RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 SLC24A1O60721 1099 aa18.19■□□□□ 0.5
PTBP1-216ENST00000590887 FBXO31Q5XUX0 539 aaPredicted RBP18.19■□□□□ 0.5
PTBP1-216ENST00000590887 IFT172Q9UG01 1749 aa18.18■□□□□ 0.5
PTBP1-216ENST00000590887 PPLO60437 1756 aa18.17■□□□□ 0.5
PTBP1-216ENST00000590887 GPRASP1Q5JY77 1395 aa18.17■□□□□ 0.5
PTBP1-216ENST00000590887 TNRQ92752 1358 aa18.17■□□□□ 0.5
PTBP1-216ENST00000590887 USP47Q96K76 1375 aa18.17■□□□□ 0.5
PTBP1-216ENST00000590887 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.15■□□□□ 0.5
PTBP1-216ENST00000590887 ZFYVE9O95405 1425 aa18.15■□□□□ 0.5
PTBP1-216ENST00000590887 TMEM131LA2VDJ0 1609 aa18.14■□□□□ 0.49
PTBP1-216ENST00000590887 KDM5AP29375 1690 aaKnown RBP18.14■□□□□ 0.49
PTBP1-216ENST00000590887 EIF3AQ14152 1382 aaKnown RBP18.13■□□□□ 0.49
PTBP1-216ENST00000590887 NLRP1Q9C000 1473 aa18.13■□□□□ 0.49
PTBP1-216ENST00000590887 NRXN1Q9ULB1 1477 aa18.12■□□□□ 0.49
PTBP1-216ENST00000590887 C3P01024 1663 aa18.1■□□□□ 0.49
PTBP1-216ENST00000590887 HIRIP3Q9BW71 556 aaPredicted RBP18.1■□□□□ 0.49
PTBP1-216ENST00000590887 NEXMIFQ5QGS0 1516 aa18.09■□□□□ 0.49
PTBP1-216ENST00000590887 ADGRF5Q8IZF2 1346 aa18.09■□□□□ 0.49
PTBP1-216ENST00000590887 MYO5BQ9ULV0 1848 aa18.08■□□□□ 0.48
PTBP1-216ENST00000590887 NBPF1Q3BBV0 1214 aa18.08■□□□□ 0.48
PTBP1-216ENST00000590887 C14orf93Q9H972 538 aaKnown RBP18.08■□□□□ 0.48
PTBP1-216ENST00000590887 POLR1AO95602 1720 aaPredicted RBP18.07■□□□□ 0.48
PTBP1-216ENST00000590887 SETBP1Q9Y6X0 1596 aa18.07■□□□□ 0.48
PTBP1-216ENST00000590887 A2ML1A8K2U0 1454 aa18.07■□□□□ 0.48
PTBP1-216ENST00000590887 LMTK3Q96Q04 1460 aa18.07■□□□□ 0.48
PTBP1-216ENST00000590887 SCAF11Q99590 1463 aaKnown RBP18.07■□□□□ 0.48
PTBP1-216ENST00000590887 PIK3C2GO75747 1445 aa18.06■□□□□ 0.48
PTBP1-216ENST00000590887 ST20-MTHFSA0A0A6YYL1 179 aa18.05■□□□□ 0.48
PTBP1-216ENST00000590887 CDCA8Q53HL2 280 aa18.05■□□□□ 0.48
PTBP1-216ENST00000590887 CFAP70Q5T0N1 1121 aa18.05■□□□□ 0.48
PTBP1-216ENST00000590887 RIMS2Q9UQ26 1411 aa18.04■□□□□ 0.48
PTBP1-216ENST00000590887 DDX10Q13206 875 aaKnown RBP18.03■□□□□ 0.48
PTBP1-216ENST00000590887 THEMISQ8N1K5 641 aaPredicted RBP18.03■□□□□ 0.48
PTBP1-216ENST00000590887 CEBPAP49715 358 aaPredicted RBP18.02■□□□□ 0.48
PTBP1-216ENST00000590887 TMF1P82094 1093 aa18.02■□□□□ 0.48
PTBP1-216ENST00000590887 EID1Q9Y6B2 187 aa18.02■□□□□ 0.48
PTBP1-216ENST00000590887 SETD1BQ9UPS6 1966 aaKnown RBP18.02■□□□□ 0.47
PTBP1-216ENST00000590887 CCDC7Q96M83 1385 aa18.02■□□□□ 0.47
PTBP1-216ENST00000590887 IQGAP1P46940 1657 aa18.01■□□□□ 0.47
PTBP1-216ENST00000590887 UBR1Q8IWV7 1749 aa18.01■□□□□ 0.47
PTBP1-216ENST00000590887 PLPPR3Q6T4P5 718 aa17.99■□□□□ 0.47
PTBP1-216ENST00000590887 WASHC2AQ641Q2 1341 aa17.98■□□□□ 0.47
PTBP1-216ENST00000590887 TMEM2Q9UHN6 1383 aa17.98■□□□□ 0.47
PTBP1-216ENST00000590887 NUTM2DQ5VT03 806 aaPredicted RBP17.97■□□□□ 0.47
PTBP1-216ENST00000590887 KIF7Q2M1P5 1343 aa17.97■□□□□ 0.47
PTBP1-216ENST00000590887 ANP32CO43423 234 aa17.96■□□□□ 0.47
PTBP1-216ENST00000590887 BCANQ96GW7 911 aa17.95■□□□□ 0.46
PTBP1-216ENST00000590887 MYO3AQ8NEV4 1616 aa17.94■□□□□ 0.46
PTBP1-216ENST00000590887 TXNDC2Q86VQ3 553 aa17.93■□□□□ 0.46
PTBP1-216ENST00000590887 POLR3GLQ9BT43 218 aa17.93■□□□□ 0.46
PTBP1-216ENST00000590887 CENPJQ9HC77 1338 aaPredicted RBP17.93■□□□□ 0.46
PTBP1-216ENST00000590887 ALKQ9UM73 1620 aa17.92■□□□□ 0.46
PTBP1-216ENST00000590887 SLIT1O75093 1534 aa17.92■□□□□ 0.46
PTBP1-216ENST00000590887 SBNO2Q9Y2G9 1366 aa17.91■□□□□ 0.46
PTBP1-216ENST00000590887 ADGRB1O14514 1584 aa17.91■□□□□ 0.46
PTBP1-216ENST00000590887 TESK2Q96S53 571 aa17.91■□□□□ 0.46
PTBP1-216ENST00000590887 TRAK1Q9UPV9 953 aa17.91■□□□□ 0.46
PTBP1-216ENST00000590887 C11orf95C9JLR9 678 aaPredicted RBP17.9■□□□□ 0.46
PTBP1-216ENST00000590887 HSPA2P54652 639 aa17.9■□□□□ 0.46
PTBP1-216ENST00000590887 CEP170BQ9Y4F5 1589 aaPredicted RBP17.9■□□□□ 0.46
PTBP1-216ENST00000590887 PLEKHG1Q9ULL1 1385 aa17.9■□□□□ 0.46
PTBP1-216ENST00000590887 TMEM132EQ6IEE7 984 aa17.89■□□□□ 0.45
PTBP1-216ENST00000590887 ARHGAP23Q9P227 1491 aa17.88■□□□□ 0.45
PTBP1-216ENST00000590887 MIER1Q8N108 512 aa17.88■□□□□ 0.45
PTBP1-216ENST00000590887 ZNF142P52746 1687 aaPredicted RBP17.87■□□□□ 0.45
PTBP1-216ENST00000590887 PUS7Q96PZ0 661 aaKnown RBP17.87■□□□□ 0.45
PTBP1-216ENST00000590887 POGKQ9P215 609 aa17.87■□□□□ 0.45
PTBP1-216ENST00000590887 YTHDC2Q9H6S0 1430 aaKnown RBP17.87■□□□□ 0.45
PTBP1-216ENST00000590887 ANKLE2Q86XL3 938 aa17.86■□□□□ 0.45
PTBP1-216ENST00000590887 SIRT1Q96EB6 747 aa17.86■□□□□ 0.45
PTBP1-216ENST00000590887 LRPPRCP42704 1394 aaKnown RBP17.85■□□□□ 0.45
PTBP1-216ENST00000590887 STRCQ7RTU9 1775 aa17.84■□□□□ 0.45
PTBP1-216ENST00000590887 DLC1Q96QB1 1528 aa17.84■□□□□ 0.45
PTBP1-216ENST00000590887 ABCC11Q96J66 1382 aa17.84■□□□□ 0.45
PTBP1-216ENST00000590887 EVC2Q86UK5 1308 aa17.84■□□□□ 0.45
PTBP1-216ENST00000590887 STK26Q9P289 416 aa17.83■□□□□ 0.44
PTBP1-216ENST00000590887 TBX22Q9Y458 520 aa17.83■□□□□ 0.44
PTBP1-216ENST00000590887 ARHGEF28Q8N1W1 1705 aaKnown RBP17.83■□□□□ 0.44
PTBP1-216ENST00000590887 QRICH2Q9H0J4 1663 aa17.83■□□□□ 0.44
PTBP1-216ENST00000590887 DIP2AQ14689 1571 aa17.83■□□□□ 0.44
PTBP1-216ENST00000590887 CCER2I3L3R5 266 aa17.81■□□□□ 0.44
PTBP1-216ENST00000590887 LTKP29376 864 aa17.81■□□□□ 0.44
PTBP1-216ENST00000590887 DISP3Q9P2K9 1392 aa17.8■□□□□ 0.44
PTBP1-216ENST00000590887 DMRT2Q9Y5R5 561 aa17.8■□□□□ 0.44
PTBP1-216ENST00000590887 SETD1AO15047 1707 aaKnown RBP17.8■□□□□ 0.44
PTBP1-216ENST00000590887 NRXN3Q9Y4C0 1643 aa17.8■□□□□ 0.44
PTBP1-216ENST00000590887 KTN1Q86UP2 1357 aaKnown RBP17.79■□□□□ 0.44
PTBP1-216ENST00000590887 PIK3R4Q99570 1358 aa17.79■□□□□ 0.44
PTBP1-216ENST00000590887 KNDC1Q76NI1 1749 aa17.78■□□□□ 0.44
PTBP1-216ENST00000590887 ASXL1Q8IXJ9 1541 aa17.78■□□□□ 0.44
PTBP1-216ENST00000590887 PRAM1Q96QH2 718 aa17.77■□□□□ 0.44
PTBP1-216ENST00000590887 FAM135BQ49AJ0 1406 aa17.77■□□□□ 0.44
PTBP1-216ENST00000590887 ADAMTS13Q76LX8 1427 aa17.76■□□□□ 0.43
PTBP1-216ENST00000590887 SENP3Q9H4L4 574 aaPredicted RBP17.76■□□□□ 0.43
PTBP1-216ENST00000590887 TECPR2O15040 1411 aa17.75■□□□□ 0.43
PTBP1-216ENST00000590887 ILDR1Q86SU0 546 aaPredicted RBP17.75■□□□□ 0.43
PTBP1-216ENST00000590887 NINLQ9Y2I6 1382 aa17.75■□□□□ 0.43
PTBP1-216ENST00000590887 METP08581 1390 aa17.74■□□□□ 0.43
PTBP1-216ENST00000590887 MED14O60244 1454 aa17.74■□□□□ 0.43
PTBP1-216ENST00000590887 RALBP1Q15311 655 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms