RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 SPATA31A6Q5VVP1 1343 aa12.68□□□□□ -0.38
VAT1-207ENST00000589828 MEX3CQ5U5Q3 659 aaKnown RBP12.68□□□□□ -0.38
VAT1-207ENST00000589828 ABCC5O15440 1437 aa12.68□□□□□ -0.38
VAT1-207ENST00000589828 NOS1P29475 1434 aa12.68□□□□□ -0.38
VAT1-207ENST00000589828 ERBINQ96RT1 1412 aa12.68□□□□□ -0.38
VAT1-207ENST00000589828 COL16A1Q07092 1604 aaPredicted RBP12.67□□□□□ -0.38
VAT1-207ENST00000589828 BCANQ96GW7 911 aa12.67□□□□□ -0.38
VAT1-207ENST00000589828 PHLPP1O60346 1717 aa12.67□□□□□ -0.38
VAT1-207ENST00000589828 FGD6Q6ZV73 1430 aa12.66□□□□□ -0.38
VAT1-207ENST00000589828 RXRBP28702 533 aa12.66□□□□□ -0.38
VAT1-207ENST00000589828 NPM3O75607 178 aaKnown RBP12.65□□□□□ -0.38
VAT1-207ENST00000589828 LMTK2Q8IWU2 1503 aa12.65□□□□□ -0.38
VAT1-207ENST00000589828 KANK1Q14678 1352 aa12.65□□□□□ -0.38
VAT1-207ENST00000589828 ZFYVE9O95405 1425 aa12.64□□□□□ -0.39
VAT1-207ENST00000589828 SLC52A1Q9NWF4 448 aa12.64□□□□□ -0.39
VAT1-207ENST00000589828 PLEKHG1Q9ULL1 1385 aa12.64□□□□□ -0.39
VAT1-207ENST00000589828 ADGRB3O60242 1522 aa12.63□□□□□ -0.39
VAT1-207ENST00000589828 TBX22Q9Y458 520 aa12.63□□□□□ -0.39
VAT1-207ENST00000589828 NUTM2BA6NNL0 878 aaPredicted RBP12.62□□□□□ -0.39
VAT1-207ENST00000589828 NUTM2EB1AL46 878 aaPredicted RBP12.62□□□□□ -0.39
VAT1-207ENST00000589828 NUTM2AQ8IVF1 878 aaPredicted RBP12.62□□□□□ -0.39
VAT1-207ENST00000589828 CHIC2Q9UKJ5 165 aa12.62□□□□□ -0.39
VAT1-207ENST00000589828 RIMS2Q9UQ26 1411 aa12.62□□□□□ -0.39
VAT1-207ENST00000589828 NCOA3Q9Y6Q9 1424 aa12.62□□□□□ -0.39
VAT1-207ENST00000589828 BRINP3Q76B58 766 aa12.61□□□□□ -0.39
VAT1-207ENST00000589828 C14orf37Q86TY3 774 aa12.61□□□□□ -0.39
VAT1-207ENST00000589828 C19orf44Q9H6X5 657 aa12.61□□□□□ -0.39
VAT1-207ENST00000589828 VPS8Q8N3P4 1428 aa12.61□□□□□ -0.39
VAT1-207ENST00000589828 AFF2P51816 1311 aa12.61□□□□□ -0.39
VAT1-207ENST00000589828 KDM5AP29375 1690 aaKnown RBP12.61□□□□□ -0.39
VAT1-207ENST00000589828 AHDC1Q5TGY3 1603 aaPredicted RBP12.6□□□□□ -0.39
VAT1-207ENST00000589828 CADPS2Q86UW7 1296 aa12.6□□□□□ -0.39
VAT1-207ENST00000589828 DAPK1P53355 1430 aa12.6□□□□□ -0.39
VAT1-207ENST00000589828 CDK12Q9NYV4 1490 aaPredicted RBP12.59□□□□□ -0.39
VAT1-207ENST00000589828 PPP1R15AO75807 674 aaPredicted RBP12.59□□□□□ -0.39
VAT1-207ENST00000589828 NUTM2DQ5VT03 806 aaPredicted RBP12.59□□□□□ -0.39
VAT1-207ENST00000589828 ADAMTS13Q76LX8 1427 aa12.59□□□□□ -0.39
VAT1-207ENST00000589828 RGS12O14924 1447 aa12.58□□□□□ -0.4
VAT1-207ENST00000589828 ATF3P18847 181 aa12.58□□□□□ -0.4
VAT1-207ENST00000589828 DIP2AQ14689 1571 aa12.57□□□□□ -0.4
VAT1-207ENST00000589828 ANKRD30AQ9BXX3 1397 aa12.56□□□□□ -0.4
VAT1-207ENST00000589828 PTPRUQ92729 1446 aa12.56□□□□□ -0.4
VAT1-207ENST00000589828 QTRT2Q9H974 415 aaKnown RBP12.56□□□□□ -0.4
VAT1-207ENST00000589828 SHPRHQ149N8 1683 aa12.55□□□□□ -0.4
VAT1-207ENST00000589828 HDGFP51858 240 aaKnown RBP12.55□□□□□ -0.4
VAT1-207ENST00000589828 DDX17Q92841 729 aaKnown RBP12.55□□□□□ -0.4
VAT1-207ENST00000589828 AMOTL2Q9Y2J4 779 aa12.55□□□□□ -0.4
VAT1-207ENST00000589828 CHD2O14647 1828 aaKnown RBP12.55□□□□□ -0.4
VAT1-207ENST00000589828 SETD5Q9C0A6 1442 aa12.54□□□□□ -0.4
VAT1-207ENST00000589828 CHGAP10645 457 aaKnown RBP12.54□□□□□ -0.4
VAT1-207ENST00000589828 RBM6P78332 1123 aaKnown RBP12.54□□□□□ -0.4
VAT1-207ENST00000589828 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.54□□□□□ -0.4
VAT1-207ENST00000589828 C8orf37Q96NL8 207 aa12.54□□□□□ -0.4
VAT1-207ENST00000589828 PTPN23Q9H3S7 1636 aa12.53□□□□□ -0.4
VAT1-207ENST00000589828 LOC105371045A0A1W2PR82 267 aa12.53□□□□□ -0.4
VAT1-207ENST00000589828 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.53□□□□□ -0.4
VAT1-207ENST00000589828 PIK3R4Q99570 1358 aa12.53□□□□□ -0.4
VAT1-207ENST00000589828 CROCC2H7BZ55 1655 aa12.52□□□□□ -0.4
VAT1-207ENST00000589828 RPRD2Q5VT52 1461 aaKnown RBP12.52□□□□□ -0.41
VAT1-207ENST00000589828 TMEM131LA2VDJ0 1609 aa12.51□□□□□ -0.41
VAT1-207ENST00000589828 RNF216Q9NWF9 866 aaPredicted RBP12.51□□□□□ -0.41
VAT1-207ENST00000589828 PNPLA6Q8IY17 1366 aa12.51□□□□□ -0.41
VAT1-207ENST00000589828 MST1RQ04912 1400 aa12.51□□□□□ -0.41
VAT1-207ENST00000589828 ASXL1Q8IXJ9 1541 aa12.51□□□□□ -0.41
VAT1-207ENST00000589828 LRRC59Q96AG4 307 aaKnown RBP12.5□□□□□ -0.41
VAT1-207ENST00000589828 DCCP43146 1447 aa12.49□□□□□ -0.41
VAT1-207ENST00000589828 ADGRL2O95490 1459 aa12.48□□□□□ -0.41
VAT1-207ENST00000589828 ANKRD50Q9ULJ7 1429 aa12.48□□□□□ -0.41
VAT1-207ENST00000589828 ADAMTS2O95450 1211 aa12.48□□□□□ -0.41
VAT1-207ENST00000589828 SRCAPQ6ZRS2 3230 aa12.47□□□□□ -0.41
VAT1-207ENST00000589828 NGLY1Q96IV0 654 aa12.47□□□□□ -0.41
VAT1-207ENST00000589828 GCC2Q8IWJ2 1684 aa12.46□□□□□ -0.41
VAT1-207ENST00000589828 MYO5BQ9ULV0 1848 aa12.46□□□□□ -0.42
VAT1-207ENST00000589828 METP08581 1390 aa12.45□□□□□ -0.42
VAT1-207ENST00000589828 ATAD2Q6PL18 1390 aa12.45□□□□□ -0.42
VAT1-207ENST00000589828 ZRANB1Q9UGI0 708 aa12.45□□□□□ -0.42
VAT1-207ENST00000589828 TRPM2O94759 1503 aa12.45□□□□□ -0.42
VAT1-207ENST00000589828 SETBP1Q9Y6X0 1596 aa12.44□□□□□ -0.42
VAT1-207ENST00000589828 HOXD11P31277 338 aaPredicted RBP12.44□□□□□ -0.42
VAT1-207ENST00000589828 USP21Q9UK80 565 aa12.44□□□□□ -0.42
VAT1-207ENST00000589828 NHSL1Q5SYE7 1610 aa12.42□□□□□ -0.42
VAT1-207ENST00000589828 FAM50AQ14320 339 aaKnown RBP12.42□□□□□ -0.42
VAT1-207ENST00000589828 FNBP4Q8N3X1 1017 aaPredicted RBP12.42□□□□□ -0.42
VAT1-207ENST00000589828 TRPC5Q9UL62 973 aaPredicted RBP12.42□□□□□ -0.42
VAT1-207ENST00000589828 UNC13BO14795 1591 aa12.42□□□□□ -0.42
VAT1-207ENST00000589828 C1orf167Q5SNV9 1468 aa12.41□□□□□ -0.42
VAT1-207ENST00000589828 ATRNO75882 1429 aa12.41□□□□□ -0.42
VAT1-207ENST00000589828 ORAI2Q96SN7 254 aa12.41□□□□□ -0.42
VAT1-207ENST00000589828 ADGRL3Q9HAR2 1447 aa12.41□□□□□ -0.42
VAT1-207ENST00000589828 SOS2Q07890 1332 aaPredicted RBP12.4□□□□□ -0.42
VAT1-207ENST00000589828 XRN1Q8IZH2 1706 aaKnown RBP12.4□□□□□ -0.42
VAT1-207ENST00000589828 APLP2Q06481 763 aa12.4□□□□□ -0.42
VAT1-207ENST00000589828 NRXN3Q9Y4C0 1643 aa12.4□□□□□ -0.42
VAT1-207ENST00000589828 E9PCH4 1651 aa12.37□□□□□ -0.43
VAT1-207ENST00000589828 PTCH1Q13635 1447 aa12.37□□□□□ -0.43
VAT1-207ENST00000589828 BCL9LQ86UU0 1499 aa12.36□□□□□ -0.43
VAT1-207ENST00000589828 NUP155O75694 1391 aa12.36□□□□□ -0.43
VAT1-207ENST00000589828 ZNF326Q5BKZ1 582 aaKnown RBP12.35□□□□□ -0.43
VAT1-207ENST00000589828 CCDC125Q86Z20 511 aa12.35□□□□□ -0.43
VAT1-207ENST00000589828 MYOM2P54296 1465 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 323 ms