RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 ARHGAP5Q13017 1502 aa8.72□□□□□ -1.01
SYNPO2-206ENST00000610556 DISP3Q9P2K9 1392 aa8.72□□□□□ -1.01
SYNPO2-206ENST00000610556 MLECQ14165 292 aa8.72□□□□□ -1.01
SYNPO2-206ENST00000610556 SYNJ2O15056 1496 aa8.72□□□□□ -1.01
SYNPO2-206ENST00000610556 FOXD4L1Q9NU39 408 aa8.72□□□□□ -1.01
SYNPO2-206ENST00000610556 TCP11L2Q8N4U5 519 aa8.71□□□□□ -1.01
SYNPO2-206ENST00000610556 TRIM44Q96DX7 344 aaPredicted RBP8.71□□□□□ -1.01
SYNPO2-206ENST00000610556 GRIN2AQ12879 1464 aa8.71□□□□□ -1.02
SYNPO2-206ENST00000610556 MTHFSP49914 203 aa8.71□□□□□ -1.02
SYNPO2-206ENST00000610556 TPRNQ4KMQ1 711 aa8.71□□□□□ -1.02
SYNPO2-206ENST00000610556 MAGI1Q96QZ7 1491 aaPredicted RBP8.71□□□□□ -1.02
SYNPO2-206ENST00000610556 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.7□□□□□ -1.02
SYNPO2-206ENST00000610556 NAP1L5Q96NT1 182 aaPredicted RBP8.7□□□□□ -1.02
SYNPO2-206ENST00000610556 KDM6BO15054 1643 aa8.7□□□□□ -1.02
SYNPO2-206ENST00000610556 TEX14Q8IWB6 1497 aa8.7□□□□□ -1.02
SYNPO2-206ENST00000610556 PZPP20742 1482 aa8.69□□□□□ -1.02
SYNPO2-206ENST00000610556 SLFN5Q08AF3 891 aa8.69□□□□□ -1.02
SYNPO2-206ENST00000610556 DUSP27Q5VZP5 1158 aa8.69□□□□□ -1.02
SYNPO2-206ENST00000610556 RUNDC1Q96C34 613 aa8.69□□□□□ -1.02
SYNPO2-206ENST00000610556 NUP160Q12769 1436 aa8.69□□□□□ -1.02
SYNPO2-206ENST00000610556 MINK1Q8N4C8 1332 aaPredicted RBP8.69□□□□□ -1.02
SYNPO2-206ENST00000610556 IPO8O15397 1037 aaKnown RBP8.69□□□□□ -1.02
SYNPO2-206ENST00000610556 ZKSCAN2Q63HK3 967 aa8.69□□□□□ -1.02
SYNPO2-206ENST00000610556 GGNBP2Q9H3C7 697 aa8.69□□□□□ -1.02
SYNPO2-206ENST00000610556 GOLGA6L22H0YM25 854 aa8.68□□□□□ -1.02
SYNPO2-206ENST00000610556 CABP2Q9NPB3 220 aa8.68□□□□□ -1.02
SYNPO2-206ENST00000610556 SPATA31E1Q6ZUB1 1445 aa8.68□□□□□ -1.02
SYNPO2-206ENST00000610556 PER1O15534 1290 aaPredicted RBP8.68□□□□□ -1.02
SYNPO2-206ENST00000610556 HDGFL2Q7Z4V5 671 aaPredicted RBP8.68□□□□□ -1.02
SYNPO2-206ENST00000610556 ANO8Q9HCE9 1232 aaPredicted RBP8.68□□□□□ -1.02
SYNPO2-206ENST00000610556 TSR2Q969E8 191 aaKnown RBP8.67□□□□□ -1.02
SYNPO2-206ENST00000610556 TESK2Q96S53 571 aa8.67□□□□□ -1.02
SYNPO2-206ENST00000610556 L1TD1Q5T7N2 865 aaKnown RBP8.67□□□□□ -1.02
SYNPO2-206ENST00000610556 DZIP1LQ8IYY4 767 aaKnown RBP8.67□□□□□ -1.02
SYNPO2-206ENST00000610556 PLEKHH2Q8IVE3 1493 aa8.67□□□□□ -1.02
SYNPO2-206ENST00000610556 ZBTB7CA1YPR0 619 aa8.66□□□□□ -1.02
SYNPO2-206ENST00000610556 CCDC141Q6ZP82 1450 aa8.66□□□□□ -1.02
SYNPO2-206ENST00000610556 PDZRN3Q9UPQ7 1066 aa8.66□□□□□ -1.02
SYNPO2-206ENST00000610556 C14orf37Q86TY3 774 aa8.66□□□□□ -1.02
SYNPO2-206ENST00000610556 PNNQ9H307 717 aaKnown RBP8.66□□□□□ -1.02
SYNPO2-206ENST00000610556 TERF2IPQ9NYB0 399 aa8.66□□□□□ -1.02
SYNPO2-206ENST00000610556 RALGAPBQ86X10 1494 aa8.66□□□□□ -1.02
SYNPO2-206ENST00000610556 DISP1Q96F81 1524 aa8.65□□□□□ -1.02
SYNPO2-206ENST00000610556 EVC2Q86UK5 1308 aa8.65□□□□□ -1.02
SYNPO2-206ENST00000610556 NUTM2FA1L443 756 aa8.65□□□□□ -1.02
SYNPO2-206ENST00000610556 RIPK4P57078 832 aa8.65□□□□□ -1.02
SYNPO2-206ENST00000610556 WWC1Q8IX03 1113 aa8.65□□□□□ -1.02
SYNPO2-206ENST00000610556 LNPKQ9C0E8 428 aa8.65□□□□□ -1.02
SYNPO2-206ENST00000610556 PARD3Q8TEW0 1356 aa8.65□□□□□ -1.03
SYNPO2-206ENST00000610556 GOLGA6L3A6NEY3 463 aa8.65□□□□□ -1.03
SYNPO2-206ENST00000610556 ANKRD45Q5TZF3 282 aa8.65□□□□□ -1.03
SYNPO2-206ENST00000610556 RNF123Q5XPI4 1314 aa8.65□□□□□ -1.03
SYNPO2-206ENST00000610556 ATP10BO94823 1461 aa8.65□□□□□ -1.03
SYNPO2-206ENST00000610556 SCAPERQ9BY12 1400 aa8.64□□□□□ -1.03
SYNPO2-206ENST00000610556 PDE3AQ14432 1141 aa8.64□□□□□ -1.03
SYNPO2-206ENST00000610556 AMER1Q5JTC6 1135 aaPredicted RBP8.64□□□□□ -1.03
SYNPO2-206ENST00000610556 VGFO15240 615 aaPredicted RBP8.63□□□□□ -1.03
SYNPO2-206ENST00000610556 IGHDP01880 384 aa8.63□□□□□ -1.03
SYNPO2-206ENST00000610556 EXOSC9Q06265 439 aaKnown RBP8.63□□□□□ -1.03
SYNPO2-206ENST00000610556 ADGRF5Q8IZF2 1346 aa8.63□□□□□ -1.03
SYNPO2-206ENST00000610556 NGEFQ8N5V2 710 aa8.63□□□□□ -1.03
SYNPO2-206ENST00000610556 STAC3Q96MF2 364 aa8.63□□□□□ -1.03
SYNPO2-206ENST00000610556 LRPPRCP42704 1394 aaKnown RBP8.63□□□□□ -1.03
SYNPO2-206ENST00000610556 HMOX1P09601 288 aa8.63□□□□□ -1.03
SYNPO2-206ENST00000610556 KIAA0556O60303 1618 aa8.63□□□□□ -1.03
SYNPO2-206ENST00000610556 RAPGEF6Q8TEU7 1601 aa8.63□□□□□ -1.03
SYNPO2-206ENST00000610556 PRAG1Q86YV5 1406 aa8.63□□□□□ -1.03
SYNPO2-206ENST00000610556 DENND4BO75064 1496 aaPredicted RBP8.63□□□□□ -1.03
SYNPO2-206ENST00000610556 SPINK5Q9NQ38 1064 aaPredicted RBP8.62□□□□□ -1.03
SYNPO2-206ENST00000610556 PLEKHH1Q9ULM0 1364 aa8.62□□□□□ -1.03
SYNPO2-206ENST00000610556 CHMP4BQ9H444 224 aaKnown RBP8.62□□□□□ -1.03
SYNPO2-206ENST00000610556 CASC1Q6TDU7 716 aa8.62□□□□□ -1.03
SYNPO2-206ENST00000610556 C22orf23Q9BZE7 217 aa8.62□□□□□ -1.03
SYNPO2-206ENST00000610556 DDX19BQ9UMR2 479 aa8.61□□□□□ -1.03
SYNPO2-206ENST00000610556 DIAPH1O60610 1272 aaKnown RBP8.61□□□□□ -1.03
SYNPO2-206ENST00000610556 ERCC6L2Q5T890 1561 aa8.61□□□□□ -1.03
SYNPO2-206ENST00000610556 GBP4Q96PP9 640 aa8.61□□□□□ -1.03
SYNPO2-206ENST00000610556 KIF14Q15058 1648 aa8.6□□□□□ -1.03
SYNPO2-206ENST00000610556 DNMT1P26358 1616 aaKnown RBP8.6□□□□□ -1.03
SYNPO2-206ENST00000610556 RARSP54136 660 aaKnown RBP8.6□□□□□ -1.03
SYNPO2-206ENST00000610556 SLC4A10Q6U841 1118 aa8.6□□□□□ -1.03
SYNPO2-206ENST00000610556 FOXD4L5Q5VV16 416 aaPredicted RBP8.6□□□□□ -1.03
SYNPO2-206ENST00000610556 FOXD4L4Q8WXT5 416 aaPredicted RBP8.6□□□□□ -1.03
SYNPO2-206ENST00000610556 C1orf115Q9H7X2 142 aa8.6□□□□□ -1.03
SYNPO2-206ENST00000610556 TNNQ9UQP3 1299 aa8.6□□□□□ -1.03
SYNPO2-206ENST00000610556 GLIPR1L2Q4G1C9 344 aa8.59□□□□□ -1.03
SYNPO2-206ENST00000610556 NOB1Q9ULX3 412 aaKnown RBP8.59□□□□□ -1.03
SYNPO2-206ENST00000610556 NSD3Q9BZ95 1437 aa8.59□□□□□ -1.03
SYNPO2-206ENST00000610556 C8orf34Q49A92 452 aa8.59□□□□□ -1.04
SYNPO2-206ENST00000610556 NOL8Q76FK4 1167 aaKnown RBP8.59□□□□□ -1.04
SYNPO2-206ENST00000610556 CHMP5Q9NZZ3 219 aa8.58□□□□□ -1.04
SYNPO2-206ENST00000610556 DMRT2Q9Y5R5 561 aa8.58□□□□□ -1.04
SYNPO2-206ENST00000610556 UHRF1BP1Q6BDS2 1440 aa8.58□□□□□ -1.04
SYNPO2-206ENST00000610556 PTMAP06454 111 aaKnown RBP8.58□□□□□ -1.04
SYNPO2-206ENST00000610556 FAM135AQ9P2D6 1515 aa8.58□□□□□ -1.04
SYNPO2-206ENST00000610556 KDM5BQ9UGL1 1544 aa8.58□□□□□ -1.04
SYNPO2-206ENST00000610556 CALD1Q05682 793 aaKnown RBP8.58□□□□□ -1.04
SYNPO2-206ENST00000610556 NKTRP30414 1462 aaKnown RBP8.57□□□□□ -1.04
SYNPO2-206ENST00000610556 PLCB2Q00722 1185 aa8.57□□□□□ -1.04
SYNPO2-206ENST00000610556 MVPQ14764 893 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms