RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 SLC26A8Q96RN1 970 aa20.38■□□□□ 0.85
H3F3B-213ENST00000593254 STAG3Q9UJ98 1225 aa20.38■□□□□ 0.85
H3F3B-213ENST00000593254 RBM33Q96EV2 1170 aaKnown RBP20.37■□□□□ 0.85
H3F3B-213ENST00000593254 PHLPP1O60346 1717 aa20.36■□□□□ 0.85
H3F3B-213ENST00000593254 KANK1Q14678 1352 aa20.35■□□□□ 0.85
H3F3B-213ENST00000593254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.35■□□□□ 0.85
H3F3B-213ENST00000593254 JCADQ9P266 1359 aa20.34■□□□□ 0.85
H3F3B-213ENST00000593254 ADGRB3O60242 1522 aa20.34■□□□□ 0.85
H3F3B-213ENST00000593254 NOS1P29475 1434 aa20.34■□□□□ 0.85
H3F3B-213ENST00000593254 MSH6P52701 1360 aa20.34■□□□□ 0.85
H3F3B-213ENST00000593254 SLAIN2Q9P270 581 aa20.33■□□□□ 0.85
H3F3B-213ENST00000593254 ANKRD50Q9ULJ7 1429 aa20.32■□□□□ 0.84
H3F3B-213ENST00000593254 CHD2O14647 1828 aaKnown RBP20.32■□□□□ 0.84
H3F3B-213ENST00000593254 COL16A1Q07092 1604 aaPredicted RBP20.31■□□□□ 0.84
H3F3B-213ENST00000593254 SLC52A1Q9NWF4 448 aa20.28■□□□□ 0.84
H3F3B-213ENST00000593254 ROCK1Q13464 1354 aa20.28■□□□□ 0.84
H3F3B-213ENST00000593254 ZFYVE9O95405 1425 aa20.27■□□□□ 0.84
H3F3B-213ENST00000593254 SRCAPQ6ZRS2 3230 aa20.27■□□□□ 0.84
H3F3B-213ENST00000593254 LRP6O75581 1613 aa20.27■□□□□ 0.83
H3F3B-213ENST00000593254 MYO5BQ9ULV0 1848 aa20.26■□□□□ 0.83
H3F3B-213ENST00000593254 PPARGC1BQ86YN6 1023 aaKnown RBP20.26■□□□□ 0.83
H3F3B-213ENST00000593254 UNC13BO14795 1591 aa20.25■□□□□ 0.83
H3F3B-213ENST00000593254 PLEKHG1Q9ULL1 1385 aa20.25■□□□□ 0.83
H3F3B-213ENST00000593254 NCOA3Q9Y6Q9 1424 aa20.24■□□□□ 0.83
H3F3B-213ENST00000593254 SPATA31A6Q5VVP1 1343 aa20.24■□□□□ 0.83
H3F3B-213ENST00000593254 UPF1Q92900 1129 aaKnown RBP eCLIP20.23■□□□□ 0.835e-6■□□□□ 10.5
H3F3B-213ENST00000593254 RPRD2Q5VT52 1461 aaKnown RBP20.23■□□□□ 0.83
H3F3B-213ENST00000593254 GCC2Q8IWJ2 1684 aa20.22■□□□□ 0.83
H3F3B-213ENST00000593254 AHDC1Q5TGY3 1603 aaPredicted RBP20.21■□□□□ 0.83
H3F3B-213ENST00000593254 BCANQ96GW7 911 aa20.21■□□□□ 0.83
H3F3B-213ENST00000593254 SHPRHQ149N8 1683 aa20.21■□□□□ 0.83
H3F3B-213ENST00000593254 ZNF772Q68DY9 489 aaPredicted RBP20.2■□□□□ 0.82
H3F3B-213ENST00000593254 TMEM131LA2VDJ0 1609 aa20.2■□□□□ 0.82
H3F3B-213ENST00000593254 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.19■□□□□ 0.82
H3F3B-213ENST00000593254 RRBP1Q9P2E9 1410 aaKnown RBP20.19■□□□□ 0.82
H3F3B-213ENST00000593254 RIMS2Q9UQ26 1411 aa20.19■□□□□ 0.82
H3F3B-213ENST00000593254 TBX22Q9Y458 520 aa20.18■□□□□ 0.82
H3F3B-213ENST00000593254 IQGAP3Q86VI3 1631 aa20.17■□□□□ 0.82
H3F3B-213ENST00000593254 ITGAEP38570 1179 aa20.16■□□□□ 0.82
H3F3B-213ENST00000593254 HDGFP51858 240 aaKnown RBP20.15■□□□□ 0.82
H3F3B-213ENST00000593254 MEX3CQ5U5Q3 659 aaKnown RBP20.15■□□□□ 0.82
H3F3B-213ENST00000593254 TRIM52Q96A61 297 aa20.15■□□□□ 0.82
H3F3B-213ENST00000593254 ADAMTS13Q76LX8 1427 aa20.15■□□□□ 0.82
H3F3B-213ENST00000593254 E9PCH4 1651 aa20.15■□□□□ 0.82
H3F3B-213ENST00000593254 DIP2AQ14689 1571 aa20.14■□□□□ 0.81
H3F3B-213ENST00000593254 PPP1R15AO75807 674 aaPredicted RBP20.14■□□□□ 0.81
H3F3B-213ENST00000593254 CADPS2Q86UW7 1296 aa20.14■□□□□ 0.81
H3F3B-213ENST00000593254 C19orf44Q9H6X5 657 aa20.14■□□□□ 0.81
H3F3B-213ENST00000593254 CDK12Q9NYV4 1490 aaPredicted RBP20.13■□□□□ 0.81
H3F3B-213ENST00000593254 PIK3R4Q99570 1358 aa20.12■□□□□ 0.81
H3F3B-213ENST00000593254 RXRBP28702 533 aa20.11■□□□□ 0.81
H3F3B-213ENST00000593254 C14orf37Q86TY3 774 aa20.1■□□□□ 0.81
H3F3B-213ENST00000593254 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.1■□□□□ 0.81
H3F3B-213ENST00000593254 ATF3P18847 181 aa20.09■□□□□ 0.81
H3F3B-213ENST00000593254 NUP155O75694 1391 aa20.08■□□□□ 0.81
H3F3B-213ENST00000593254 BRINP3Q76B58 766 aa20.08■□□□□ 0.81
H3F3B-213ENST00000593254 DCCP43146 1447 aa20.05■□□□□ 0.8
H3F3B-213ENST00000593254 PTPRUQ92729 1446 aa20.05■□□□□ 0.8
H3F3B-213ENST00000593254 TRPM2O94759 1503 aa20.05■□□□□ 0.8
H3F3B-213ENST00000593254 SETD5Q9C0A6 1442 aa20.04■□□□□ 0.8
H3F3B-213ENST00000593254 NUTM2DQ5VT03 806 aaPredicted RBP20.04■□□□□ 0.8
H3F3B-213ENST00000593254 AFF2P51816 1311 aa20.03■□□□□ 0.8
H3F3B-213ENST00000593254 ASXL1Q8IXJ9 1541 aa20.03■□□□□ 0.8
H3F3B-213ENST00000593254 NHSL1Q5SYE7 1610 aa20.03■□□□□ 0.8
H3F3B-213ENST00000593254 AMOTL2Q9Y2J4 779 aa20.03■□□□□ 0.8
H3F3B-213ENST00000593254 NAIPQ13075 1403 aa20.02■□□□□ 0.8
H3F3B-213ENST00000593254 NUTM2BA6NNL0 878 aaPredicted RBP20.02■□□□□ 0.8
H3F3B-213ENST00000593254 NUTM2EB1AL46 878 aaPredicted RBP20.02■□□□□ 0.8
H3F3B-213ENST00000593254 NUTM2AQ8IVF1 878 aaPredicted RBP20.02■□□□□ 0.8
H3F3B-213ENST00000593254 CHGAP10645 457 aaKnown RBP20.01■□□□□ 0.79
H3F3B-213ENST00000593254 SPHKAPQ2M3C7 1700 aa20.01■□□□□ 0.79
H3F3B-213ENST00000593254 XRN1Q8IZH2 1706 aaKnown RBP20.01■□□□□ 0.79
H3F3B-213ENST00000593254 MST1RQ04912 1400 aa20■□□□□ 0.79
H3F3B-213ENST00000593254 NRXN3Q9Y4C0 1643 aa19.99■□□□□ 0.79
H3F3B-213ENST00000593254 RGS12O14924 1447 aa19.99■□□□□ 0.79
H3F3B-213ENST00000593254 HFM1A2PYH4 1435 aa19.98■□□□□ 0.79
H3F3B-213ENST00000593254 EP400Q96L91 3159 aa19.97■□□□□ 0.79
H3F3B-213ENST00000593254 LRRC59Q96AG4 307 aaKnown RBP19.96■□□□□ 0.79
H3F3B-213ENST00000593254 SETBP1Q9Y6X0 1596 aa19.95■□□□□ 0.78
H3F3B-213ENST00000593254 RBM6P78332 1123 aaKnown RBP19.95■□□□□ 0.78
H3F3B-213ENST00000593254 QTRT2Q9H974 415 aaKnown RBP19.94■□□□□ 0.78
H3F3B-213ENST00000593254 PNPLA6Q8IY17 1366 aa19.94■□□□□ 0.78
H3F3B-213ENST00000593254 C8orf37Q96NL8 207 aa19.93■□□□□ 0.78
H3F3B-213ENST00000593254 DDX17Q92841 729 aaKnown RBP19.9■□□□□ 0.78
H3F3B-213ENST00000593254 ADGRL3Q9HAR2 1447 aa19.9■□□□□ 0.78
H3F3B-213ENST00000593254 METP08581 1390 aa19.89■□□□□ 0.77
H3F3B-213ENST00000593254 LAMC1P11047 1609 aa19.89■□□□□ 0.77
H3F3B-213ENST00000593254 CLTCL1P53675 1640 aa19.89■□□□□ 0.77
H3F3B-213ENST00000593254 NALCNQ8IZF0 1738 aa19.89■□□□□ 0.77
H3F3B-213ENST00000593254 KIF1BO60333 1816 aa19.86■□□□□ 0.77
H3F3B-213ENST00000593254 ATAD2Q6PL18 1390 aa19.84■□□□□ 0.77
H3F3B-213ENST00000593254 NGLY1Q96IV0 654 aa19.84■□□□□ 0.77
H3F3B-213ENST00000593254 C1orf167Q5SNV9 1468 aa19.83■□□□□ 0.76
H3F3B-213ENST00000593254 ADAMTS2O95450 1211 aa19.82■□□□□ 0.76
H3F3B-213ENST00000593254 NEXMIFQ5QGS0 1516 aa19.81■□□□□ 0.76
H3F3B-213ENST00000593254 SOS2Q07890 1332 aaPredicted RBP19.8■□□□□ 0.76
H3F3B-213ENST00000593254 SLC4A1APQ9BWU0 796 aaKnown RBP19.8■□□□□ 0.76
H3F3B-213ENST00000593254 FNBP4Q8N3X1 1017 aaPredicted RBP19.79■□□□□ 0.76
H3F3B-213ENST00000593254 USP21Q9UK80 565 aa19.79■□□□□ 0.76
H3F3B-213ENST00000593254 TRPC5Q9UL62 973 aaPredicted RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms