RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 NEXMIFQ5QGS0 1516 aa26.45■■□□□ 1.83
SSBP4-212ENST00000601919 VGFO15240 615 aaPredicted RBP26.45■■□□□ 1.82
SSBP4-212ENST00000601919 HDGFP51858 240 aaKnown RBP26.44■■□□□ 1.82
SSBP4-212ENST00000601919 NBPF8Q3BBV2 869 aa26.44■■□□□ 1.82
SSBP4-212ENST00000601919 CEP170BQ9Y4F5 1589 aaPredicted RBP26.41■■□□□ 1.82
SSBP4-212ENST00000601919 ZNF142P52746 1687 aaPredicted RBP26.41■■□□□ 1.82
SSBP4-212ENST00000601919 ZFYVE9O95405 1425 aa26.41■■□□□ 1.82
SSBP4-212ENST00000601919 KDM4FA0A1W2PPD8 638 aa26.4■■□□□ 1.82
SSBP4-212ENST00000601919 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.4■■□□□ 1.82
SSBP4-212ENST00000601919 RALGAPBQ86X10 1494 aa26.39■■□□□ 1.82
SSBP4-212ENST00000601919 NRXN1Q9ULB1 1477 aa26.39■■□□□ 1.82
SSBP4-212ENST00000601919 THEMISQ8N1K5 641 aaPredicted RBP26.39■■□□□ 1.82
SSBP4-212ENST00000601919 RIMS2Q9UQ26 1411 aa26.39■■□□□ 1.81
SSBP4-212ENST00000601919 KIAA1210Q9ULL0 1709 aa26.38■■□□□ 1.81
SSBP4-212ENST00000601919 TRPM1Q7Z4N2 1603 aa26.38■■□□□ 1.81
SSBP4-212ENST00000601919 TMEM2Q9UHN6 1383 aa26.36■■□□□ 1.81
SSBP4-212ENST00000601919 ADGRF5Q8IZF2 1346 aa26.35■■□□□ 1.81
SSBP4-212ENST00000601919 SLIT1O75093 1534 aa26.33■■□□□ 1.81
SSBP4-212ENST00000601919 ROCK2O75116 1388 aaKnown RBP26.33■■□□□ 1.8
SSBP4-212ENST00000601919 PIK3C2GO75747 1445 aa26.32■■□□□ 1.8
SSBP4-212ENST00000601919 EID1Q9Y6B2 187 aa26.31■■□□□ 1.8
SSBP4-212ENST00000601919 LAMC1P11047 1609 aa26.31■■□□□ 1.8
SSBP4-212ENST00000601919 ARHGAP23Q9P227 1491 aa26.3■■□□□ 1.8
SSBP4-212ENST00000601919 NUTM2DQ5VT03 806 aaPredicted RBP26.29■■□□□ 1.8
SSBP4-212ENST00000601919 CARD11Q9BXL7 1154 aa26.27■■□□□ 1.8
SSBP4-212ENST00000601919 GPRASP1Q5JY77 1395 aa26.27■■□□□ 1.8
SSBP4-212ENST00000601919 C14orf93Q9H972 538 aaKnown RBP26.26■■□□□ 1.79
SSBP4-212ENST00000601919 EIF4G2P78344 907 aaKnown RBP eCLIP26.25■■□□□ 1.79
SSBP4-212ENST00000601919 TXNDC2Q86VQ3 553 aa26.25■■□□□ 1.79
SSBP4-212ENST00000601919 SETBP1Q9Y6X0 1596 aa26.24■■□□□ 1.79
SSBP4-212ENST00000601919 CFAP70Q5T0N1 1121 aa26.23■■□□□ 1.79
SSBP4-212ENST00000601919 NBPF1Q3BBV0 1214 aa26.22■■□□□ 1.79
SSBP4-212ENST00000601919 SCAF11Q99590 1463 aaKnown RBP26.21■■□□□ 1.79
SSBP4-212ENST00000601919 PLEKHG1Q9ULL1 1385 aa26.2■■□□□ 1.79
SSBP4-212ENST00000601919 ANKLE2Q86XL3 938 aa26.19■■□□□ 1.78
SSBP4-212ENST00000601919 USP47Q96K76 1375 aa26.19■■□□□ 1.78
SSBP4-212ENST00000601919 ALKQ9UM73 1620 aa26.18■■□□□ 1.78
SSBP4-212ENST00000601919 ZNF316A6NFI3 1004 aaPredicted RBP26.18■■□□□ 1.78
SSBP4-212ENST00000601919 LTKP29376 864 aa26.18■■□□□ 1.78
SSBP4-212ENST00000601919 BCANQ96GW7 911 aa26.17■■□□□ 1.78
SSBP4-212ENST00000601919 IQGAP1P46940 1657 aa26.15■■□□□ 1.78
SSBP4-212ENST00000601919 NRXN3Q9Y4C0 1643 aa26.14■■□□□ 1.78
SSBP4-212ENST00000601919 HSPA5P11021 654 aaKnown RBP26.14■■□□□ 1.78
SSBP4-212ENST00000601919 ADGRB1O14514 1584 aa26.13■■□□□ 1.77
SSBP4-212ENST00000601919 EIF3AQ14152 1382 aaKnown RBP26.13■■□□□ 1.77
SSBP4-212ENST00000601919 POLR1AO95602 1720 aaPredicted RBP26.13■■□□□ 1.77
SSBP4-212ENST00000601919 SETD1AO15047 1707 aaKnown RBP26.11■■□□□ 1.77
SSBP4-212ENST00000601919 DIP2AQ14689 1571 aa26.11■■□□□ 1.77
SSBP4-212ENST00000601919 TMEM132EQ6IEE7 984 aa26.08■■□□□ 1.77
SSBP4-212ENST00000601919 SENP3Q9H4L4 574 aaPredicted RBP26.08■■□□□ 1.77
SSBP4-212ENST00000601919 LMTK3Q96Q04 1460 aa26.07■■□□□ 1.76
SSBP4-212ENST00000601919 ADAMTS13Q76LX8 1427 aa26.06■■□□□ 1.76
SSBP4-212ENST00000601919 TBX22Q9Y458 520 aa26.06■■□□□ 1.76
SSBP4-212ENST00000601919 ASXL1Q8IXJ9 1541 aa26.05■■□□□ 1.76
SSBP4-212ENST00000601919 MED14O60244 1454 aa26.04■■□□□ 1.76
SSBP4-212ENST00000601919 HIRIP3Q9BW71 556 aaPredicted RBP26.04■■□□□ 1.76
SSBP4-212ENST00000601919 YTHDC2Q9H6S0 1430 aaKnown RBP26.04■■□□□ 1.76
SSBP4-212ENST00000601919 ST20-MTHFSA0A0A6YYL1 179 aa26.03■■□□□ 1.76
SSBP4-212ENST00000601919 NPHP4O75161 1426 aaPredicted RBP26.03■■□□□ 1.76
SSBP4-212ENST00000601919 SLC24A1O60721 1099 aa26.02■■□□□ 1.76
SSBP4-212ENST00000601919 LRPPRCP42704 1394 aaKnown RBP26.01■■□□□ 1.75
SSBP4-212ENST00000601919 TRAK1Q9UPV9 953 aa26.01■■□□□ 1.75
SSBP4-212ENST00000601919 METP08581 1390 aa26■■□□□ 1.75
SSBP4-212ENST00000601919 SLC26A8Q96RN1 970 aa26■■□□□ 1.75
SSBP4-212ENST00000601919 ARHGEF28Q8N1W1 1705 aaKnown RBP26■■□□□ 1.75
SSBP4-212ENST00000601919 ABCC11Q96J66 1382 aa25.98■■□□□ 1.75
SSBP4-212ENST00000601919 PIK3R4Q99570 1358 aa25.98■■□□□ 1.75
SSBP4-212ENST00000601919 NCKAP5LQ9HCH0 1330 aa25.98■■□□□ 1.75
SSBP4-212ENST00000601919 KNDC1Q76NI1 1749 aa25.98■■□□□ 1.75
SSBP4-212ENST00000601919 DLC1Q96QB1 1528 aa25.98■■□□□ 1.75
SSBP4-212ENST00000601919 STK26Q9P289 416 aa25.97■■□□□ 1.75
SSBP4-212ENST00000601919 CENPJQ9HC77 1338 aaPredicted RBP25.96■■□□□ 1.75
SSBP4-212ENST00000601919 HSPA2P54652 639 aa25.96■■□□□ 1.75
SSBP4-212ENST00000601919 TECPR2O15040 1411 aa25.94■■□□□ 1.74
SSBP4-212ENST00000601919 QRICH2Q9H0J4 1663 aa25.93■■□□□ 1.74
SSBP4-212ENST00000601919 SIRT1Q96EB6 747 aa25.93■■□□□ 1.74
SSBP4-212ENST00000601919 SBNO2Q9Y2G9 1366 aa25.93■■□□□ 1.74
SSBP4-212ENST00000601919 TMF1P82094 1093 aa25.91■■□□□ 1.74
SSBP4-212ENST00000601919 TESK2Q96S53 571 aa25.91■■□□□ 1.74
SSBP4-212ENST00000601919 POGKQ9P215 609 aa25.91■■□□□ 1.74
SSBP4-212ENST00000601919 CPS1P31327 1500 aa25.91■■□□□ 1.74
SSBP4-212ENST00000601919 FAM135BQ49AJ0 1406 aa25.89■■□□□ 1.74
SSBP4-212ENST00000601919 CHD2O14647 1828 aaKnown RBP25.88■■□□□ 1.73
SSBP4-212ENST00000601919 STRCQ7RTU9 1775 aa25.88■■□□□ 1.73
SSBP4-212ENST00000601919 CDCA8Q53HL2 280 aa25.88■■□□□ 1.73
SSBP4-212ENST00000601919 PRAM1Q96QH2 718 aa25.87■■□□□ 1.73
SSBP4-212ENST00000601919 AMOTL2Q9Y2J4 779 aa25.87■■□□□ 1.73
SSBP4-212ENST00000601919 XRN1Q8IZH2 1706 aaKnown RBP25.86■■□□□ 1.73
SSBP4-212ENST00000601919 CCDC7Q96M83 1385 aa25.86■■□□□ 1.73
SSBP4-212ENST00000601919 PTPRUQ92729 1446 aa25.86■■□□□ 1.73
SSBP4-212ENST00000601919 PTCH1Q13635 1447 aa25.85■■□□□ 1.73
SSBP4-212ENST00000601919 WASHC2AQ641Q2 1341 aa25.84■■□□□ 1.73
SSBP4-212ENST00000601919 KIF7Q2M1P5 1343 aa25.83■■□□□ 1.73
SSBP4-212ENST00000601919 C11orf95C9JLR9 678 aaPredicted RBP25.82■■□□□ 1.72
SSBP4-212ENST00000601919 DMRT2Q9Y5R5 561 aa25.81■■□□□ 1.72
SSBP4-212ENST00000601919 KCNA6P17658 529 aa25.8■■□□□ 1.72
SSBP4-212ENST00000601919 EVC2Q86UK5 1308 aa25.8■■□□□ 1.72
SSBP4-212ENST00000601919 ROBO2Q9HCK4 1378 aa25.8■■□□□ 1.72
SSBP4-212ENST00000601919 DISP3Q9P2K9 1392 aa25.8■■□□□ 1.72
SSBP4-212ENST00000601919 NWD1Q149M9 1564 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms