RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 EYA1Q99502 592 aa8.61□□□□□ -1.03
RNU6-88P-201ENST00000606801 ANKK1Q8NFD2 765 aa8.6□□□□□ -1.03
RNU6-88P-201ENST00000606801 OATP04181 439 aa8.59□□□□□ -1.03
RNU6-88P-201ENST00000606801 TMEM132AQ24JP5 1023 aa8.59□□□□□ -1.03
RNU6-88P-201ENST00000606801 SOWAHBA6NEL2 793 aa8.58□□□□□ -1.04
RNU6-88P-201ENST00000606801 PTPN5P54829 565 aa8.58□□□□□ -1.04
RNU6-88P-201ENST00000606801 MS4A1P11836 297 aa8.57□□□□□ -1.04
RNU6-88P-201ENST00000606801 MDM2Q00987 491 aaPredicted RBP8.57□□□□□ -1.04
RNU6-88P-201ENST00000606801 FAM117AQ9C073 453 aa8.57□□□□□ -1.04
RNU6-88P-201ENST00000606801 BCAMP50895 628 aa8.56□□□□□ -1.04
RNU6-88P-201ENST00000606801 GIGYF2Q6Y7W6 1299 aaKnown RBP8.56□□□□□ -1.04
RNU6-88P-201ENST00000606801 RCCD1A6NED2 376 aa8.55□□□□□ -1.04
RNU6-88P-201ENST00000606801 IL27Q8NEV9 243 aa8.55□□□□□ -1.04
RNU6-88P-201ENST00000606801 RBM46Q8TBY0 533 aaKnown RBP8.55□□□□□ -1.04
RNU6-88P-201ENST00000606801 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.55□□□□□ -1.04
RNU6-88P-201ENST00000606801 PLEKHG3A1L390 1219 aa8.54□□□□□ -1.04
RNU6-88P-201ENST00000606801 TTLL12Q14166 644 aaPredicted RBP8.54□□□□□ -1.04
RNU6-88P-201ENST00000606801 SAMD7Q7Z3H4 446 aa8.54□□□□□ -1.04
RNU6-88P-201ENST00000606801 LRCH3Q96II8 777 aa8.54□□□□□ -1.04
RNU6-88P-201ENST00000606801 GPCPD1Q9NPB8 672 aa8.54□□□□□ -1.04
RNU6-88P-201ENST00000606801 CLCN1P35523 988 aa8.53□□□□□ -1.04
RNU6-88P-201ENST00000606801 SSTR3P32745 418 aaPredicted RBP8.52□□□□□ -1.05
RNU6-88P-201ENST00000606801 FAM217BQ9NTX9 383 aaPredicted RBP8.52□□□□□ -1.05
RNU6-88P-201ENST00000606801 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.51□□□□□ -1.05
RNU6-88P-201ENST00000606801 HDGFP51858 240 aaKnown RBP8.51□□□□□ -1.05
RNU6-88P-201ENST00000606801 TSR3Q9UJK0 312 aaKnown RBP8.51□□□□□ -1.05
RNU6-88P-201ENST00000606801 SWT1Q5T5J6 900 aaKnown RBP8.5□□□□□ -1.05
RNU6-88P-201ENST00000606801 WBP1LQ9NX94 342 aa8.5□□□□□ -1.05
RNU6-88P-201ENST00000606801 HPS5Q9UPZ3 1129 aa8.5□□□□□ -1.05
RNU6-88P-201ENST00000606801 DNAJB2P25686 324 aa8.49□□□□□ -1.05
RNU6-88P-201ENST00000606801 NYAP1Q6ZVC0 841 aa8.49□□□□□ -1.05
RNU6-88P-201ENST00000606801 TMEM134Q9H6X4 195 aa8.49□□□□□ -1.05
RNU6-88P-201ENST00000606801 DAXXQ9UER7 740 aaPredicted RBP8.49□□□□□ -1.05
RNU6-88P-201ENST00000606801 PPP4CP60510 307 aa8.48□□□□□ -1.05
RNU6-88P-201ENST00000606801 SLF2Q8IX21 1173 aa8.46□□□□□ -1.06
RNU6-88P-201ENST00000606801 DDRGK1Q96HY6 314 aa8.46□□□□□ -1.06
RNU6-88P-201ENST00000606801 PLA2G2EQ9NZK7 142 aa8.46□□□□□ -1.06
RNU6-88P-201ENST00000606801 BEGAINQ9BUH8 593 aa8.45□□□□□ -1.06
RNU6-88P-201ENST00000606801 RNF40O75150 1001 aa8.44□□□□□ -1.06
RNU6-88P-201ENST00000606801 CD46P15529 392 aa8.44□□□□□ -1.06
RNU6-88P-201ENST00000606801 SLC4A3P48751 1232 aa8.43□□□□□ -1.06
RNU6-88P-201ENST00000606801 NECTIN2Q92692 538 aa8.43□□□□□ -1.06
RNU6-88P-201ENST00000606801 GTF3C3Q9Y5Q9 886 aa8.43□□□□□ -1.06
RNU6-88P-201ENST00000606801 SLC10A3P09131 477 aa8.42□□□□□ -1.06
RNU6-88P-201ENST00000606801 DDX11L8A8MPP1 907 aa8.41□□□□□ -1.06
RNU6-88P-201ENST00000606801 ITGBL1O95965 494 aaPredicted RBP8.4□□□□□ -1.06
RNU6-88P-201ENST00000606801 APLP1P51693 650 aa8.4□□□□□ -1.06
RNU6-88P-201ENST00000606801 IFFO2Q5TF58 517 aa8.4□□□□□ -1.06
RNU6-88P-201ENST00000606801 GOPCQ9HD26 462 aa8.39□□□□□ -1.07
RNU6-88P-201ENST00000606801 SULF1Q8IWU6 871 aa8.38□□□□□ -1.07
RNU6-88P-201ENST00000606801 SPIRE2Q8WWL2 714 aa8.38□□□□□ -1.07
RNU6-88P-201ENST00000606801 SH3D19Q5HYK7 790 aa8.37□□□□□ -1.07
RNU6-88P-201ENST00000606801 MYSM1Q5VVJ2 828 aa8.37□□□□□ -1.07
RNU6-88P-201ENST00000606801 TBC1D2Q9BYX2 928 aa8.37□□□□□ -1.07
RNU6-88P-201ENST00000606801 TJAP1Q5JTD0 557 aa8.36□□□□□ -1.07
RNU6-88P-201ENST00000606801 PROCA1Q8NCQ7 364 aaPredicted RBP8.36□□□□□ -1.07
RNU6-88P-201ENST00000606801 PRR14Q9BWN1 585 aa8.36□□□□□ -1.07
RNU6-88P-201ENST00000606801 GCGRP47871 477 aa8.35□□□□□ -1.07
RNU6-88P-201ENST00000606801 KCNC4Q03721 635 aa8.35□□□□□ -1.07
RNU6-88P-201ENST00000606801 SKIV2LQ15477 1246 aaKnown RBP8.35□□□□□ -1.07
RNU6-88P-201ENST00000606801 RSPH4AQ5TD94 716 aa8.35□□□□□ -1.07
RNU6-88P-201ENST00000606801 FBXO31Q5XUX0 539 aaPredicted RBP8.35□□□□□ -1.07
RNU6-88P-201ENST00000606801 CFHP08603 1231 aa8.34□□□□□ -1.07
RNU6-88P-201ENST00000606801 RDH13Q8NBN7 331 aa8.34□□□□□ -1.07
RNU6-88P-201ENST00000606801 RSPH6AQ9H0K4 717 aa8.34□□□□□ -1.07
RNU6-88P-201ENST00000606801 POLR3EQ9NVU0 708 aa8.34□□□□□ -1.07
RNU6-88P-201ENST00000606801 MOXD2PA6NHM9 499 aa8.33□□□□□ -1.08
RNU6-88P-201ENST00000606801 ACTN4O43707 911 aaKnown RBP8.33□□□□□ -1.08
RNU6-88P-201ENST00000606801 KMT5BQ4FZB7 885 aa8.33□□□□□ -1.08
RNU6-88P-201ENST00000606801 MTRQ99707 1265 aa8.33□□□□□ -1.08
RNU6-88P-201ENST00000606801 IL21Q9HBE4 155 aa8.33□□□□□ -1.08
RNU6-88P-201ENST00000606801 LIMD1Q9UGP4 676 aa8.33□□□□□ -1.08
RNU6-88P-201ENST00000606801 NDUFV2P19404 249 aa8.32□□□□□ -1.08
RNU6-88P-201ENST00000606801 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.32□□□□□ -1.08
RNU6-88P-201ENST00000606801 KDM4AO75164 1064 aa8.31□□□□□ -1.08
RNU6-88P-201ENST00000606801 PCDHB3Q9Y5E6 796 aa8.31□□□□□ -1.08
RNU6-88P-201ENST00000606801 SPTLC1O15269 473 aa8.3□□□□□ -1.08
RNU6-88P-201ENST00000606801 RIC3Q7Z5B4 369 aa8.3□□□□□ -1.08
RNU6-88P-201ENST00000606801 NUTM1Q86Y26 1132 aa8.3□□□□□ -1.08
RNU6-88P-201ENST00000606801 ZNF516Q92618 1163 aa8.3□□□□□ -1.08
RNU6-88P-201ENST00000606801 HLA-CQ95604 372 aa8.3□□□□□ -1.08
RNU6-88P-201ENST00000606801 PCMTD1Q96MG8 357 aaPredicted RBP8.3□□□□□ -1.08
RNU6-88P-201ENST00000606801 A0A0G2JS52 829 aa8.29□□□□□ -1.08
RNU6-88P-201ENST00000606801 CLK2P49760 499 aaKnown RBP8.29□□□□□ -1.08
RNU6-88P-201ENST00000606801 COPS2P61201 443 aa8.29□□□□□ -1.08
RNU6-88P-201ENST00000606801 DIXDC1Q155Q3 683 aa8.29□□□□□ -1.08
RNU6-88P-201ENST00000606801 RSBN1LQ6PCB5 846 aaPredicted RBP8.29□□□□□ -1.08
RNU6-88P-201ENST00000606801 BLOC1S3Q6QNY0 202 aa8.29□□□□□ -1.08
RNU6-88P-201ENST00000606801 PCDHB15Q9Y5E8 787 aa8.29□□□□□ -1.08
RNU6-88P-201ENST00000606801 HOXA2O43364 376 aa8.28□□□□□ -1.08
RNU6-88P-201ENST00000606801 GUCA2AQ02747 115 aa8.28□□□□□ -1.08
RNU6-88P-201ENST00000606801 FUT2Q10981 343 aa8.28□□□□□ -1.08
RNU6-88P-201ENST00000606801 PCDHGC3Q9UN70 934 aa8.28□□□□□ -1.08
RNU6-88P-201ENST00000606801 ZPR1O75312 459 aa8.27□□□□□ -1.09
RNU6-88P-201ENST00000606801 TUSC1Q2TAM9 212 aa8.27□□□□□ -1.09
RNU6-88P-201ENST00000606801 TIMELESSQ9UNS1 1208 aa8.27□□□□□ -1.09
RNU6-88P-201ENST00000606801 GJA5P36382 358 aa8.25□□□□□ -1.09
RNU6-88P-201ENST00000606801 USP46P62068 366 aa8.25□□□□□ -1.09
RNU6-88P-201ENST00000606801 QPCTQ16769 361 aa8.25□□□□□ -1.09
RNU6-88P-201ENST00000606801 PUS10Q3MIT2 529 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms