RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 EFCC1Q9HA90 598 aa4.11□□□□□ -1.75
NEB-218ENST00000603639 ZBTB7CA1YPR0 619 aa4.1□□□□□ -1.75
NEB-218ENST00000603639 ANKRD20A12PQ8NF67 263 aa4.1□□□□□ -1.75
NEB-218ENST00000603639 LEKR1Q6ZMV7 388 aa4.1□□□□□ -1.75
NEB-218ENST00000603639 SYNE3Q6ZMZ3 975 aa4.1□□□□□ -1.75
NEB-218ENST00000603639 KIF18AQ8NI77 898 aa4.1□□□□□ -1.75
NEB-218ENST00000603639 KIF27Q86VH2 1401 aa4.1□□□□□ -1.75
NEB-218ENST00000603639 REC8O95072 547 aa4.1□□□□□ -1.75
NEB-218ENST00000603639 RSPH4AQ5TD94 716 aa4.1□□□□□ -1.75
NEB-218ENST00000603639 PLPPR3Q6T4P5 718 aa4.1□□□□□ -1.75
NEB-218ENST00000603639 ZKSCAN1P17029 563 aaPredicted RBP4.1□□□□□ -1.75
NEB-218ENST00000603639 ZNHIT6Q9NWK9 470 aaKnown RBP4.1□□□□□ -1.75
NEB-218ENST00000603639 JAKMIP3Q5VZ66 844 aa4.1□□□□□ -1.75
NEB-218ENST00000603639 IVLP07476 585 aa4.1□□□□□ -1.75
NEB-218ENST00000603639 WASHC2AQ641Q2 1341 aa4.1□□□□□ -1.75
NEB-218ENST00000603639 WASHC2CQ9Y4E1 1318 aa4.1□□□□□ -1.75
NEB-218ENST00000603639 CC2D2AQ9P2K1 1620 aa4.1□□□□□ -1.75
NEB-218ENST00000603639 TXLNBQ8N3L3 684 aa4.1□□□□□ -1.75
NEB-218ENST00000603639 MYO6Q9UM54 1294 aa4.1□□□□□ -1.75
NEB-218ENST00000603639 NF2P35240 595 aa4.1□□□□□ -1.75
NEB-218ENST00000603639 SEPT14Q6ZU15 432 aa4.1□□□□□ -1.75
NEB-218ENST00000603639 ANKRD45Q5TZF3 282 aa4.09□□□□□ -1.75
NEB-218ENST00000603639 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.09□□□□□ -1.75
NEB-218ENST00000603639 GOLGA6L7A0A1B0GV03 622 aa4.09□□□□□ -1.75
NEB-218ENST00000603639 HOXA7P31268 230 aaPredicted RBP4.09□□□□□ -1.75
NEB-218ENST00000603639 PLEKHD1A6NEE1 506 aa4.09□□□□□ -1.75
NEB-218ENST00000603639 TUBB6Q9BUF5 446 aa4.09□□□□□ -1.75
NEB-218ENST00000603639 PSMA5P28066 241 aa4.09□□□□□ -1.75
NEB-218ENST00000603639 CCDC191Q8NCU4 936 aa4.09□□□□□ -1.75
NEB-218ENST00000603639 CC2D1BQ5T0F9 858 aaKnown RBP4.09□□□□□ -1.75
NEB-218ENST00000603639 TPD52L1Q16890 204 aaPredicted RBP4.09□□□□□ -1.75
NEB-218ENST00000603639 CCDC173Q0VFZ6 552 aa4.09□□□□□ -1.75
NEB-218ENST00000603639 ODF2Q5BJF6 829 aa4.09□□□□□ -1.75
NEB-218ENST00000603639 KCNJ4P48050 445 aa4.09□□□□□ -1.75
NEB-218ENST00000603639 CPSF2Q9P2I0 782 aaKnown RBP4.09□□□□□ -1.75
NEB-218ENST00000603639 ZSCAN30Q86W11 494 aa4.09□□□□□ -1.75
NEB-218ENST00000603639 HSP90AB4PQ58FF6 505 aa4.09□□□□□ -1.76
NEB-218ENST00000603639 ZSCAN31Q96LW9 406 aaPredicted RBP4.09□□□□□ -1.76
NEB-218ENST00000603639 INCENPQ9NQS7 918 aa4.09□□□□□ -1.76
NEB-218ENST00000603639 DNAAF4Q8WXU2 420 aa4.09□□□□□ -1.76
NEB-218ENST00000603639 AKNAQ7Z591 1439 aa4.08□□□□□ -1.76
NEB-218ENST00000603639 CCDC47Q96A33 483 aaKnown RBP4.08□□□□□ -1.76
NEB-218ENST00000603639 ANKRD18AQ8IVF6 992 aa4.08□□□□□ -1.76
NEB-218ENST00000603639 ZNF526Q8TF50 670 aaPredicted RBP4.08□□□□□ -1.76
NEB-218ENST00000603639 FRAT1Q92837 279 aaPredicted RBP4.08□□□□□ -1.76
NEB-218ENST00000603639 ATP8B1O43520 1251 aa4.08□□□□□ -1.76
NEB-218ENST00000603639 LMBR1Q8WVP7 490 aa4.08□□□□□ -1.76
NEB-218ENST00000603639 DHX37Q8IY37 1157 aaKnown RBP4.08□□□□□ -1.76
NEB-218ENST00000603639 CCDC196A0A1B0GTZ2 297 aa4.08□□□□□ -1.76
NEB-218ENST00000603639 RBM25P49756 843 aaKnown RBP4.08□□□□□ -1.76
NEB-218ENST00000603639 TCP11Q8WWU5 503 aa4.08□□□□□ -1.76
NEB-218ENST00000603639 NOL10Q9BSC4 688 aaKnown RBP4.08□□□□□ -1.76
NEB-218ENST00000603639 PIP4K2AP48426 406 aaPredicted RBP4.08□□□□□ -1.76
NEB-218ENST00000603639 E9PSI1 815 aa4.08□□□□□ -1.76
NEB-218ENST00000603639 IPO7O95373 1038 aaKnown RBP4.08□□□□□ -1.76
NEB-218ENST00000603639 AKAP17AQ02040 695 aaKnown RBP4.08□□□□□ -1.76
NEB-218ENST00000603639 BACH2Q9BYV9 841 aa4.08□□□□□ -1.76
NEB-218ENST00000603639 POLE3Q9NRF9 147 aa4.08□□□□□ -1.76
NEB-218ENST00000603639 H0YHG0 523 aa4.08□□□□□ -1.76
NEB-218ENST00000603639 BBXQ8WY36 941 aaPredicted RBP4.08□□□□□ -1.76
NEB-218ENST00000603639 GIMAP7Q8NHV1 300 aa4.08□□□□□ -1.76
NEB-218ENST00000603639 GBP3Q9H0R5 595 aa4.08□□□□□ -1.76
NEB-218ENST00000603639 FILIP1LQ4L180 1135 aa4.08□□□□□ -1.76
NEB-218ENST00000603639 CCDC112Q8NEF3 446 aa4.08□□□□□ -1.76
NEB-218ENST00000603639 ROCK2O75116 1388 aaKnown RBP4.08□□□□□ -1.76
NEB-218ENST00000603639 CIZ1Q9ULV3 898 aaPredicted RBP4.08□□□□□ -1.76
NEB-218ENST00000603639 CREBRFQ8IUR6 639 aa4.08□□□□□ -1.76
NEB-218ENST00000603639 PDCP20941 246 aa4.08□□□□□ -1.76
NEB-218ENST00000603639 R3HCC1Q9Y3T6 440 aaKnown RBP4.08□□□□□ -1.76
NEB-218ENST00000603639 CTAGE5O15320 804 aa4.07□□□□□ -1.76
NEB-218ENST00000603639 PPFIA3O75145 1194 aa4.07□□□□□ -1.76
NEB-218ENST00000603639 SMARCA4P51532 1647 aa4.07□□□□□ -1.76
NEB-218ENST00000603639 TNIKQ9UKE5 1360 aa4.07□□□□□ -1.76
NEB-218ENST00000603639 SETD5Q9C0A6 1442 aa4.07□□□□□ -1.76
NEB-218ENST00000603639 TPRNQ4KMQ1 711 aa4.07□□□□□ -1.76
NEB-218ENST00000603639 USH1CQ9Y6N9 552 aa4.07□□□□□ -1.76
NEB-218ENST00000603639 CLCN1P35523 988 aa4.07□□□□□ -1.76
NEB-218ENST00000603639 MAP2K1Q02750 393 aaPredicted RBP4.07□□□□□ -1.76
NEB-218ENST00000603639 ZNF397Q8NF99 534 aaPredicted RBP4.07□□□□□ -1.76
NEB-218ENST00000603639 RASSF4Q9H2L5 321 aa4.07□□□□□ -1.76
NEB-218ENST00000603639 ANKRD1Q15327 319 aa4.07□□□□□ -1.76
NEB-218ENST00000603639 SCRIBQ14160 1630 aa4.07□□□□□ -1.76
NEB-218ENST00000603639 DDX12PQ92771 950 aa4.07□□□□□ -1.76
NEB-218ENST00000603639 SH2D4BQ5SQS7 431 aa4.07□□□□□ -1.76
NEB-218ENST00000603639 SRRTQ9BXP5 876 aaKnown RBP4.07□□□□□ -1.76
NEB-218ENST00000603639 CPLX2Q6PUV4 134 aaKnown RBP4.07□□□□□ -1.76
NEB-218ENST00000603639 ZSCAN12O43309 604 aa4.07□□□□□ -1.76
NEB-218ENST00000603639 EIF3JO75822 258 aaKnown RBP4.07□□□□□ -1.76
NEB-218ENST00000603639 CCDC192P0DO97 292 aa4.07□□□□□ -1.76
NEB-218ENST00000603639 FILIP1Q7Z7B0 1213 aa4.07□□□□□ -1.76
NEB-218ENST00000603639 MKRN1Q9UHC7 482 aaKnown RBP4.07□□□□□ -1.76
NEB-218ENST00000603639 FYB1O15117 783 aa4.07□□□□□ -1.76
NEB-218ENST00000603639 ERLIN1O75477 346 aa4.07□□□□□ -1.76
NEB-218ENST00000603639 ZNF592Q92610 1267 aa4.07□□□□□ -1.76
NEB-218ENST00000603639 PPFIBP1Q86W92 1011 aa4.07□□□□□ -1.76
NEB-218ENST00000603639 PTPN14Q15678 1187 aa4.06□□□□□ -1.76
NEB-218ENST00000603639 OFD1O75665 1012 aa4.06□□□□□ -1.76
NEB-218ENST00000603639 MRVI1Q9Y6F6 885 aa4.06□□□□□ -1.76
NEB-218ENST00000603639 MCM6Q14566 821 aa4.06□□□□□ -1.76
NEB-218ENST00000603639 ZNF622Q969S3 477 aaKnown RBP eCLIP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms