RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 MROH1Q8NDA8 1641 aa18.09■□□□□ 0.49
ZNF548-210ENST00000600442 EFCAB6Q5THR3 1501 aa18.08■□□□□ 0.49
ZNF548-210ENST00000600442 ABCC3O15438 1527 aa18.07■□□□□ 0.48
ZNF548-210ENST00000600442 ARHGAP31Q2M1Z3 1444 aa18.06■□□□□ 0.48
ZNF548-210ENST00000600442 ZC3H13Q5T200 1668 aaKnown RBP18.06■□□□□ 0.48
ZNF548-210ENST00000600442 TRPM2O94759 1503 aa18.06■□□□□ 0.48
ZNF548-210ENST00000600442 E9PCH4 1651 aa18.03■□□□□ 0.48
ZNF548-210ENST00000600442 DCAF11Q8TEB1 546 aa18.03■□□□□ 0.48
ZNF548-210ENST00000600442 PHF23Q9BUL5 403 aaPredicted RBP18.03■□□□□ 0.48
ZNF548-210ENST00000600442 SENP3Q9H4L4 574 aaPredicted RBP18.03■□□□□ 0.48
ZNF548-210ENST00000600442 LRRC7Q96NW7 1537 aa18.03■□□□□ 0.48
ZNF548-210ENST00000600442 RGL3Q3MIN7 710 aa18.02■□□□□ 0.48
ZNF548-210ENST00000600442 SLC52A1Q9NWF4 448 aa18.02■□□□□ 0.48
ZNF548-210ENST00000600442 CEP152O94986 1710 aa18.01■□□□□ 0.47
ZNF548-210ENST00000600442 ERVK-7P63135 1459 aa18.01■□□□□ 0.47
ZNF548-210ENST00000600442 UBR1Q8IWV7 1749 aa18.01■□□□□ 0.47
ZNF548-210ENST00000600442 SPHKAPQ2M3C7 1700 aa17.99■□□□□ 0.47
ZNF548-210ENST00000600442 ZNF326Q5BKZ1 582 aaKnown RBP17.99■□□□□ 0.47
ZNF548-210ENST00000600442 KDM2AQ9Y2K7 1162 aa17.99■□□□□ 0.47
ZNF548-210ENST00000600442 SYNMO15061 1565 aa17.99■□□□□ 0.47
ZNF548-210ENST00000600442 EIF4G2P78344 907 aaKnown RBP eCLIP17.97■□□□□ 0.47
ZNF548-210ENST00000600442 XIRP1Q702N8 1843 aaKnown RBP17.95■□□□□ 0.46
ZNF548-210ENST00000600442 CHGAP10645 457 aaKnown RBP17.95■□□□□ 0.46
ZNF548-210ENST00000600442 LTKP29376 864 aa17.95■□□□□ 0.46
ZNF548-210ENST00000600442 TXNDC2Q86VQ3 553 aa17.95■□□□□ 0.46
ZNF548-210ENST00000600442 RPGRIP1LQ68CZ1 1315 aa17.95■□□□□ 0.46
ZNF548-210ENST00000600442 SCAF11Q99590 1463 aaKnown RBP17.95■□□□□ 0.46
ZNF548-210ENST00000600442 NOS1P29475 1434 aa17.94■□□□□ 0.46
ZNF548-210ENST00000600442 SPATA31E1Q6ZUB1 1445 aa17.94■□□□□ 0.46
ZNF548-210ENST00000600442 STAG3Q9UJ98 1225 aa17.92■□□□□ 0.46
ZNF548-210ENST00000600442 ARHGAP23Q9P227 1491 aa17.92■□□□□ 0.46
ZNF548-210ENST00000600442 NBPF8Q3BBV2 869 aa17.91■□□□□ 0.46
ZNF548-210ENST00000600442 SLIT1O75093 1534 aa17.91■□□□□ 0.46
ZNF548-210ENST00000600442 CLTCL1P53675 1640 aa17.9■□□□□ 0.46
ZNF548-210ENST00000600442 DIEXFQ68CQ4 756 aaKnown RBP17.89■□□□□ 0.45
ZNF548-210ENST00000600442 CARD11Q9BXL7 1154 aa17.89■□□□□ 0.45
ZNF548-210ENST00000600442 RGS17Q9UGC6 210 aaPredicted RBP17.89■□□□□ 0.45
ZNF548-210ENST00000600442 EID1Q9Y6B2 187 aa17.89■□□□□ 0.45
ZNF548-210ENST00000600442 PIK3C2BO00750 1634 aa17.88■□□□□ 0.45
ZNF548-210ENST00000600442 ROCK2O75116 1388 aaKnown RBP17.88■□□□□ 0.45
ZNF548-210ENST00000600442 PRAG1Q86YV5 1406 aa17.88■□□□□ 0.45
ZNF548-210ENST00000600442 RALGAPBQ86X10 1494 aa17.88■□□□□ 0.45
ZNF548-210ENST00000600442 VGFO15240 615 aaPredicted RBP17.87■□□□□ 0.45
ZNF548-210ENST00000600442 HDGFP51858 240 aaKnown RBP17.87■□□□□ 0.45
ZNF548-210ENST00000600442 IDI1Q13907 227 aa17.86■□□□□ 0.45
ZNF548-210ENST00000600442 KIF1BO60333 1816 aa17.85■□□□□ 0.45
ZNF548-210ENST00000600442 TMEM2Q9UHN6 1383 aa17.84■□□□□ 0.45
ZNF548-210ENST00000600442 HSPA5P11021 654 aaKnown RBP17.84■□□□□ 0.45
ZNF548-210ENST00000600442 ADGRB3O60242 1522 aa17.82■□□□□ 0.44
ZNF548-210ENST00000600442 MYOM2P54296 1465 aa17.82■□□□□ 0.44
ZNF548-210ENST00000600442 FAM135BQ49AJ0 1406 aa17.82■□□□□ 0.44
ZNF548-210ENST00000600442 SLC24A1O60721 1099 aa17.82■□□□□ 0.44
ZNF548-210ENST00000600442 USP47Q96K76 1375 aa17.81■□□□□ 0.44
ZNF548-210ENST00000600442 KDM5AP29375 1690 aaKnown RBP17.81■□□□□ 0.44
ZNF548-210ENST00000600442 TMEM94Q12767 1356 aa17.8■□□□□ 0.44
ZNF548-210ENST00000600442 KCNA6P17658 529 aa17.8■□□□□ 0.44
ZNF548-210ENST00000600442 SLC26A8Q96RN1 970 aa17.8■□□□□ 0.44
ZNF548-210ENST00000600442 PROSER2Q86WR7 435 aaPredicted RBP17.79■□□□□ 0.44
ZNF548-210ENST00000600442 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.79■□□□□ 0.44
ZNF548-210ENST00000600442 RBM33Q96EV2 1170 aaKnown RBP17.79■□□□□ 0.44
ZNF548-210ENST00000600442 ROBO1Q9Y6N7 1651 aa17.78■□□□□ 0.44
ZNF548-210ENST00000600442 GPRASP1Q5JY77 1395 aa17.78■□□□□ 0.44
ZNF548-210ENST00000600442 EIF3AQ14152 1382 aaKnown RBP17.77■□□□□ 0.43
ZNF548-210ENST00000600442 POTEAQ6S8J7 498 aa17.76■□□□□ 0.43
ZNF548-210ENST00000600442 ZFYVE9O95405 1425 aa17.75■□□□□ 0.43
ZNF548-210ENST00000600442 HIRIP3Q9BW71 556 aaPredicted RBP17.75■□□□□ 0.43
ZNF548-210ENST00000600442 BCANQ96GW7 911 aa17.73■□□□□ 0.43
ZNF548-210ENST00000600442 ADGRF5Q8IZF2 1346 aa17.72■□□□□ 0.43
ZNF548-210ENST00000600442 TRPM1Q7Z4N2 1603 aa17.72■□□□□ 0.43
ZNF548-210ENST00000600442 MYO5BQ9ULV0 1848 aa17.72■□□□□ 0.43
ZNF548-210ENST00000600442 LAMC1P11047 1609 aa17.72■□□□□ 0.43
ZNF548-210ENST00000600442 NRXN1Q9ULB1 1477 aa17.71■□□□□ 0.43
ZNF548-210ENST00000600442 NBPF1Q3BBV0 1214 aa17.71■□□□□ 0.43
ZNF548-210ENST00000600442 C14orf93Q9H972 538 aaKnown RBP17.71■□□□□ 0.43
ZNF548-210ENST00000600442 CHD2O14647 1828 aaKnown RBP17.7■□□□□ 0.42
ZNF548-210ENST00000600442 TMEM131LA2VDJ0 1609 aa17.7■□□□□ 0.42
ZNF548-210ENST00000600442 ST20-MTHFSA0A0A6YYL1 179 aa17.7■□□□□ 0.42
ZNF548-210ENST00000600442 CDCA8Q53HL2 280 aa17.7■□□□□ 0.42
ZNF548-210ENST00000600442 NWD1Q149M9 1564 aa17.7■□□□□ 0.42
ZNF548-210ENST00000600442 NKTRP30414 1462 aaKnown RBP17.69■□□□□ 0.42
ZNF548-210ENST00000600442 CFAP70Q5T0N1 1121 aa17.69■□□□□ 0.42
ZNF548-210ENST00000600442 SLAIN2Q9P270 581 aa17.69■□□□□ 0.42
ZNF548-210ENST00000600442 PHLPP1O60346 1717 aa17.69■□□□□ 0.42
ZNF548-210ENST00000600442 KIAA1210Q9ULL0 1709 aa17.69■□□□□ 0.42
ZNF548-210ENST00000600442 MSH6P52701 1360 aa17.68■□□□□ 0.42
ZNF548-210ENST00000600442 PIK3C2GO75747 1445 aa17.68■□□□□ 0.42
ZNF548-210ENST00000600442 DDX10Q13206 875 aaKnown RBP17.68■□□□□ 0.42
ZNF548-210ENST00000600442 TMF1P82094 1093 aa17.67■□□□□ 0.42
ZNF548-210ENST00000600442 RIMS2Q9UQ26 1411 aa17.66■□□□□ 0.42
ZNF548-210ENST00000600442 NEXMIFQ5QGS0 1516 aa17.66■□□□□ 0.42
ZNF548-210ENST00000600442 IFT172Q9UG01 1749 aa17.65■□□□□ 0.42
ZNF548-210ENST00000600442 PPLO60437 1756 aa17.65■□□□□ 0.42
ZNF548-210ENST00000600442 CCDC7Q96M83 1385 aa17.65■□□□□ 0.42
ZNF548-210ENST00000600442 SETD1AO15047 1707 aaKnown RBP17.64■□□□□ 0.41
ZNF548-210ENST00000600442 SETBP1Q9Y6X0 1596 aa17.63■□□□□ 0.41
ZNF548-210ENST00000600442 NUTM2DQ5VT03 806 aaPredicted RBP17.63■□□□□ 0.41
ZNF548-210ENST00000600442 WASHC2AQ641Q2 1341 aa17.63■□□□□ 0.41
ZNF548-210ENST00000600442 JCADQ9P266 1359 aa17.63■□□□□ 0.41
ZNF548-210ENST00000600442 PLEKHG1Q9ULL1 1385 aa17.63■□□□□ 0.41
ZNF548-210ENST00000600442 ANP32CO43423 234 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms