RNA–Protein interactions for RNA: ENST00000597518.1

LINC00347-205, long intergenic non-protein coding RNA 347, humanhuman

TSL 5 BASIC

Gene LINC00347, Length 868 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-205ENST00000597518 SMARCA4P51532 1647 aa8.33□□□□□ -1.08
LINC00347-205ENST00000597518 PRSS12P56730 875 aa8.33□□□□□ -1.08
LINC00347-205ENST00000597518 MDM2Q00987 491 aaPredicted RBP8.33□□□□□ -1.08
LINC00347-205ENST00000597518 CYB5RLQ6IPT4 315 aa8.33□□□□□ -1.08
LINC00347-205ENST00000597518 GIGYF2Q6Y7W6 1299 aaKnown RBP8.33□□□□□ -1.08
LINC00347-205ENST00000597518 CDCA7LQ96GN5 454 aa8.33□□□□□ -1.08
LINC00347-205ENST00000597518 TMUB1Q9BVT8 246 aa8.33□□□□□ -1.08
LINC00347-205ENST00000597518 TSKSQ9UJT2 592 aa8.33□□□□□ -1.08
LINC00347-205ENST00000597518 WDR62O43379 1518 aa8.33□□□□□ -1.08
LINC00347-205ENST00000597518 METTL3Q86U44 580 aaKnown RBP8.32□□□□□ -1.08
LINC00347-205ENST00000597518 TIMELESSQ9UNS1 1208 aa8.32□□□□□ -1.08
LINC00347-205ENST00000597518 PROX2Q3B8N5 592 aa8.31□□□□□ -1.08
LINC00347-205ENST00000597518 PXYLP1Q8TE99 480 aa8.31□□□□□ -1.08
LINC00347-205ENST00000597518 KCNH8Q96L42 1107 aa8.31□□□□□ -1.08
LINC00347-205ENST00000597518 PSEN2P49810 448 aa8.3□□□□□ -1.08
LINC00347-205ENST00000597518 KCNK17Q96T54 332 aa8.3□□□□□ -1.08
LINC00347-205ENST00000597518 ARHGEF11O15085 1522 aa8.29□□□□□ -1.08
LINC00347-205ENST00000597518 PPP1R3GB7ZBB8 358 aa8.29□□□□□ -1.08
LINC00347-205ENST00000597518 HRO43593 1189 aa8.29□□□□□ -1.08
LINC00347-205ENST00000597518 PTPREP23469 700 aa8.29□□□□□ -1.08
LINC00347-205ENST00000597518 CERKQ8TCT0 537 aa8.29□□□□□ -1.08
LINC00347-205ENST00000597518 CADPSQ9ULU8 1353 aa8.29□□□□□ -1.08
LINC00347-205ENST00000597518 RBM27Q9P2N5 1060 aaKnown RBP8.28□□□□□ -1.08
LINC00347-205ENST00000597518 CEP164Q9UPV0 1460 aa8.27□□□□□ -1.09
LINC00347-205ENST00000597518 SMAPO00193 183 aa8.27□□□□□ -1.09
LINC00347-205ENST00000597518 EYA1Q99502 592 aa8.27□□□□□ -1.09
LINC00347-205ENST00000597518 RGS20O76081 388 aa8.26□□□□□ -1.09
LINC00347-205ENST00000597518 DMRTA1Q5VZB9 504 aa8.26□□□□□ -1.09
LINC00347-205ENST00000597518 NUDT18Q6ZVK8 323 aa8.26□□□□□ -1.09
LINC00347-205ENST00000597518 GPCPD1Q9NPB8 672 aa8.26□□□□□ -1.09
LINC00347-205ENST00000597518 TRIM6-TRIM34B2RNG4 842 aa8.25□□□□□ -1.09
LINC00347-205ENST00000597518 OATP04181 439 aa8.25□□□□□ -1.09
LINC00347-205ENST00000597518 KCTD12Q96CX2 325 aaKnown RBP8.25□□□□□ -1.09
LINC00347-205ENST00000597518 SSTR3P32745 418 aaPredicted RBP8.24□□□□□ -1.09
LINC00347-205ENST00000597518 CLCN1P35523 988 aa8.24□□□□□ -1.09
LINC00347-205ENST00000597518 ZBED2Q9BTP6 218 aa8.24□□□□□ -1.09
LINC00347-205ENST00000597518 FAM217BQ9NTX9 383 aaPredicted RBP8.24□□□□□ -1.09
LINC00347-205ENST00000597518 RCCD1A6NED2 376 aa8.23□□□□□ -1.09
LINC00347-205ENST00000597518 TATDN2Q93075 761 aa8.23□□□□□ -1.09
LINC00347-205ENST00000597518 PNMA3Q9UL41 463 aa8.23□□□□□ -1.09
LINC00347-205ENST00000597518 PEG3Q9GZU2 1588 aa8.22□□□□□ -1.09
LINC00347-205ENST00000597518 RBM46Q8TBY0 533 aaKnown RBP8.22□□□□□ -1.09
LINC00347-205ENST00000597518 DDRGK1Q96HY6 314 aa8.22□□□□□ -1.09
LINC00347-205ENST00000597518 IFFO2Q5TF58 517 aa8.21□□□□□ -1.1
LINC00347-205ENST00000597518 KIAA1468Q9P260 1216 aa8.21□□□□□ -1.1
LINC00347-205ENST00000597518 FANCD2Q9BXW9 1451 aa8.2□□□□□ -1.1
LINC00347-205ENST00000597518 BEGAINQ9BUH8 593 aa8.2□□□□□ -1.1
LINC00347-205ENST00000597518 SEPT9Q9UHD8 586 aaPredicted RBP8.19□□□□□ -1.1
LINC00347-205ENST00000597518 NBPF26B4DH59 902 aa8.18□□□□□ -1.1
LINC00347-205ENST00000597518 PACS2Q86VP3 889 aa8.18□□□□□ -1.1
LINC00347-205ENST00000597518 SLC4A5Q9BY07 1137 aa8.18□□□□□ -1.1
LINC00347-205ENST00000597518 VPS9D1Q9Y2B5 631 aa8.18□□□□□ -1.1
LINC00347-205ENST00000597518 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.17□□□□□ -1.1
LINC00347-205ENST00000597518 PTPN5P54829 565 aa8.17□□□□□ -1.1
LINC00347-205ENST00000597518 TMEM134Q9H6X4 195 aa8.16□□□□□ -1.1
LINC00347-205ENST00000597518 DAXXQ9UER7 740 aaPredicted RBP8.16□□□□□ -1.1
LINC00347-205ENST00000597518 ARAP1Q96P48 1450 aa8.15□□□□□ -1.1
LINC00347-205ENST00000597518 ONECUT3O60422 494 aaPredicted RBP8.15□□□□□ -1.1
LINC00347-205ENST00000597518 DNAJB2P25686 324 aa8.15□□□□□ -1.1
LINC00347-205ENST00000597518 FBXO31Q5XUX0 539 aaPredicted RBP8.15□□□□□ -1.1
LINC00347-205ENST00000597518 PROCA1Q8NCQ7 364 aaPredicted RBP8.15□□□□□ -1.1
LINC00347-205ENST00000597518 GOLGA8CPA6NN73 597 aa8.14□□□□□ -1.11
LINC00347-205ENST00000597518 DDX11L8A8MPP1 907 aa8.14□□□□□ -1.11
LINC00347-205ENST00000597518 CD46P15529 392 aa8.14□□□□□ -1.11
LINC00347-205ENST00000597518 C14orf37Q86TY3 774 aa8.14□□□□□ -1.11
LINC00347-205ENST00000597518 IRX2Q9BZI1 471 aaPredicted RBP8.14□□□□□ -1.11
LINC00347-205ENST00000597518 POLR3EQ9NVU0 708 aa8.14□□□□□ -1.11
LINC00347-205ENST00000597518 SH3D19Q5HYK7 790 aa8.13□□□□□ -1.11
LINC00347-205ENST00000597518 SWT1Q5T5J6 900 aaKnown RBP8.13□□□□□ -1.11
LINC00347-205ENST00000597518 MYSM1Q5VVJ2 828 aa8.13□□□□□ -1.11
LINC00347-205ENST00000597518 RABGEF1Q9UJ41 708 aa8.13□□□□□ -1.11
LINC00347-205ENST00000597518 RSF1Q96T23 1441 aaPredicted RBP8.12□□□□□ -1.11
LINC00347-205ENST00000597518 TBC1D2Q9BYX2 928 aa8.12□□□□□ -1.11
LINC00347-205ENST00000597518 IFT140Q96RY7 1462 aa8.12□□□□□ -1.11
LINC00347-205ENST00000597518 THSD4Q6ZMP0 1018 aa8.11□□□□□ -1.11
LINC00347-205ENST00000597518 SPIRE2Q8WWL2 714 aa8.11□□□□□ -1.11
LINC00347-205ENST00000597518 URB2Q14146 1524 aaKnown RBP8.11□□□□□ -1.11
LINC00347-205ENST00000597518 MROH2BQ7Z745 1585 aa8.1□□□□□ -1.11
LINC00347-205ENST00000597518 A0A0G2JS52 829 aa8.1□□□□□ -1.11
LINC00347-205ENST00000597518 BHMG1C9JSJ3 638 aaPredicted RBP8.1□□□□□ -1.11
LINC00347-205ENST00000597518 SLC10A3P09131 477 aa8.1□□□□□ -1.11
LINC00347-205ENST00000597518 SKIV2LQ15477 1246 aaKnown RBP8.1□□□□□ -1.11
LINC00347-205ENST00000597518 MRPL50Q8N5N7 158 aaKnown RBP8.1□□□□□ -1.11
LINC00347-205ENST00000597518 GOPCQ9HD26 462 aa8.1□□□□□ -1.11
LINC00347-205ENST00000597518 LIMD1Q9UGP4 676 aa8.1□□□□□ -1.11
LINC00347-205ENST00000597518 WNT2BQ93097 391 aa8.09□□□□□ -1.11
LINC00347-205ENST00000597518 PCMTD1Q96MG8 357 aaPredicted RBP8.09□□□□□ -1.11
LINC00347-205ENST00000597518 NBPF3Q9H094 633 aa8.09□□□□□ -1.11
LINC00347-205ENST00000597518 ZNF608Q9ULD9 1512 aaPredicted RBP8.08□□□□□ -1.12
LINC00347-205ENST00000597518 NDUFV2P19404 249 aa8.08□□□□□ -1.12
LINC00347-205ENST00000597518 RDH13Q8NBN7 331 aa8.08□□□□□ -1.12
LINC00347-205ENST00000597518 CFTRP13569 1480 aa8.07□□□□□ -1.12
LINC00347-205ENST00000597518 CHD1O14646 1710 aa8.07□□□□□ -1.12
LINC00347-205ENST00000597518 MOXD2PA6NHM9 499 aa8.07□□□□□ -1.12
LINC00347-205ENST00000597518 SAMD7Q7Z3H4 446 aa8.07□□□□□ -1.12
LINC00347-205ENST00000597518 HLA-CQ95604 372 aa8.07□□□□□ -1.12
LINC00347-205ENST00000597518 CLK2P49760 499 aaKnown RBP8.06□□□□□ -1.12
LINC00347-205ENST00000597518 FAM98CQ17RN3 349 aaKnown RBP8.06□□□□□ -1.12
LINC00347-205ENST00000597518 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.06□□□□□ -1.12
LINC00347-205ENST00000597518 GUCA2AQ02747 115 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms