aa11.72□□□□□ -0.53
SRGAP2B-204ENST00000612199 AFAP1Q8N556 730 aa11.72□□□□□ -0.53
SRGAP2B-204ENST00000612199 LRRC9Q6ZRR7 1453 aa11.71□□□□□ -0.54
SRGAP2B-204ENST00000612199 GBP4Q96PP9 640 aa11.71□□□□□ -0.54
SRGAP2B-204ENST00000612199 ARAP1Q96P48 1450 aa11.7□□□□□ -0.54
SRGAP2B-204ENST00000612199 GZF1Q9H116 711 aaPredicted RBP11.7□□□□□ -0.54
SRGAP2B-204ENST00000612199 FAM69CQ0P6D2 419 aa11.7□□□□□ -0.54
SRGAP2B-204ENST00000612199 ODF2Q5BJF6 829 aa11.7□□□□□ -0.54
SRGAP2B-204ENST00000612199 IPO9Q96P70 1041 aaKnown RBP11.7□□□□□ -0.54
SRGAP2B-204ENST00000612199 HDAC5Q9UQL6 1122 aa11.7□□□□□ -0.54
SRGAP2B-204ENST00000612199 SYNJ1O43426 1573 aa11.7□□□□□ -0.54
SRGAP2B-204ENST00000612199 LMOD3Q0VAK6 560 aa11.7□□□□□ -0.54
SRGAP2B-204ENST00000612199 KIAA1211Q6ZU35 1233 aa11.7□□□□□ -0.54
SRGAP2B-204ENST00000612199 BCCIPQ9P287 314 aaKnown RBP eCLIP11.69□□□□□ -0.54
SRGAP2B-204ENST00000612199 EVC2Q86UK5 1308 aa11.69□□□□□ -0.54
SRGAP2B-204ENST00000612199 DHX16O60231 1041 aaKnown RBP11.69□□□□□ -0.54
SRGAP2B-204ENST00000612199 EXOC6Q8TAG9 804 aa11.69□□□□□ -0.54
SRGAP2B-204ENST00000612199 TRIM6-TRIM34B2RNG4 842 aa11.69□□□□□ -0.54
SRGAP2B-204ENST00000612199 CGNL1Q0VF96 1302 aa11.69□□□□□ -0.54
SRGAP2B-204ENST00000612199 TMEM132EQ6IEE7 984 aa11.69□□□□□ -0.54
SRGAP2B-204ENST00000612199 HMMRO75330 724 aa11.68□□□□□ -0.54
SRGAP2B-204ENST00000612199 ZBED9Q6R2W3 1325 aa11.68□□□□□ -0.54
SRGAP2B-204ENST00000612199 KIF7Q2M1P5 1343 aa11.68□□□□□ -0.54
SRGAP2B-204ENST00000612199 COG3Q96JB2 828 aa11.68□□□□□ -0.54
SRGAP2B-204ENST00000612199 GOLGA6L1Q8N7Z2 621 aa11.68□□□□□ -0.54
SRGAP2B-204ENST00000612199 NCOA2Q15596 1464 aa11.68□□□□□ -0.54
SRGAP2B-204ENST00000612199 NOL8Q76FK4 1167 aaKnown RBP11.67□□□□□ -0.54
SRGAP2B-204ENST00000612199 NGEFQ8N5V2 710 aa11.67□□□□□ -0.54
SRGAP2B-204ENST00000612199 COG6Q9Y2V7 657 aa11.67□□□□□ -0.54
SRGAP2B-204ENST00000612199 UACAQ9BZF9 1416 aa11.67□□□□□ -0.54
SRGAP2B-204ENST00000612199 ANKRD50Q9ULJ7 1429 aa11.66□□□□□ -0.54
SRGAP2B-204ENST00000612199 TPM4P67936 248 aa11.66□□□□□ -0.54
SRGAP2B-204ENST00000612199 SEPT11Q9NVA2 429 aaKnown RBP11.66□□□□□ -0.54
SRGAP2B-204ENST00000612199 WDR78Q5VTH9 848 aa11.66□□□□□ -0.54
SRGAP2B-204ENST00000612199 CRBNQ96SW2 442 aa11.66□□□□□ -0.54
SRGAP2B-204ENST00000612199 MSNP26038 577 aaKnown RBP11.65□□□□□ -0.54
SRGAP2B-204ENST00000612199 CCAR2Q8N163 923 aaKnown RBP11.65□□□□□ -0.54
SRGAP2B-204ENST00000612199 CFTRP13569 1480 aa11.65□□□□□ -0.55
SRGAP2B-204ENST00000612199 NECTIN2Q92692 538 aa11.64□□□□□ -0.55
SRGAP2B-204ENST00000612199 TTC16Q8NEE8 873 aa11.64□□□□□ -0.55
SRGAP2B-204ENST00000612199 PSMD1Q99460 953 aa11.64□□□□□ -0.55
SRGAP2B-204ENST00000612199 TPD52L1Q16890 204 aaPredicted RBP11.64□□□□□ -0.55
SRGAP2B-204ENST00000612199 RRP1P56182 461 aaKnown RBP11.64□□□□□ -0.55
SRGAP2B-204ENST00000612199 CASKIN1Q8WXD9 1431 aa11.64□□□□□ -0.55
SRGAP2B-204ENST00000612199 E9PSI1 815 aa11.64□□□□□ -0.55
SRGAP2B-204ENST00000612199 CCDC7Q96M83 1385 aa11.63□□□□□ -0.55
SRGAP2B-204ENST00000612199 KCNA4P22459 653 aa11.63□□□□□ -0.55
SRGAP2B-204ENST00000612199 CENPQQ7L2Z9 268 aaPredicted RBP11.63□□□□□ -0.55
SRGAP2B-204ENST00000612199 WASHC2AQ641Q2 1341 aa11.63□□□□□ -0.55
SRGAP2B-204ENST00000612199 CT47A1Q5JQC4 288 aaPredicted RBP11.63□□□□□ -0.55
SRGAP2B-204ENST00000612199 NOL10Q9BSC4 688 aaKnown RBP11.63□□□□□ -0.55
SRGAP2B-204ENST00000612199 GGNBP2Q9H3C7 697 aa11.63□□□□□ -0.55
SRGAP2B-204ENST00000612199 CABP2Q9NPB3 220 aa11.62□□□□□ -0.55
SRGAP2B-204ENST00000612199 ZMYND15Q9H091 742 aa11.62□□□□□ -0.55
SRGAP2B-204ENST00000612199 CFAP70Q5T0N1 1121 aa11.62□□□□□ -0.55
SRGAP2B-204ENST00000612199 MTMR7Q9Y216 660 aa11.62□□□□□ -0.55
SRGAP2B-204ENST00000612199 RFX1P22670 979 aa11.62□□□□□ -0.55
SRGAP2B-204ENST00000612199 CUX1P39880 1505 aa11.61□□□□□ -0.55
SRGAP2B-204ENST00000612199 GRIN2BQ13224 1484 aa11.61□□□□□ -0.55
SRGAP2B-204ENST00000612199 HMOX1P09601 288 aa11.61□□□□□ -0.55
SRGAP2B-204ENST00000612199 PCMTD1Q96MG8 357 aaPredicted RBP11.61□□□□□ -0.55
SRGAP2B-204ENST00000612199 NBPF1Q3BBV0 1214 aa11.61□□□□□ -0.55
SRGAP2B-204ENST00000612199 ANKRD45Q5TZF3 282 aa11.61□□□□□ -0.55
SRGAP2B-204ENST00000612199 EIF2S2P20042 333 aaKnown RBP11.61□□□□□ -0.55
SRGAP2B-204ENST00000612199 HTATSF1O43719 755 aaKnown RBP11.61□□□□□ -0.55
SRGAP2B-204ENST00000612199 DIAPH1O60610 1272 aaKnown RBP11.61□□□□□ -0.55
SRGAP2B-204ENST00000612199 RIPK4P57078 832 aa11.61□□□□□ -0.55
SRGAP2B-204ENST00000612199 IKQ13123 557 aaPredicted RBP11.6□□□□□ -0.55
SRGAP2B-204ENST00000612199 DHX37Q8IY37 1157 aaKnown RBP11.6□□□□□ -0.55
SRGAP2B-204ENST00000612199 NUTM2GQ5VZR2 741 aa11.6□□□□□ -0.55
SRGAP2B-204ENST00000612199 SYAP1Q96A49 352 aaPredicted RBP11.6□□□□□ -0.55
SRGAP2B-204ENST00000612199 ZKSCAN2Q63HK3 967 aa11.6□□□□□ -0.55
SRGAP2B-204ENST00000612199 PLCD4Q9BRC7 762 aa11.6□□□□□ -0.55
SRGAP2B-204ENST00000612199 PRG4Q92954 1404 aaPredicted RBP11.6□□□□□ -0.55
SRGAP2B-204ENST00000612199 USP35Q9P2H5 1018 aa11.6□□□□□ -0.55
SRGAP2B-204ENST00000612199 FOXD4L5Q5VV16 416 aaPredicted RBP11.59□□□□□ -0.55
SRGAP2B-204ENST00000612199 HOMER1Q86YM7 354 aa11.59□□□□□ -0.55
SRGAP2B-204ENST00000612199 FOXD4L4Q8WXT5 416 aaPredicted RBP11.59□□□□□ -0.55
SRGAP2B-204ENST00000612199 DNAJC5BQ9UF47 199 aa11.59□□□□□ -0.55
SRGAP2B-204ENST00000612199 FYCO1Q9BQS8 1478 aa11.59□□□□□ -0.55
SRGAP2B-204ENST00000612199 TEFQ10587 303 aa11.59□□□□□ -0.55
SRGAP2B-204ENST00000612199 PDE4AP27815 886 aa11.58□□□□□ -0.56
SRGAP2B-204ENST00000612199 SETQ01105 290 aaPredicted RBP11.58□□□□□ -0.56
SRGAP2B-204ENST00000612199 ARHGAP5Q13017 1502 aa11.58□□□□□ -0.56
SRGAP2B-204ENST00000612199 FAM161AQ3B820 660 aa11.58□□□□□ -0.56
SRGAP2B-204ENST00000612199 GPATCH3Q96I76 525 aa11.58□□□□□ -0.56
SRGAP2B-204ENST00000612199 HMGN5P82970 282 aaKnown RBP11.58□□□□□ -0.56
SRGAP2B-204ENST00000612199 RILPL2Q969X0 211 aa11.58□□□□□ -0.56
SRGAP2B-204ENST00000612199 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.57□□□□□ -0.56
SRGAP2B-204ENST00000612199 PSME1Q06323 249 aa11.57□□□□□ -0.56
SRGAP2B-204ENST00000612199 C1orf141Q5JVX7 400 aa11.57□□□□□ -0.56
SRGAP2B-204ENST00000612199 VPS37DQ86XT2 251 aa11.57□□□□□ -0.56
SRGAP2B-204ENST00000612199 UQCRHLA0A096LP55 91 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms