RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 PPP1R15AO75807 674 aaPredicted RBP11.53□□□□□ -0.56
NPC1-208ENST00000590301 PPARGC1BQ86YN6 1023 aaKnown RBP11.53□□□□□ -0.56
NPC1-208ENST00000590301 PLEKHG1Q9ULL1 1385 aa11.53□□□□□ -0.56
NPC1-208ENST00000590301 ZFYVE9O95405 1425 aa11.52□□□□□ -0.56
NPC1-208ENST00000590301 HSPA1LP34931 641 aa11.52□□□□□ -0.57
NPC1-208ENST00000590301 RIMS2Q9UQ26 1411 aa11.52□□□□□ -0.57
NPC1-208ENST00000590301 IQGAP3Q86VI3 1631 aa11.51□□□□□ -0.57
NPC1-208ENST00000590301 BCANQ96GW7 911 aa11.51□□□□□ -0.57
NPC1-208ENST00000590301 SLC26A8Q96RN1 970 aa11.51□□□□□ -0.57
NPC1-208ENST00000590301 TMEM94Q12767 1356 aa11.5□□□□□ -0.57
NPC1-208ENST00000590301 NKTRP30414 1462 aaKnown RBP11.5□□□□□ -0.57
NPC1-208ENST00000590301 CHGAP10645 457 aaKnown RBP11.49□□□□□ -0.57
NPC1-208ENST00000590301 TBX22Q9Y458 520 aa11.49□□□□□ -0.57
NPC1-208ENST00000590301 GCC2Q8IWJ2 1684 aa11.49□□□□□ -0.57
NPC1-208ENST00000590301 PROSER2Q86WR7 435 aaPredicted RBP11.48□□□□□ -0.57
NPC1-208ENST00000590301 NAIPQ13075 1403 aa11.48□□□□□ -0.57
NPC1-208ENST00000590301 ALKQ9UM73 1620 aa11.47□□□□□ -0.57
NPC1-208ENST00000590301 HFM1A2PYH4 1435 aa11.47□□□□□ -0.57
NPC1-208ENST00000590301 PIK3R4Q99570 1358 aa11.47□□□□□ -0.57
NPC1-208ENST00000590301 MAPK8IP2Q13387 824 aaPredicted RBP11.47□□□□□ -0.57
NPC1-208ENST00000590301 TMEM131LA2VDJ0 1609 aa11.46□□□□□ -0.57
NPC1-208ENST00000590301 FAM135BQ49AJ0 1406 aa11.46□□□□□ -0.57
NPC1-208ENST00000590301 NCOA3Q9Y6Q9 1424 aa11.46□□□□□ -0.57
NPC1-208ENST00000590301 NWD1Q149M9 1564 aa11.45□□□□□ -0.58
NPC1-208ENST00000590301 E9PCH4 1651 aa11.45□□□□□ -0.58
NPC1-208ENST00000590301 STRCP1A6NGW2 1772 aa11.44□□□□□ -0.58
NPC1-208ENST00000590301 MSH6P52701 1360 aa11.44□□□□□ -0.58
NPC1-208ENST00000590301 DIP2AQ14689 1571 aa11.44□□□□□ -0.58
NPC1-208ENST00000590301 ADAMTS13Q76LX8 1427 aa11.43□□□□□ -0.58
NPC1-208ENST00000590301 ACIN1Q9UKV3 1341 aaKnown RBP11.43□□□□□ -0.58
NPC1-208ENST00000590301 SOCS7O14512 581 aa11.43□□□□□ -0.58
NPC1-208ENST00000590301 ILDR2Q71H61 639 aa11.43□□□□□ -0.58
NPC1-208ENST00000590301 CFAP65Q6ZU64 1925 aaKnown RBP11.42□□□□□ -0.58
NPC1-208ENST00000590301 ZNF326Q5BKZ1 582 aaKnown RBP11.41□□□□□ -0.58
NPC1-208ENST00000590301 TRPM2O94759 1503 aa11.4□□□□□ -0.58
NPC1-208ENST00000590301 TRIM52Q96A61 297 aa11.4□□□□□ -0.58
NPC1-208ENST00000590301 SLAIN2Q9P270 581 aa11.4□□□□□ -0.58
NPC1-208ENST00000590301 MED1Q15648 1581 aaPredicted RBP11.39□□□□□ -0.59
NPC1-208ENST00000590301 NUTM2DQ5VT03 806 aaPredicted RBP11.39□□□□□ -0.59
NPC1-208ENST00000590301 CADPS2Q86UW7 1296 aa11.39□□□□□ -0.59
NPC1-208ENST00000590301 C19orf44Q9H6X5 657 aa11.39□□□□□ -0.59
NPC1-208ENST00000590301 RPGRIP1LQ68CZ1 1315 aa11.38□□□□□ -0.59
NPC1-208ENST00000590301 C14orf37Q86TY3 774 aa11.38□□□□□ -0.59
NPC1-208ENST00000590301 RBM33Q96EV2 1170 aaKnown RBP11.38□□□□□ -0.59
NPC1-208ENST00000590301 AMOTL2Q9Y2J4 779 aa11.38□□□□□ -0.59
NPC1-208ENST00000590301 SETBP1Q9Y6X0 1596 aa11.37□□□□□ -0.59
NPC1-208ENST00000590301 VGFO15240 615 aaPredicted RBP11.37□□□□□ -0.59
NPC1-208ENST00000590301 ATF3P18847 181 aa11.37□□□□□ -0.59
NPC1-208ENST00000590301 DCCP43146 1447 aa11.36□□□□□ -0.59
NPC1-208ENST00000590301 SPHKAPQ2M3C7 1700 aa11.35□□□□□ -0.59
NPC1-208ENST00000590301 PTPRUQ92729 1446 aa11.35□□□□□ -0.59
NPC1-208ENST00000590301 NCBP3Q53F19 620 aaKnown RBP11.34□□□□□ -0.59
NPC1-208ENST00000590301 XIRP1Q702N8 1843 aaKnown RBP11.33□□□□□ -0.6
NPC1-208ENST00000590301 METP08581 1390 aa11.33□□□□□ -0.6
NPC1-208ENST00000590301 CLTCL1P53675 1640 aa11.33□□□□□ -0.6
NPC1-208ENST00000590301 NEXMIFQ5QGS0 1516 aa11.33□□□□□ -0.6
NPC1-208ENST00000590301 JCADQ9P266 1359 aa11.32□□□□□ -0.6
NPC1-208ENST00000590301 CHD2O14647 1828 aaKnown RBP11.32□□□□□ -0.6
NPC1-208ENST00000590301 ROBO1Q9Y6N7 1651 aa11.31□□□□□ -0.6
NPC1-208ENST00000590301 MPHOSPH9Q99550 1183 aa11.31□□□□□ -0.6
NPC1-208ENST00000590301 CCDC144AA2RUR9 1427 aa11.31□□□□□ -0.6
NPC1-208ENST00000590301 PRAG1Q86YV5 1406 aa11.31□□□□□ -0.6
NPC1-208ENST00000590301 PTCH1Q13635 1447 aa11.3□□□□□ -0.6
NPC1-208ENST00000590301 NRXN3Q9Y4C0 1643 aa11.3□□□□□ -0.6
NPC1-208ENST00000590301 MYO5BQ9ULV0 1848 aa11.3□□□□□ -0.6
NPC1-208ENST00000590301 ANKRD30BQ9BXX2 1392 aa11.29□□□□□ -0.6
NPC1-208ENST00000590301 ADGRL3Q9HAR2 1447 aa11.29□□□□□ -0.6
NPC1-208ENST00000590301 SPATA31A6Q5VVP1 1343 aa11.29□□□□□ -0.6
NPC1-208ENST00000590301 XRN1Q8IZH2 1706 aaKnown RBP11.29□□□□□ -0.6
NPC1-208ENST00000590301 SETD5Q9C0A6 1442 aa11.28□□□□□ -0.6
NPC1-208ENST00000590301 SLC24A1O60721 1099 aa11.28□□□□□ -0.6
NPC1-208ENST00000590301 PPP4R3CPQ6ZMV5 832 aa11.28□□□□□ -0.6
NPC1-208ENST00000590301 BRINP3Q76B58 766 aa11.28□□□□□ -0.6
NPC1-208ENST00000590301 MST1RQ04912 1400 aa11.26□□□□□ -0.61
NPC1-208ENST00000590301 SPATA31E1Q6ZUB1 1445 aa11.26□□□□□ -0.61
NPC1-208ENST00000590301 AHDC1Q5TGY3 1603 aaPredicted RBP11.26□□□□□ -0.61
NPC1-208ENST00000590301 RGS17Q9UGC6 210 aaPredicted RBP11.25□□□□□ -0.61
NPC1-208ENST00000590301 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.24□□□□□ -0.61
NPC1-208ENST00000590301 ROBO2Q9HCK4 1378 aa11.24□□□□□ -0.61
NPC1-208ENST00000590301 ASXL1Q8IXJ9 1541 aa11.24□□□□□ -0.61
NPC1-208ENST00000590301 COL16A1Q07092 1604 aaPredicted RBP11.24□□□□□ -0.61
NPC1-208ENST00000590301 HRCP23327 699 aa11.23□□□□□ -0.61
NPC1-208ENST00000590301 RGL3Q3MIN7 710 aa11.23□□□□□ -0.61
NPC1-208ENST00000590301 LRRC59Q96AG4 307 aaKnown RBP11.23□□□□□ -0.61
NPC1-208ENST00000590301 ADGRF5Q8IZF2 1346 aa11.23□□□□□ -0.61
NPC1-208ENST00000590301 KIF1BO60333 1816 aa11.23□□□□□ -0.61
NPC1-208ENST00000590301 TECPR2O15040 1411 aa11.22□□□□□ -0.61
NPC1-208ENST00000590301 PHLPP1O60346 1717 aa11.22□□□□□ -0.61
NPC1-208ENST00000590301 LRPPRCP42704 1394 aaKnown RBP11.22□□□□□ -0.61
NPC1-208ENST00000590301 C1orf167Q5SNV9 1468 aa11.22□□□□□ -0.61
NPC1-208ENST00000590301 RAB3GAP2Q9H2M9 1393 aa11.22□□□□□ -0.61
NPC1-208ENST00000590301 PIK3C2GO75747 1445 aa11.21□□□□□ -0.61
NPC1-208ENST00000590301 ABCC11Q96J66 1382 aa11.21□□□□□ -0.61
NPC1-208ENST00000590301 MEX3CQ5U5Q3 659 aaKnown RBP11.21□□□□□ -0.61
NPC1-208ENST00000590301 ZNF772Q68DY9 489 aaPredicted RBP11.2□□□□□ -0.62
NPC1-208ENST00000590301 POTEAQ6S8J7 498 aa11.2□□□□□ -0.62
NPC1-208ENST00000590301 SIRT1Q96EB6 747 aa11.19□□□□□ -0.62
NPC1-208ENST00000590301 STAC3Q96MF2 364 aa11.19□□□□□ -0.62
NPC1-208ENST00000590301 C14orf93Q9H972 538 aaKnown RBP11.18□□□□□ -0.62
NPC1-208ENST00000590301 MYOM2P54296 1465 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms