RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 A2ML1A8K2U0 1454 aa24.56■■□□□ 1.52
PPFIA3-207ENST00000602716 NRXN1Q9ULB1 1477 aa24.56■■□□□ 1.52
PPFIA3-207ENST00000602716 HSPA5P11021 654 aaKnown RBP24.56■■□□□ 1.52
PPFIA3-207ENST00000602716 NUTM2DQ5VT03 806 aaPredicted RBP24.56■■□□□ 1.52
PPFIA3-207ENST00000602716 ROCK2O75116 1388 aaKnown RBP24.55■■□□□ 1.52
PPFIA3-207ENST00000602716 CENPBP07199 599 aaPredicted RBP24.55■■□□□ 1.52
PPFIA3-207ENST00000602716 GPRASP1Q5JY77 1395 aa24.51■■□□□ 1.51
PPFIA3-207ENST00000602716 USP47Q96K76 1375 aa24.51■■□□□ 1.51
PPFIA3-207ENST00000602716 PIK3C2GO75747 1445 aa24.51■■□□□ 1.51
PPFIA3-207ENST00000602716 CARD11Q9BXL7 1154 aa24.51■■□□□ 1.51
PPFIA3-207ENST00000602716 RPGRIP1LQ68CZ1 1315 aa24.5■■□□□ 1.51
PPFIA3-207ENST00000602716 EIF4G2P78344 907 aaKnown RBP eCLIP24.49■■□□□ 1.51
PPFIA3-207ENST00000602716 STAG3Q9UJ98 1225 aa24.49■■□□□ 1.51
PPFIA3-207ENST00000602716 UBR1Q8IWV7 1749 aa24.47■■□□□ 1.51
PPFIA3-207ENST00000602716 SENP3Q9H4L4 574 aaPredicted RBP24.47■■□□□ 1.51
PPFIA3-207ENST00000602716 MYO3AQ8NEV4 1616 aa24.47■■□□□ 1.51
PPFIA3-207ENST00000602716 CFAP70Q5T0N1 1121 aa24.47■■□□□ 1.51
PPFIA3-207ENST00000602716 STAC3Q96MF2 364 aa24.47■■□□□ 1.51
PPFIA3-207ENST00000602716 NLRP1Q9C000 1473 aa24.46■■□□□ 1.51
PPFIA3-207ENST00000602716 LAMC1P11047 1609 aa24.45■■□□□ 1.51
PPFIA3-207ENST00000602716 ZFYVE9O95405 1425 aa24.44■■□□□ 1.5
PPFIA3-207ENST00000602716 RIMS2Q9UQ26 1411 aa24.44■■□□□ 1.5
PPFIA3-207ENST00000602716 KIAA1210Q9ULL0 1709 aa24.43■■□□□ 1.5
PPFIA3-207ENST00000602716 PTPRMP28827 1452 aa24.42■■□□□ 1.5
PPFIA3-207ENST00000602716 KDM5AP29375 1690 aaKnown RBP24.41■■□□□ 1.5
PPFIA3-207ENST00000602716 VGFO15240 615 aaPredicted RBP24.39■■□□□ 1.5
PPFIA3-207ENST00000602716 IQGAP1P46940 1657 aa24.39■■□□□ 1.5
PPFIA3-207ENST00000602716 ADGRB1O14514 1584 aa24.39■■□□□ 1.49
PPFIA3-207ENST00000602716 PELP1Q8IZL8 1130 aaKnown RBP24.39■■□□□ 1.49
PPFIA3-207ENST00000602716 C11orf95C9JLR9 678 aaPredicted RBP24.38■■□□□ 1.49
PPFIA3-207ENST00000602716 ASXL1Q8IXJ9 1541 aa24.38■■□□□ 1.49
PPFIA3-207ENST00000602716 TMEM2Q9UHN6 1383 aa24.37■■□□□ 1.49
PPFIA3-207ENST00000602716 CEP170BQ9Y4F5 1589 aaPredicted RBP24.36■■□□□ 1.49
PPFIA3-207ENST00000602716 ST20-MTHFSA0A0A6YYL1 179 aa24.36■■□□□ 1.49
PPFIA3-207ENST00000602716 C14orf93Q9H972 538 aaKnown RBP24.36■■□□□ 1.49
PPFIA3-207ENST00000602716 MIER1Q8N108 512 aa24.34■■□□□ 1.49
PPFIA3-207ENST00000602716 GTF3C3Q9Y5Q9 886 aa24.34■■□□□ 1.49
PPFIA3-207ENST00000602716 SCAF11Q99590 1463 aaKnown RBP24.34■■□□□ 1.49
PPFIA3-207ENST00000602716 SETBP1Q9Y6X0 1596 aa24.34■■□□□ 1.49
PPFIA3-207ENST00000602716 WASHC2AQ641Q2 1341 aa24.34■■□□□ 1.49
PPFIA3-207ENST00000602716 TMEM132EQ6IEE7 984 aa24.33■■□□□ 1.49
PPFIA3-207ENST00000602716 NRXN3Q9Y4C0 1643 aa24.33■■□□□ 1.48
PPFIA3-207ENST00000602716 ARHGAP23Q9P227 1491 aa24.31■■□□□ 1.48
PPFIA3-207ENST00000602716 ALKQ9UM73 1620 aa24.31■■□□□ 1.48
PPFIA3-207ENST00000602716 ZNF142P52746 1687 aaPredicted RBP24.3■■□□□ 1.48
PPFIA3-207ENST00000602716 SLIT1O75093 1534 aa24.3■■□□□ 1.48
PPFIA3-207ENST00000602716 LTKP29376 864 aa24.3■■□□□ 1.48
PPFIA3-207ENST00000602716 SETD1AO15047 1707 aaKnown RBP24.28■■□□□ 1.48
PPFIA3-207ENST00000602716 KIF7Q2M1P5 1343 aa24.28■■□□□ 1.48
PPFIA3-207ENST00000602716 CCDC7Q96M83 1385 aa24.28■■□□□ 1.48
PPFIA3-207ENST00000602716 KDM4FA0A1W2PPD8 638 aa24.27■■□□□ 1.48
PPFIA3-207ENST00000602716 TESK2Q96S53 571 aa24.27■■□□□ 1.48
PPFIA3-207ENST00000602716 DDX10Q13206 875 aaKnown RBP24.26■■□□□ 1.47
PPFIA3-207ENST00000602716 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.25■■□□□ 1.47
PPFIA3-207ENST00000602716 TRAK1Q9UPV9 953 aa24.23■■□□□ 1.47
PPFIA3-207ENST00000602716 DISP3Q9P2K9 1392 aa24.22■■□□□ 1.47
PPFIA3-207ENST00000602716 POLR1AO95602 1720 aaPredicted RBP24.22■■□□□ 1.47
PPFIA3-207ENST00000602716 TXNDC2Q86VQ3 553 aa24.22■■□□□ 1.47
PPFIA3-207ENST00000602716 ADAMTS13Q76LX8 1427 aa24.21■■□□□ 1.47
PPFIA3-207ENST00000602716 THEMISQ8N1K5 641 aaPredicted RBP24.21■■□□□ 1.47
PPFIA3-207ENST00000602716 PLEKHG1Q9ULL1 1385 aa24.2■■□□□ 1.46
PPFIA3-207ENST00000602716 ARHGEF28Q8N1W1 1705 aaKnown RBP24.2■■□□□ 1.46
PPFIA3-207ENST00000602716 EIF3AQ14152 1382 aaKnown RBP24.19■■□□□ 1.46
PPFIA3-207ENST00000602716 METP08581 1390 aa24.19■■□□□ 1.46
PPFIA3-207ENST00000602716 YTHDC2Q9H6S0 1430 aaKnown RBP24.18■■□□□ 1.46
PPFIA3-207ENST00000602716 YTHDC1Q96MU7 727 aaKnown RBP24.18■■□□□ 1.46
PPFIA3-207ENST00000602716 POLR3GLQ9BT43 218 aa24.17■■□□□ 1.46
PPFIA3-207ENST00000602716 STK26Q9P289 416 aa24.17■■□□□ 1.46
PPFIA3-207ENST00000602716 HDGFP51858 240 aaKnown RBP24.15■■□□□ 1.46
PPFIA3-207ENST00000602716 EID1Q9Y6B2 187 aa24.15■■□□□ 1.46
PPFIA3-207ENST00000602716 SETD1BQ9UPS6 1966 aaKnown RBP24.15■■□□□ 1.46
PPFIA3-207ENST00000602716 BCANQ96GW7 911 aa24.14■■□□□ 1.45
PPFIA3-207ENST00000602716 MED14O60244 1454 aa24.14■■□□□ 1.45
PPFIA3-207ENST00000602716 QRICH2Q9H0J4 1663 aa24.13■■□□□ 1.45
PPFIA3-207ENST00000602716 CENPJQ9HC77 1338 aaPredicted RBP24.13■■□□□ 1.45
PPFIA3-207ENST00000602716 SLC26A8Q96RN1 970 aa24.11■■□□□ 1.45
PPFIA3-207ENST00000602716 LRPPRCP42704 1394 aaKnown RBP24.11■■□□□ 1.45
PPFIA3-207ENST00000602716 SAFB2Q14151 953 aaKnown RBP eCLIP24.08■■□□□ 1.45
PPFIA3-207ENST00000602716 TMF1P82094 1093 aa24.08■■□□□ 1.44
PPFIA3-207ENST00000602716 PTPRUQ92729 1446 aa24.07■■□□□ 1.44
PPFIA3-207ENST00000602716 PLEKHH1Q9ULM0 1364 aa24.07■■□□□ 1.44
PPFIA3-207ENST00000602716 SBNO2Q9Y2G9 1366 aa24.07■■□□□ 1.44
PPFIA3-207ENST00000602716 PRAM1Q96QH2 718 aa24.06■■□□□ 1.44
PPFIA3-207ENST00000602716 DLC1Q96QB1 1528 aa24.06■■□□□ 1.44
PPFIA3-207ENST00000602716 TULP4Q9NRJ4 1543 aa24.05■■□□□ 1.44
PPFIA3-207ENST00000602716 ABCC11Q96J66 1382 aa24.04■■□□□ 1.44
PPFIA3-207ENST00000602716 ANKLE2Q86XL3 938 aa24.04■■□□□ 1.44
PPFIA3-207ENST00000602716 DIP2AQ14689 1571 aa24.03■■□□□ 1.44
PPFIA3-207ENST00000602716 KNDC1Q76NI1 1749 aa24.03■■□□□ 1.44
PPFIA3-207ENST00000602716 TECPR2O15040 1411 aa24.03■■□□□ 1.44
PPFIA3-207ENST00000602716 CPS1P31327 1500 aa24.03■■□□□ 1.44
PPFIA3-207ENST00000602716 WAPLQ7Z5K2 1190 aa24.01■■□□□ 1.43
PPFIA3-207ENST00000602716 LMTK3Q96Q04 1460 aa24.01■■□□□ 1.43
PPFIA3-207ENST00000602716 NCKAP5LQ9HCH0 1330 aa24.01■■□□□ 1.43
PPFIA3-207ENST00000602716 ROBO2Q9HCK4 1378 aa24■■□□□ 1.43
PPFIA3-207ENST00000602716 HSPA2P54652 639 aa24■■□□□ 1.43
PPFIA3-207ENST00000602716 MYOM1P52179 1685 aa24■■□□□ 1.43
PPFIA3-207ENST00000602716 TBX22Q9Y458 520 aa24■■□□□ 1.43
PPFIA3-207ENST00000602716 NPHP4O75161 1426 aaPredicted RBP23.99■■□□□ 1.43
PPFIA3-207ENST00000602716 MINK1Q8N4C8 1332 aaPredicted RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms