RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 XIRP1Q702N8 1843 aaKnown RBP33.52■■■□□ 2.96
GTF2F1-204ENST00000594965 SLC26A8Q96RN1 970 aa33.51■■■□□ 2.95
GTF2F1-204ENST00000594965 PLEKHG1Q9ULL1 1385 aa33.5■■■□□ 2.95
GTF2F1-204ENST00000594965 UBAP1LF5GYI3 381 aa33.5■■■□□ 2.95
GTF2F1-204ENST00000594965 KIF1BO60333 1816 aa33.49■■■□□ 2.95
GTF2F1-204ENST00000594965 HDGFP51858 240 aaKnown RBP33.48■■■□□ 2.95
GTF2F1-204ENST00000594965 SLC4A1APQ9BWU0 796 aaKnown RBP33.47■■■□□ 2.95
GTF2F1-204ENST00000594965 NUTM2DQ5VT03 806 aaPredicted RBP33.45■■■□□ 2.95
GTF2F1-204ENST00000594965 SENP3Q9H4L4 574 aaPredicted RBP33.45■■■□□ 2.95
GTF2F1-204ENST00000594965 ALKQ9UM73 1620 aa33.45■■■□□ 2.95
GTF2F1-204ENST00000594965 PPP1R15AO75807 674 aaPredicted RBP33.44■■■□□ 2.94
GTF2F1-204ENST00000594965 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.44■■■□□ 2.94
GTF2F1-204ENST00000594965 CHD2O14647 1828 aaKnown RBP33.44■■■□□ 2.94
GTF2F1-204ENST00000594965 NWD1Q149M9 1564 aa33.43■■■□□ 2.94
GTF2F1-204ENST00000594965 SETD5Q9C0A6 1442 aa33.42■■■□□ 2.94
GTF2F1-204ENST00000594965 BCANQ96GW7 911 aa33.41■■■□□ 2.94
GTF2F1-204ENST00000594965 KCNA6P17658 529 aa33.4■■■□□ 2.94
GTF2F1-204ENST00000594965 ADAMTS13Q76LX8 1427 aa33.39■■■□□ 2.94
GTF2F1-204ENST00000594965 NRXN3Q9Y4C0 1643 aa33.36■■■□□ 2.93
GTF2F1-204ENST00000594965 FOXD1Q16676 465 aa33.36■■■□□ 2.93
GTF2F1-204ENST00000594965 NEXMIFQ5QGS0 1516 aa33.36■■■□□ 2.93
GTF2F1-204ENST00000594965 TOM1O60784 492 aa33.35■■■□□ 2.93
GTF2F1-204ENST00000594965 TBX22Q9Y458 520 aa33.35■■■□□ 2.93
GTF2F1-204ENST00000594965 DIP2AQ14689 1571 aa33.34■■■□□ 2.93
GTF2F1-204ENST00000594965 MPHOSPH9Q99550 1183 aa33.34■■■□□ 2.93
GTF2F1-204ENST00000594965 ZNF326Q5BKZ1 582 aaKnown RBP33.32■■■□□ 2.92
GTF2F1-204ENST00000594965 NKTRP30414 1462 aaKnown RBP33.31■■■□□ 2.92
GTF2F1-204ENST00000594965 RAB3GAP2Q9H2M9 1393 aa33.31■■■□□ 2.92
GTF2F1-204ENST00000594965 SETBP1Q9Y6X0 1596 aa33.3■■■□□ 2.92
GTF2F1-204ENST00000594965 PIP4K2BP78356 416 aa33.28■■■□□ 2.92
GTF2F1-204ENST00000594965 TMEM94Q12767 1356 aa33.28■■■□□ 2.92
GTF2F1-204ENST00000594965 ACIN1Q9UKV3 1341 aaKnown RBP33.26■■■□□ 2.91
GTF2F1-204ENST00000594965 PPLO60437 1756 aa33.25■■■□□ 2.91
GTF2F1-204ENST00000594965 PROSER2Q86WR7 435 aaPredicted RBP33.25■■■□□ 2.91
GTF2F1-204ENST00000594965 RBM33Q96EV2 1170 aaKnown RBP33.24■■■□□ 2.91
GTF2F1-204ENST00000594965 SCAF1Q9H7N4 1312 aaKnown RBP33.23■■■□□ 2.91
GTF2F1-204ENST00000594965 PIK3R4Q99570 1358 aa33.22■■■□□ 2.91
GTF2F1-204ENST00000594965 PTPRUQ92729 1446 aa33.19■■■□□ 2.9
GTF2F1-204ENST00000594965 CCDC144AA2RUR9 1427 aa33.18■■■□□ 2.9
GTF2F1-204ENST00000594965 SETD1AO15047 1707 aaKnown RBP33.16■■■□□ 2.9
GTF2F1-204ENST00000594965 XRN1Q8IZH2 1706 aaKnown RBP33.16■■■□□ 2.9
GTF2F1-204ENST00000594965 HSPA1LP34931 641 aa33.15■■■□□ 2.9
GTF2F1-204ENST00000594965 RPGRIP1LQ68CZ1 1315 aa33.15■■■□□ 2.9
GTF2F1-204ENST00000594965 IFT172Q9UG01 1749 aa33.14■■■□□ 2.9
GTF2F1-204ENST00000594965 SPATA31E1Q6ZUB1 1445 aa33.14■■■□□ 2.9
GTF2F1-204ENST00000594965 METP08581 1390 aa33.12■■■□□ 2.89
GTF2F1-204ENST00000594965 AMOTL2Q9Y2J4 779 aa33.11■■■□□ 2.89
GTF2F1-204ENST00000594965 VGFO15240 615 aaPredicted RBP33.1■■■□□ 2.89
GTF2F1-204ENST00000594965 HRCP23327 699 aa33.08■■■□□ 2.89
GTF2F1-204ENST00000594965 NCOA3Q9Y6Q9 1424 aa33.08■■■□□ 2.89
GTF2F1-204ENST00000594965 MSH6P52701 1360 aa33.07■■■□□ 2.88
GTF2F1-204ENST00000594965 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.05■■■□□ 2.88
GTF2F1-204ENST00000594965 RGL3Q3MIN7 710 aa33.04■■■□□ 2.88
GTF2F1-204ENST00000594965 ROBO1Q9Y6N7 1651 aa33.03■■■□□ 2.88
GTF2F1-204ENST00000594965 FAM135BQ49AJ0 1406 aa33.02■■■□□ 2.88
GTF2F1-204ENST00000594965 ADGRF5Q8IZF2 1346 aa32.99■■■□□ 2.87
GTF2F1-204ENST00000594965 ANKRD30BQ9BXX2 1392 aa32.97■■■□□ 2.87
GTF2F1-204ENST00000594965 C14orf37Q86TY3 774 aa32.94■■■□□ 2.86
GTF2F1-204ENST00000594965 C19orf44Q9H6X5 657 aa32.94■■■□□ 2.86
GTF2F1-204ENST00000594965 SLAIN2Q9P270 581 aa32.93■■■□□ 2.86
GTF2F1-204ENST00000594965 NALCNQ8IZF0 1738 aa32.91■■■□□ 2.86
GTF2F1-204ENST00000594965 DISP3Q9P2K9 1392 aa32.9■■■□□ 2.86
GTF2F1-204ENST00000594965 PRAG1Q86YV5 1406 aa32.89■■■□□ 2.86
GTF2F1-204ENST00000594965 PIK3C2GO75747 1445 aa32.88■■■□□ 2.85
GTF2F1-204ENST00000594965 PTCH1Q13635 1447 aa32.87■■■□□ 2.85
GTF2F1-204ENST00000594965 CADPS2Q86UW7 1296 aa32.86■■■□□ 2.85
GTF2F1-204ENST00000594965 ASXL1Q8IXJ9 1541 aa32.86■■■□□ 2.85
GTF2F1-204ENST00000594965 ROBO2Q9HCK4 1378 aa32.85■■■□□ 2.85
GTF2F1-204ENST00000594965 NRXN1Q9ULB1 1477 aa32.85■■■□□ 2.85
GTF2F1-204ENST00000594965 DCCP43146 1447 aa32.85■■■□□ 2.85
GTF2F1-204ENST00000594965 MED1Q15648 1581 aaPredicted RBP32.84■■■□□ 2.85
GTF2F1-204ENST00000594965 ATF3P18847 181 aa32.84■■■□□ 2.85
GTF2F1-204ENST00000594965 MYOM2P54296 1465 aa32.84■■■□□ 2.85
GTF2F1-204ENST00000594965 ADGRL3Q9HAR2 1447 aa32.84■■■□□ 2.85
GTF2F1-204ENST00000594965 PHLPP1O60346 1717 aa32.82■■■□□ 2.85
GTF2F1-204ENST00000594965 KNDC1Q76NI1 1749 aa32.79■■■□□ 2.84
GTF2F1-204ENST00000594965 MST1RQ04912 1400 aa32.77■■■□□ 2.84
GTF2F1-204ENST00000594965 LAMC1P11047 1609 aa32.76■■■□□ 2.83
GTF2F1-204ENST00000594965 TMEM132EQ6IEE7 984 aa32.75■■■□□ 2.83
GTF2F1-204ENST00000594965 TECPR2O15040 1411 aa32.75■■■□□ 2.83
GTF2F1-204ENST00000594965 COL16A1Q07092 1604 aaPredicted RBP32.74■■■□□ 2.83
GTF2F1-204ENST00000594965 C14orf93Q9H972 538 aaKnown RBP32.74■■■□□ 2.83
GTF2F1-204ENST00000594965 LRPPRCP42704 1394 aaKnown RBP32.73■■■□□ 2.83
GTF2F1-204ENST00000594965 AHDC1Q5TGY3 1603 aaPredicted RBP32.73■■■□□ 2.83
GTF2F1-204ENST00000594965 CFAP70Q5T0N1 1121 aa32.7■■■□□ 2.83
GTF2F1-204ENST00000594965 ABCC11Q96J66 1382 aa32.7■■■□□ 2.82
GTF2F1-204ENST00000594965 ILDR2Q71H61 639 aa32.69■■■□□ 2.82
GTF2F1-204ENST00000594965 BRINP3Q76B58 766 aa32.69■■■□□ 2.82
GTF2F1-204ENST00000594965 STK26Q9P289 416 aa32.69■■■□□ 2.82
GTF2F1-204ENST00000594965 YTHDC2Q9H6S0 1430 aaKnown RBP32.68■■■□□ 2.82
GTF2F1-204ENST00000594965 DHX57Q6P158 1386 aaKnown RBP32.68■■■□□ 2.82
GTF2F1-204ENST00000594965 NHSL1Q5SYE7 1610 aa32.66■■■□□ 2.82
GTF2F1-204ENST00000594965 WAPLQ7Z5K2 1190 aa32.64■■■□□ 2.82
GTF2F1-204ENST00000594965 DCAF11Q8TEB1 546 aa32.64■■■□□ 2.82
GTF2F1-204ENST00000594965 C1orf167Q5SNV9 1468 aa32.63■■■□□ 2.81
GTF2F1-204ENST00000594965 PLEKHH1Q9ULM0 1364 aa32.63■■■□□ 2.81
GTF2F1-204ENST00000594965 KDM2AQ9Y2K7 1162 aa32.63■■■□□ 2.81
GTF2F1-204ENST00000594965 CDC42BPGQ6DT37 1551 aa32.62■■■□□ 2.81
GTF2F1-204ENST00000594965 ADGRB1O14514 1584 aa32.61■■■□□ 2.81
GTF2F1-204ENST00000594965 JCADQ9P266 1359 aa32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms