RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 SPATA31A6Q5VVP1 1343 aa20.26■□□□□ 0.83
NEDD4L-227ENST00000590020 CROCC2H7BZ55 1655 aa20.26■□□□□ 0.83
NEDD4L-227ENST00000590020 ABCC5O15440 1437 aa20.25■□□□□ 0.83
NEDD4L-227ENST00000590020 CHD2O14647 1828 aaKnown RBP20.25■□□□□ 0.83
NEDD4L-227ENST00000590020 RXRBP28702 533 aa20.24■□□□□ 0.83
NEDD4L-227ENST00000590020 C14orf37Q86TY3 774 aa20.24■□□□□ 0.83
NEDD4L-227ENST00000590020 NUTM2BA6NNL0 878 aaPredicted RBP20.23■□□□□ 0.83
NEDD4L-227ENST00000590020 NUTM2EB1AL46 878 aaPredicted RBP20.23■□□□□ 0.83
NEDD4L-227ENST00000590020 NUTM2AQ8IVF1 878 aaPredicted RBP20.23■□□□□ 0.83
NEDD4L-227ENST00000590020 FGD6Q6ZV73 1430 aa20.22■□□□□ 0.83
NEDD4L-227ENST00000590020 MYO5BQ9ULV0 1848 aa20.22■□□□□ 0.83
NEDD4L-227ENST00000590020 LMTK2Q8IWU2 1503 aa20.22■□□□□ 0.83
NEDD4L-227ENST00000590020 NOS1P29475 1434 aa20.21■□□□□ 0.83
NEDD4L-227ENST00000590020 CHIC2Q9UKJ5 165 aa20.21■□□□□ 0.83
NEDD4L-227ENST00000590020 SHPRHQ149N8 1683 aa20.21■□□□□ 0.83
NEDD4L-227ENST00000590020 PPP1R15AO75807 674 aaPredicted RBP20.2■□□□□ 0.82
NEDD4L-227ENST00000590020 AHDC1Q5TGY3 1603 aaPredicted RBP20.19■□□□□ 0.82
NEDD4L-227ENST00000590020 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.19■□□□□ 0.82
NEDD4L-227ENST00000590020 ZFYVE9O95405 1425 aa20.19■□□□□ 0.82
NEDD4L-227ENST00000590020 PLEKHG1Q9ULL1 1385 aa20.18■□□□□ 0.82
NEDD4L-227ENST00000590020 DAPK1P53355 1430 aa20.18■□□□□ 0.82
NEDD4L-227ENST00000590020 VPS8Q8N3P4 1428 aa20.18■□□□□ 0.82
NEDD4L-227ENST00000590020 NUTM2DQ5VT03 806 aaPredicted RBP20.17■□□□□ 0.82
NEDD4L-227ENST00000590020 RIMS2Q9UQ26 1411 aa20.17■□□□□ 0.82
NEDD4L-227ENST00000590020 PTPN23Q9H3S7 1636 aa20.16■□□□□ 0.82
NEDD4L-227ENST00000590020 GCC2Q8IWJ2 1684 aa20.16■□□□□ 0.82
NEDD4L-227ENST00000590020 SLC52A1Q9NWF4 448 aa20.16■□□□□ 0.82
NEDD4L-227ENST00000590020 AFF2P51816 1311 aa20.16■□□□□ 0.82
NEDD4L-227ENST00000590020 DIP2AQ14689 1571 aa20.14■□□□□ 0.81
NEDD4L-227ENST00000590020 ATF3P18847 181 aa20.14■□□□□ 0.81
NEDD4L-227ENST00000590020 BRINP3Q76B58 766 aa20.13■□□□□ 0.81
NEDD4L-227ENST00000590020 CADPS2Q86UW7 1296 aa20.13■□□□□ 0.81
NEDD4L-227ENST00000590020 CDK12Q9NYV4 1490 aaPredicted RBP20.12■□□□□ 0.81
NEDD4L-227ENST00000590020 C19orf44Q9H6X5 657 aa20.12■□□□□ 0.81
NEDD4L-227ENST00000590020 TBX22Q9Y458 520 aa20.12■□□□□ 0.81
NEDD4L-227ENST00000590020 RGS12O14924 1447 aa20.11■□□□□ 0.81
NEDD4L-227ENST00000590020 NCOA3Q9Y6Q9 1424 aa20.11■□□□□ 0.81
NEDD4L-227ENST00000590020 CHGAP10645 457 aaKnown RBP20.11■□□□□ 0.81
NEDD4L-227ENST00000590020 ANKRD30AQ9BXX3 1397 aa20.1■□□□□ 0.81
NEDD4L-227ENST00000590020 TMEM131LA2VDJ0 1609 aa20.1■□□□□ 0.81
NEDD4L-227ENST00000590020 ADAMTS13Q76LX8 1427 aa20.1■□□□□ 0.81
NEDD4L-227ENST00000590020 C8orf37Q96NL8 207 aa20.08■□□□□ 0.81
NEDD4L-227ENST00000590020 SRCAPQ6ZRS2 3230 aa20.08■□□□□ 0.8
NEDD4L-227ENST00000590020 HDGFP51858 240 aaKnown RBP20.07■□□□□ 0.8
NEDD4L-227ENST00000590020 QTRT2Q9H974 415 aaKnown RBP20.07■□□□□ 0.8
NEDD4L-227ENST00000590020 DDX17Q92841 729 aaKnown RBP20.05■□□□□ 0.8
NEDD4L-227ENST00000590020 ASXL1Q8IXJ9 1541 aa20.05■□□□□ 0.8
NEDD4L-227ENST00000590020 PTPRUQ92729 1446 aa20.04■□□□□ 0.8
NEDD4L-227ENST00000590020 AMOTL2Q9Y2J4 779 aa20.04■□□□□ 0.8
NEDD4L-227ENST00000590020 RPRD2Q5VT52 1461 aaKnown RBP20.04■□□□□ 0.8
NEDD4L-227ENST00000590020 LOC105371045A0A1W2PR82 267 aa20.03■□□□□ 0.8
NEDD4L-227ENST00000590020 RBM6P78332 1123 aaKnown RBP20.03■□□□□ 0.8
NEDD4L-227ENST00000590020 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.03■□□□□ 0.8
NEDD4L-227ENST00000590020 SETD5Q9C0A6 1442 aa20.02■□□□□ 0.79
NEDD4L-227ENST00000590020 NHSL1Q5SYE7 1610 aa20.01■□□□□ 0.79
NEDD4L-227ENST00000590020 PIK3R4Q99570 1358 aa19.99■□□□□ 0.79
NEDD4L-227ENST00000590020 TRPM2O94759 1503 aa19.99■□□□□ 0.79
NEDD4L-227ENST00000590020 MST1RQ04912 1400 aa19.99■□□□□ 0.79
NEDD4L-227ENST00000590020 ADAMTS2O95450 1211 aa19.98■□□□□ 0.79
NEDD4L-227ENST00000590020 LRRC59Q96AG4 307 aaKnown RBP19.98■□□□□ 0.79
NEDD4L-227ENST00000590020 PNPLA6Q8IY17 1366 aa19.97■□□□□ 0.79
NEDD4L-227ENST00000590020 ANKRD50Q9ULJ7 1429 aa19.97■□□□□ 0.79
NEDD4L-227ENST00000590020 NGLY1Q96IV0 654 aa19.96■□□□□ 0.79
NEDD4L-227ENST00000590020 UNC13BO14795 1591 aa19.95■□□□□ 0.78
NEDD4L-227ENST00000590020 E9PCH4 1651 aa19.95■□□□□ 0.78
NEDD4L-227ENST00000590020 ADGRL2O95490 1459 aa19.95■□□□□ 0.78
NEDD4L-227ENST00000590020 DCCP43146 1447 aa19.94■□□□□ 0.78
NEDD4L-227ENST00000590020 SETBP1Q9Y6X0 1596 aa19.94■□□□□ 0.78
NEDD4L-227ENST00000590020 ATAD2Q6PL18 1390 aa19.94■□□□□ 0.78
NEDD4L-227ENST00000590020 XRN1Q8IZH2 1706 aaKnown RBP19.93■□□□□ 0.78
NEDD4L-227ENST00000590020 FAM50AQ14320 339 aaKnown RBP19.92■□□□□ 0.78
NEDD4L-227ENST00000590020 ZRANB1Q9UGI0 708 aa19.92■□□□□ 0.78
NEDD4L-227ENST00000590020 NRXN3Q9Y4C0 1643 aa19.91■□□□□ 0.78
NEDD4L-227ENST00000590020 APLP2Q06481 763 aa19.91■□□□□ 0.78
NEDD4L-227ENST00000590020 USP21Q9UK80 565 aa19.89■□□□□ 0.77
NEDD4L-227ENST00000590020 NALCNQ8IZF0 1738 aa19.88■□□□□ 0.77
NEDD4L-227ENST00000590020 METP08581 1390 aa19.87■□□□□ 0.77
NEDD4L-227ENST00000590020 ADGRL3Q9HAR2 1447 aa19.85■□□□□ 0.77
NEDD4L-227ENST00000590020 TRPC5Q9UL62 973 aaPredicted RBP19.85■□□□□ 0.77
NEDD4L-227ENST00000590020 C1orf167Q5SNV9 1468 aa19.82■□□□□ 0.76
NEDD4L-227ENST00000590020 ZNF326Q5BKZ1 582 aaKnown RBP19.82■□□□□ 0.76
NEDD4L-227ENST00000590020 ORAI2Q96SN7 254 aa19.82■□□□□ 0.76
NEDD4L-227ENST00000590020 IQGAP3Q86VI3 1631 aa19.81■□□□□ 0.76
NEDD4L-227ENST00000590020 ATRNO75882 1429 aa19.81■□□□□ 0.76
NEDD4L-227ENST00000590020 EP400Q96L91 3159 aa19.8■□□□□ 0.76
NEDD4L-227ENST00000590020 FNBP4Q8N3X1 1017 aaPredicted RBP19.79■□□□□ 0.76
NEDD4L-227ENST00000590020 SOS2Q07890 1332 aaPredicted RBP19.77■□□□□ 0.76
NEDD4L-227ENST00000590020 NUP155O75694 1391 aa19.77■□□□□ 0.76
NEDD4L-227ENST00000590020 PTCH1Q13635 1447 aa19.76■□□□□ 0.75
NEDD4L-227ENST00000590020 LAMC1P11047 1609 aa19.76■□□□□ 0.75
NEDD4L-227ENST00000590020 BCL9LQ86UU0 1499 aa19.73■□□□□ 0.75
NEDD4L-227ENST00000590020 CCDC125Q86Z20 511 aa19.73■□□□□ 0.75
NEDD4L-227ENST00000590020 COL22A1Q8NFW1 1626 aaPredicted RBP19.73■□□□□ 0.75
NEDD4L-227ENST00000590020 SPHKAPQ2M3C7 1700 aa19.71■□□□□ 0.75
NEDD4L-227ENST00000590020 DEFB132Q7Z7B7 95 aa19.71■□□□□ 0.75
NEDD4L-227ENST00000590020 NEXMIFQ5QGS0 1516 aa19.71■□□□□ 0.75
NEDD4L-227ENST00000590020 ROBO2Q9HCK4 1378 aa19.7■□□□□ 0.74
NEDD4L-227ENST00000590020 XPCQ01831 940 aaPredicted RBP19.7■□□□□ 0.74
NEDD4L-227ENST00000590020 GJD4Q96KN9 370 aaPredicted RBP19.7■□□□□ 0.74
NEDD4L-227ENST00000590020 MYOM2P54296 1465 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms