RNA–Protein interactions for RNA: ENST00000601801.2

NEAT1-203, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 4 BASIC

Gene NEAT1, Length 487 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-203ENST00000601801 ADGRB3O60242 1522 aa21.85■■□□□ 1.09
NEAT1-203ENST00000601801 PPARGC1BQ86YN6 1023 aaKnown RBP21.85■■□□□ 1.09
NEAT1-203ENST00000601801 UNC13BO14795 1591 aa21.85■■□□□ 1.09
NEAT1-203ENST00000601801 GCC2Q8IWJ2 1684 aa21.84■■□□□ 1.09
NEAT1-203ENST00000601801 PROSER2Q86WR7 435 aaPredicted RBP21.83■■□□□ 1.09
NEAT1-203ENST00000601801 SETD1AO15047 1707 aaKnown RBP21.83■■□□□ 1.08
NEAT1-203ENST00000601801 NKTRP30414 1462 aaKnown RBP21.83■■□□□ 1.08
NEAT1-203ENST00000601801 ITGAEP38570 1179 aa21.82■■□□□ 1.08
NEAT1-203ENST00000601801 PHLPP1O60346 1717 aa21.82■■□□□ 1.08
NEAT1-203ENST00000601801 SLC26A8Q96RN1 970 aa21.81■■□□□ 1.08
NEAT1-203ENST00000601801 RBM33Q96EV2 1170 aaKnown RBP21.8■■□□□ 1.08
NEAT1-203ENST00000601801 CHD2O14647 1828 aaKnown RBP21.78■■□□□ 1.08
NEAT1-203ENST00000601801 IQGAP3Q86VI3 1631 aa21.77■■□□□ 1.08
NEAT1-203ENST00000601801 E9PCH4 1651 aa21.77■■□□□ 1.08
NEAT1-203ENST00000601801 MSH6P52701 1360 aa21.76■■□□□ 1.07
NEAT1-203ENST00000601801 BCANQ96GW7 911 aa21.76■■□□□ 1.07
NEAT1-203ENST00000601801 MYO5BQ9ULV0 1848 aa21.76■■□□□ 1.07
NEAT1-203ENST00000601801 HDGFP51858 240 aaKnown RBP21.75■■□□□ 1.07
NEAT1-203ENST00000601801 NUP155O75694 1391 aa21.74■■□□□ 1.07
NEAT1-203ENST00000601801 JCADQ9P266 1359 aa21.74■■□□□ 1.07
NEAT1-203ENST00000601801 TMEM131LA2VDJ0 1609 aa21.74■■□□□ 1.07
NEAT1-203ENST00000601801 SLAIN2Q9P270 581 aa21.74■■□□□ 1.07
NEAT1-203ENST00000601801 COL16A1Q07092 1604 aaPredicted RBP21.73■■□□□ 1.07
NEAT1-203ENST00000601801 ZFYVE9O95405 1425 aa21.72■■□□□ 1.07
NEAT1-203ENST00000601801 PPP1R15AO75807 674 aaPredicted RBP21.72■■□□□ 1.07
NEAT1-203ENST00000601801 CHGAP10645 457 aaKnown RBP21.72■■□□□ 1.07
NEAT1-203ENST00000601801 RIMS2Q9UQ26 1411 aa21.72■■□□□ 1.07
NEAT1-203ENST00000601801 PLEKHG1Q9ULL1 1385 aa21.7■■□□□ 1.06
NEAT1-203ENST00000601801 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.68■■□□□ 1.06
NEAT1-203ENST00000601801 LRP6O75581 1613 aa21.66■■□□□ 1.06
NEAT1-203ENST00000601801 RRBP1Q9P2E9 1410 aaKnown RBP21.66■■□□□ 1.06
NEAT1-203ENST00000601801 NCOA3Q9Y6Q9 1424 aa21.65■■□□□ 1.06
NEAT1-203ENST00000601801 SHPRHQ149N8 1683 aa21.64■■□□□ 1.05
NEAT1-203ENST00000601801 SPATA31A6Q5VVP1 1343 aa21.63■■□□□ 1.05
NEAT1-203ENST00000601801 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.63■■□□□ 1.05
NEAT1-203ENST00000601801 AHDC1Q5TGY3 1603 aaPredicted RBP21.62■■□□□ 1.05
NEAT1-203ENST00000601801 TBX22Q9Y458 520 aa21.62■■□□□ 1.05
NEAT1-203ENST00000601801 NUTM2DQ5VT03 806 aaPredicted RBP21.61■■□□□ 1.05
NEAT1-203ENST00000601801 SPHKAPQ2M3C7 1700 aa21.6■■□□□ 1.05
NEAT1-203ENST00000601801 ZNF772Q68DY9 489 aaPredicted RBP21.6■■□□□ 1.05
NEAT1-203ENST00000601801 UPF1Q92900 1129 aaKnown RBP eCLIP21.6■■□□□ 1.05
NEAT1-203ENST00000601801 DIP2AQ14689 1571 aa21.57■■□□□ 1.04
NEAT1-203ENST00000601801 NAIPQ13075 1403 aa21.57■■□□□ 1.04
NEAT1-203ENST00000601801 MEX3CQ5U5Q3 659 aaKnown RBP21.57■■□□□ 1.04
NEAT1-203ENST00000601801 ADAMTS13Q76LX8 1427 aa21.56■■□□□ 1.04
NEAT1-203ENST00000601801 CADPS2Q86UW7 1296 aa21.55■■□□□ 1.04
NEAT1-203ENST00000601801 PIK3R4Q99570 1358 aa21.55■■□□□ 1.04
NEAT1-203ENST00000601801 C14orf37Q86TY3 774 aa21.54■■□□□ 1.04
NEAT1-203ENST00000601801 TRIM52Q96A61 297 aa21.54■■□□□ 1.04
NEAT1-203ENST00000601801 C19orf44Q9H6X5 657 aa21.54■■□□□ 1.04
NEAT1-203ENST00000601801 ZNF326Q5BKZ1 582 aaKnown RBP21.53■■□□□ 1.04
NEAT1-203ENST00000601801 TRPM2O94759 1503 aa21.52■■□□□ 1.04
NEAT1-203ENST00000601801 ATF3P18847 181 aa21.51■■□□□ 1.03
NEAT1-203ENST00000601801 CDK12Q9NYV4 1490 aaPredicted RBP21.51■■□□□ 1.03
NEAT1-203ENST00000601801 HFM1A2PYH4 1435 aa21.5■■□□□ 1.03
NEAT1-203ENST00000601801 RXRBP28702 533 aa21.5■■□□□ 1.03
NEAT1-203ENST00000601801 CLTCL1P53675 1640 aa21.48■■□□□ 1.03
NEAT1-203ENST00000601801 BRINP3Q76B58 766 aa21.48■■□□□ 1.03
NEAT1-203ENST00000601801 AMOTL2Q9Y2J4 779 aa21.47■■□□□ 1.03
NEAT1-203ENST00000601801 SETBP1Q9Y6X0 1596 aa21.47■■□□□ 1.03
NEAT1-203ENST00000601801 PTPRUQ92729 1446 aa21.46■■□□□ 1.03
NEAT1-203ENST00000601801 KIF1BO60333 1816 aa21.46■■□□□ 1.03
NEAT1-203ENST00000601801 NHSL1Q5SYE7 1610 aa21.46■■□□□ 1.03
NEAT1-203ENST00000601801 DCCP43146 1447 aa21.46■■□□□ 1.03
NEAT1-203ENST00000601801 NRXN3Q9Y4C0 1643 aa21.45■■□□□ 1.02
NEAT1-203ENST00000601801 ASXL1Q8IXJ9 1541 aa21.45■■□□□ 1.02
NEAT1-203ENST00000601801 SETD5Q9C0A6 1442 aa21.44■■□□□ 1.02
NEAT1-203ENST00000601801 XRN1Q8IZH2 1706 aaKnown RBP21.43■■□□□ 1.02
NEAT1-203ENST00000601801 NUTM2BA6NNL0 878 aaPredicted RBP21.43■■□□□ 1.02
NEAT1-203ENST00000601801 NUTM2EB1AL46 878 aaPredicted RBP21.43■■□□□ 1.02
NEAT1-203ENST00000601801 NUTM2AQ8IVF1 878 aaPredicted RBP21.43■■□□□ 1.02
NEAT1-203ENST00000601801 SLC4A1APQ9BWU0 796 aaKnown RBP21.43■■□□□ 1.02
NEAT1-203ENST00000601801 AFF2P51816 1311 aa21.42■■□□□ 1.02
NEAT1-203ENST00000601801 NEXMIFQ5QGS0 1516 aa21.42■■□□□ 1.02
NEAT1-203ENST00000601801 MST1RQ04912 1400 aa21.39■■□□□ 1.02
NEAT1-203ENST00000601801 METP08581 1390 aa21.38■■□□□ 1.01
NEAT1-203ENST00000601801 RGS12O14924 1447 aa21.37■■□□□ 1.01
NEAT1-203ENST00000601801 VGFO15240 615 aaPredicted RBP21.36■■□□□ 1.01
NEAT1-203ENST00000601801 LRRC59Q96AG4 307 aaKnown RBP21.36■■□□□ 1.01
NEAT1-203ENST00000601801 PNPLA6Q8IY17 1366 aa21.34■■□□□ 1.01
NEAT1-203ENST00000601801 RPGRIP1LQ68CZ1 1315 aa21.33■■□□□ 1.01
NEAT1-203ENST00000601801 RBM6P78332 1123 aaKnown RBP21.33■■□□□ 1.01
NEAT1-203ENST00000601801 NALCNQ8IZF0 1738 aa21.32■■□□□ 1
NEAT1-203ENST00000601801 QTRT2Q9H974 415 aaKnown RBP21.32■■□□□ 1
NEAT1-203ENST00000601801 C8orf37Q96NL8 207 aa21.31■■□□□ 1
NEAT1-203ENST00000601801 ADGRL3Q9HAR2 1447 aa21.3■■□□□ 1
NEAT1-203ENST00000601801 FOXD1Q16676 465 aa21.3■■□□□ 1
NEAT1-203ENST00000601801 DDX17Q92841 729 aaKnown RBP21.29■■□□□ 1
NEAT1-203ENST00000601801 LAMC1P11047 1609 aa21.29■■□□□ 1
NEAT1-203ENST00000601801 PPLO60437 1756 aa21.28■■□□□ 1
NEAT1-203ENST00000601801 CCDC144AA2RUR9 1427 aa21.27■■□□□ 1
NEAT1-203ENST00000601801 MPHOSPH9Q99550 1183 aa21.26■□□□□ 0.99
NEAT1-203ENST00000601801 ACIN1Q9UKV3 1341 aaKnown RBP21.25■□□□□ 0.99
NEAT1-203ENST00000601801 PTCH1Q13635 1447 aa21.24■□□□□ 0.99
NEAT1-203ENST00000601801 NGLY1Q96IV0 654 aa21.23■□□□□ 0.99
NEAT1-203ENST00000601801 C1orf167Q5SNV9 1468 aa21.23■□□□□ 0.99
NEAT1-203ENST00000601801 ATAD2Q6PL18 1390 aa21.22■□□□□ 0.99
NEAT1-203ENST00000601801 ADAMTS2O95450 1211 aa21.21■□□□□ 0.99
NEAT1-203ENST00000601801 ROBO2Q9HCK4 1378 aa21.21■□□□□ 0.99
NEAT1-203ENST00000601801 RGL3Q3MIN7 710 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms