RNA–Protein interactions for RNA: ENST00000593504.5

SYMPK-202, Transcript of symplekin, humanhuman

TSL 2

Gene SYMPK, Length 5,107 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-202ENST00000593504 KIAA0556O60303 1618 aa19.25■□□□□ 0.67
SYMPK-202ENST00000593504 RUNDC1Q96C34 613 aa19.25■□□□□ 0.67
SYMPK-202ENST00000593504 LTV1Q96GA3 475 aaPredicted RBP19.25■□□□□ 0.67
SYMPK-202ENST00000593504 GGNBP2Q9H3C7 697 aa19.25■□□□□ 0.67
SYMPK-202ENST00000593504 STK31Q9BXU1 1019 aa19.24■□□□□ 0.67
SYMPK-202ENST00000593504 CENPQQ7L2Z9 268 aaPredicted RBP19.23■□□□□ 0.67
SYMPK-202ENST00000593504 WDR62O43379 1518 aa19.23■□□□□ 0.67
SYMPK-202ENST00000593504 HSCBQ8IWL3 235 aa19.23■□□□□ 0.67
SYMPK-202ENST00000593504 CSB-PGBD3P0DP91 1061 aa19.22■□□□□ 0.67
SYMPK-202ENST00000593504 PNISRQ8TF01 805 aaKnown RBP19.22■□□□□ 0.67
SYMPK-202ENST00000593504 ADGRL1O94910 1474 aa19.22■□□□□ 0.67
SYMPK-202ENST00000593504 NCLP19338 710 aaKnown RBP19.21■□□□□ 0.67
SYMPK-202ENST00000593504 ELL2O00472 640 aaPredicted RBP19.21■□□□□ 0.67
SYMPK-202ENST00000593504 CD109Q6YHK3 1445 aa19.21■□□□□ 0.67
SYMPK-202ENST00000593504 COG6Q9Y2V7 657 aa19.2■□□□□ 0.66
SYMPK-202ENST00000593504 ZKSCAN2Q63HK3 967 aa19.2■□□□□ 0.66
SYMPK-202ENST00000593504 SLC52A1Q9NWF4 448 aa19.2■□□□□ 0.66
SYMPK-202ENST00000593504 MTHFSP49914 203 aa19.19■□□□□ 0.66
SYMPK-202ENST00000593504 CDCA7LQ96GN5 454 aa19.19■□□□□ 0.66
SYMPK-202ENST00000593504 EIF4G3O43432 1585 aaKnown RBP19.19■□□□□ 0.66
SYMPK-202ENST00000593504 TCOF1Q13428 1488 aaKnown RBP19.19■□□□□ 0.66
SYMPK-202ENST00000593504 RIPK4P57078 832 aa19.19■□□□□ 0.66
SYMPK-202ENST00000593504 SLC12A5Q9H2X9 1139 aa19.19■□□□□ 0.66
SYMPK-202ENST00000593504 ABCA5Q8WWZ7 1642 aa19.18■□□□□ 0.66
SYMPK-202ENST00000593504 IPO9Q96P70 1041 aaKnown RBP19.18■□□□□ 0.66
SYMPK-202ENST00000593504 SPRYD3Q8NCJ5 442 aa19.18■□□□□ 0.66
SYMPK-202ENST00000593504 PRAM1Q96QH2 718 aa19.18■□□□□ 0.66
SYMPK-202ENST00000593504 ITSN2Q9NZM3 1697 aa19.18■□□□□ 0.66
SYMPK-202ENST00000593504 CFAP44Q96MT7 982 aa19.17■□□□□ 0.66
SYMPK-202ENST00000593504 RPGRIP1LQ68CZ1 1315 aa19.17■□□□□ 0.66
SYMPK-202ENST00000593504 SLC4A10Q6U841 1118 aa19.16■□□□□ 0.66
SYMPK-202ENST00000593504 PBRM1Q86U86 1689 aa19.15■□□□□ 0.66
SYMPK-202ENST00000593504 PDE4AP27815 886 aa19.15■□□□□ 0.66
SYMPK-202ENST00000593504 CHMP4AQ9BY43 222 aa19.15■□□□□ 0.66
SYMPK-202ENST00000593504 FANCAO15360 1455 aa19.13■□□□□ 0.65
SYMPK-202ENST00000593504 KCNJ4P48050 445 aa19.13■□□□□ 0.65
SYMPK-202ENST00000593504 MFAP1P55081 439 aaKnown RBP19.12■□□□□ 0.65
SYMPK-202ENST00000593504 HMOX1P09601 288 aa19.11■□□□□ 0.65
SYMPK-202ENST00000593504 TCP11L2Q8N4U5 519 aa19.11■□□□□ 0.65
SYMPK-202ENST00000593504 HMMRO75330 724 aa19.11■□□□□ 0.65
SYMPK-202ENST00000593504 MCCP23508 829 aa19.11■□□□□ 0.65
SYMPK-202ENST00000593504 DISP1Q96F81 1524 aa19.1■□□□□ 0.65
SYMPK-202ENST00000593504 FAM161AQ3B820 660 aa19.09■□□□□ 0.65
SYMPK-202ENST00000593504 PLCH2O75038 1416 aa19.09■□□□□ 0.65
SYMPK-202ENST00000593504 TPRNQ4KMQ1 711 aa19.08■□□□□ 0.65
SYMPK-202ENST00000593504 DZIP1LQ8IYY4 767 aaKnown RBP19.08■□□□□ 0.65
SYMPK-202ENST00000593504 TXNDC2Q86VQ3 553 aa19.08■□□□□ 0.64
SYMPK-202ENST00000593504 CDK19Q9BWU1 502 aa19.08■□□□□ 0.64
SYMPK-202ENST00000593504 SAMD9Q5K651 1589 aa19.07■□□□□ 0.64
SYMPK-202ENST00000593504 SLKQ9H2G2 1235 aaPredicted RBP19.07■□□□□ 0.64
SYMPK-202ENST00000593504 SYCP2Q9BX26 1530 aa19.07■□□□□ 0.64
SYMPK-202ENST00000593504 TRIM44Q96DX7 344 aaPredicted RBP19.06■□□□□ 0.64
SYMPK-202ENST00000593504 DDX19BQ9UMR2 479 aa19.06■□□□□ 0.64
SYMPK-202ENST00000593504 SMG6Q86US8 1419 aaKnown RBP19.06■□□□□ 0.64
SYMPK-202ENST00000593504 NUP160Q12769 1436 aa19.05■□□□□ 0.64
SYMPK-202ENST00000593504 CABP1Q9NZU7 370 aa19.05■□□□□ 0.64
SYMPK-202ENST00000593504 FAM135AQ9P2D6 1515 aa19.04■□□□□ 0.64
SYMPK-202ENST00000593504 ADGRF5Q8IZF2 1346 aa19.04■□□□□ 0.64
SYMPK-202ENST00000593504 DHX29Q7Z478 1369 aaKnown RBP19.04■□□□□ 0.64
SYMPK-202ENST00000593504 FGD1P98174 961 aa19.03■□□□□ 0.64
SYMPK-202ENST00000593504 PANK1Q8TE04 598 aa19.03■□□□□ 0.64
SYMPK-202ENST00000593504 GNAI1P63096 354 aa19.03■□□□□ 0.64
SYMPK-202ENST00000593504 PSME1Q06323 249 aa19.03■□□□□ 0.64
SYMPK-202ENST00000593504 ANKRD45Q5TZF3 282 aa19.02■□□□□ 0.64
SYMPK-202ENST00000593504 DEKP35659 375 aaKnown RBP19.02■□□□□ 0.63
SYMPK-202ENST00000593504 ZNF330Q9Y3S2 320 aaPredicted RBP19.02■□□□□ 0.63
SYMPK-202ENST00000593504 DUOX2Q9NRD8 1548 aa19.01■□□□□ 0.63
SYMPK-202ENST00000593504 KIAA1211Q6ZU35 1233 aa19■□□□□ 0.63
SYMPK-202ENST00000593504 TARBP1Q13395 1621 aaKnown RBP19■□□□□ 0.63
SYMPK-202ENST00000593504 NSD3Q9BZ95 1437 aa19■□□□□ 0.63
SYMPK-202ENST00000593504 KIF16BQ96L93 1317 aa19■□□□□ 0.63
SYMPK-202ENST00000593504 FANCIQ9NVI1 1328 aa19■□□□□ 0.63
SYMPK-202ENST00000593504 C1orf141Q5JVX7 400 aa19■□□□□ 0.63
SYMPK-202ENST00000593504 HDAC5Q9UQL6 1122 aa18.99■□□□□ 0.63
SYMPK-202ENST00000593504 API5Q9BZZ5 524 aaKnown RBP18.99■□□□□ 0.63
SYMPK-202ENST00000593504 TRIM6-TRIM34B2RNG4 842 aa18.99■□□□□ 0.63
SYMPK-202ENST00000593504 TEFQ10587 303 aa18.99■□□□□ 0.63
SYMPK-202ENST00000593504 PRKAR2BP31323 418 aa18.98■□□□□ 0.63
SYMPK-202ENST00000593504 DENND4BO75064 1496 aaPredicted RBP18.98■□□□□ 0.63
SYMPK-202ENST00000593504 NPHP1O15259 732 aa18.98■□□□□ 0.63
SYMPK-202ENST00000593504 DNMT1P26358 1616 aaKnown RBP18.98■□□□□ 0.63
SYMPK-202ENST00000593504 ATAD2Q6PL18 1390 aa18.98■□□□□ 0.63
SYMPK-202ENST00000593504 RTEL1-TNFRSF6BF6WH68 1400 aa18.98■□□□□ 0.63
SYMPK-202ENST00000593504 ASXL2Q76L83 1435 aa18.98■□□□□ 0.63
SYMPK-202ENST00000593504 NUTM2GQ5VZR2 741 aa18.98■□□□□ 0.63
SYMPK-202ENST00000593504 KDM5BQ9UGL1 1544 aa18.97■□□□□ 0.63
SYMPK-202ENST00000593504 NLRP6P59044 892 aa18.97■□□□□ 0.63
SYMPK-202ENST00000593504 SCAF11Q99590 1463 aaKnown RBP18.97■□□□□ 0.63
SYMPK-202ENST00000593504 RALGAPBQ86X10 1494 aa18.96■□□□□ 0.63
SYMPK-202ENST00000593504 DISP3Q9P2K9 1392 aa18.96■□□□□ 0.63
SYMPK-202ENST00000593504 NAP1L2Q9ULW6 460 aaPredicted RBP18.96■□□□□ 0.63
SYMPK-202ENST00000593504 SHANK2Q9UPX8 1470 aa18.96■□□□□ 0.63
SYMPK-202ENST00000593504 TRAPPC8Q9Y2L5 1435 aa18.96■□□□□ 0.63
SYMPK-202ENST00000593504 NOS1P29475 1434 aa18.95■□□□□ 0.62
SYMPK-202ENST00000593504 IDI1Q13907 227 aa18.95■□□□□ 0.62
SYMPK-202ENST00000593504 WDR7Q9Y4E6 1490 aa18.95■□□□□ 0.62
SYMPK-202ENST00000593504 THEMISQ8N1K5 641 aaPredicted RBP18.94■□□□□ 0.62
SYMPK-202ENST00000593504 EXOSC9Q06265 439 aaKnown RBP18.94■□□□□ 0.62
SYMPK-202ENST00000593504 BCAR3O75815 825 aa18.94■□□□□ 0.62
SYMPK-202ENST00000593504 AAMPQ13685 434 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms