RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 KIF1BO60333 1816 aa14.87□□□□□ -0.03
PTPN2-208ENST00000589216 NRXN3Q9Y4C0 1643 aa14.85□□□□□ -0.03
PTPN2-208ENST00000589216 TRIM52Q96A61 297 aa14.85□□□□□ -0.03
PTPN2-208ENST00000589216 NWD1Q149M9 1564 aa14.85□□□□□ -0.03
PTPN2-208ENST00000589216 ALKQ9UM73 1620 aa14.84□□□□□ -0.03
PTPN2-208ENST00000589216 SETD5Q9C0A6 1442 aa14.84□□□□□ -0.03
PTPN2-208ENST00000589216 NEXMIFQ5QGS0 1516 aa14.84□□□□□ -0.03
PTPN2-208ENST00000589216 LRRC7Q96NW7 1537 aa14.83□□□□□ -0.04
PTPN2-208ENST00000589216 EID1Q9Y6B2 187 aa14.83□□□□□ -0.04
PTPN2-208ENST00000589216 RAB3GAP2Q9H2M9 1393 aa14.83□□□□□ -0.04
PTPN2-208ENST00000589216 CHGAP10645 457 aaKnown RBP14.82□□□□□ -0.04
PTPN2-208ENST00000589216 PLEKHG1Q9ULL1 1385 aa14.82□□□□□ -0.04
PTPN2-208ENST00000589216 SLC4A1APQ9BWU0 796 aaKnown RBP14.81□□□□□ -0.04
PTPN2-208ENST00000589216 CHD2O14647 1828 aaKnown RBP14.8□□□□□ -0.04
PTPN2-208ENST00000589216 NUTM2DQ5VT03 806 aaPredicted RBP14.8□□□□□ -0.04
PTPN2-208ENST00000589216 ADAMTS13Q76LX8 1427 aa14.8□□□□□ -0.04
PTPN2-208ENST00000589216 PPLO60437 1756 aa14.8□□□□□ -0.04
PTPN2-208ENST00000589216 DIP2AQ14689 1571 aa14.79□□□□□ -0.04
PTPN2-208ENST00000589216 SLC26A8Q96RN1 970 aa14.79□□□□□ -0.04
PTPN2-208ENST00000589216 SETBP1Q9Y6X0 1596 aa14.79□□□□□ -0.04
PTPN2-208ENST00000589216 IFT172Q9UG01 1749 aa14.78□□□□□ -0.04
PTPN2-208ENST00000589216 SETD1AO15047 1707 aaKnown RBP14.78□□□□□ -0.04
PTPN2-208ENST00000589216 XRN1Q8IZH2 1706 aaKnown RBP14.76□□□□□ -0.05
PTPN2-208ENST00000589216 PPP1R15AO75807 674 aaPredicted RBP14.76□□□□□ -0.05
PTPN2-208ENST00000589216 POTEDQ86YR6 584 aa14.76□□□□□ -0.05
PTPN2-208ENST00000589216 NKTRP30414 1462 aaKnown RBP14.76□□□□□ -0.05
PTPN2-208ENST00000589216 MPHOSPH9Q99550 1183 aa14.75□□□□□ -0.05
PTPN2-208ENST00000589216 CCDC144AA2RUR9 1427 aa14.73□□□□□ -0.05
PTPN2-208ENST00000589216 SPATA31E1Q6ZUB1 1445 aa14.73□□□□□ -0.05
PTPN2-208ENST00000589216 UBAP1LF5GYI3 381 aa14.72□□□□□ -0.05
PTPN2-208ENST00000589216 PTPRUQ92729 1446 aa14.72□□□□□ -0.05
PTPN2-208ENST00000589216 ZNF326Q5BKZ1 582 aaKnown RBP14.71□□□□□ -0.05
PTPN2-208ENST00000589216 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.71□□□□□ -0.05
PTPN2-208ENST00000589216 BCANQ96GW7 911 aa14.71□□□□□ -0.05
PTPN2-208ENST00000589216 TMEM94Q12767 1356 aa14.71□□□□□ -0.06
PTPN2-208ENST00000589216 KCNA6P17658 529 aa14.69□□□□□ -0.06
PTPN2-208ENST00000589216 RBM33Q96EV2 1170 aaKnown RBP14.69□□□□□ -0.06
PTPN2-208ENST00000589216 HDGFP51858 240 aaKnown RBP14.67□□□□□ -0.06
PTPN2-208ENST00000589216 TBX22Q9Y458 520 aa14.67□□□□□ -0.06
PTPN2-208ENST00000589216 METP08581 1390 aa14.67□□□□□ -0.06
PTPN2-208ENST00000589216 ASXL1Q8IXJ9 1541 aa14.66□□□□□ -0.06
PTPN2-208ENST00000589216 PIK3R4Q99570 1358 aa14.66□□□□□ -0.06
PTPN2-208ENST00000589216 NALCNQ8IZF0 1738 aa14.66□□□□□ -0.06
PTPN2-208ENST00000589216 MSH5O43196 834 aa14.65□□□□□ -0.06
PTPN2-208ENST00000589216 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.64□□□□□ -0.07
PTPN2-208ENST00000589216 ANKRD30BQ9BXX2 1392 aa14.64□□□□□ -0.07
PTPN2-208ENST00000589216 PIP4K2BP78356 416 aa14.64□□□□□ -0.07
PTPN2-208ENST00000589216 SCAF1Q9H7N4 1312 aaKnown RBP14.64□□□□□ -0.07
PTPN2-208ENST00000589216 ROBO1Q9Y6N7 1651 aa14.63□□□□□ -0.07
PTPN2-208ENST00000589216 PROSER2Q86WR7 435 aaPredicted RBP14.63□□□□□ -0.07
PTPN2-208ENST00000589216 ACIN1Q9UKV3 1341 aaKnown RBP14.62□□□□□ -0.07
PTPN2-208ENST00000589216 PIK3C2GO75747 1445 aa14.61□□□□□ -0.07
PTPN2-208ENST00000589216 TOM1O60784 492 aa14.61□□□□□ -0.07
PTPN2-208ENST00000589216 MYOM2P54296 1465 aa14.61□□□□□ -0.07
PTPN2-208ENST00000589216 RPGRIP1LQ68CZ1 1315 aa14.61□□□□□ -0.07
PTPN2-208ENST00000589216 ADGRF5Q8IZF2 1346 aa14.61□□□□□ -0.07
PTPN2-208ENST00000589216 RGL3Q3MIN7 710 aa14.6□□□□□ -0.07
PTPN2-208ENST00000589216 NRXN1Q9ULB1 1477 aa14.6□□□□□ -0.07
PTPN2-208ENST00000589216 KNDC1Q76NI1 1749 aa14.59□□□□□ -0.07
PTPN2-208ENST00000589216 HRCP23327 699 aa14.59□□□□□ -0.07
PTPN2-208ENST00000589216 AMOTL2Q9Y2J4 779 aa14.59□□□□□ -0.07
PTPN2-208ENST00000589216 LAMC1P11047 1609 aa14.59□□□□□ -0.07
PTPN2-208ENST00000589216 PRAG1Q86YV5 1406 aa14.58□□□□□ -0.07
PTPN2-208ENST00000589216 HSPA1LP34931 641 aa14.58□□□□□ -0.08
PTPN2-208ENST00000589216 MSH6P52701 1360 aa14.58□□□□□ -0.08
PTPN2-208ENST00000589216 PTCH1Q13635 1447 aa14.58□□□□□ -0.08
PTPN2-208ENST00000589216 VGFO15240 615 aaPredicted RBP14.57□□□□□ -0.08
PTPN2-208ENST00000589216 ROBO2Q9HCK4 1378 aa14.56□□□□□ -0.08
PTPN2-208ENST00000589216 NCOA3Q9Y6Q9 1424 aa14.56□□□□□ -0.08
PTPN2-208ENST00000589216 ADGRL3Q9HAR2 1447 aa14.55□□□□□ -0.08
PTPN2-208ENST00000589216 PHLPP1O60346 1717 aa14.53□□□□□ -0.08
PTPN2-208ENST00000589216 MED1Q15648 1581 aaPredicted RBP14.53□□□□□ -0.08
PTPN2-208ENST00000589216 DCCP43146 1447 aa14.53□□□□□ -0.08
PTPN2-208ENST00000589216 FAM135BQ49AJ0 1406 aa14.53□□□□□ -0.08
PTPN2-208ENST00000589216 ADGRB1O14514 1584 aa14.52□□□□□ -0.08
PTPN2-208ENST00000589216 TECPR2O15040 1411 aa14.52□□□□□ -0.08
PTPN2-208ENST00000589216 DHX57Q6P158 1386 aaKnown RBP14.52□□□□□ -0.08
PTPN2-208ENST00000589216 COL16A1Q07092 1604 aaPredicted RBP14.52□□□□□ -0.09
PTPN2-208ENST00000589216 MST1RQ04912 1400 aa14.51□□□□□ -0.09
PTPN2-208ENST00000589216 C14orf37Q86TY3 774 aa14.51□□□□□ -0.09
PTPN2-208ENST00000589216 CDC42BPGQ6DT37 1551 aa14.51□□□□□ -0.09
PTPN2-208ENST00000589216 NHSL1Q5SYE7 1610 aa14.49□□□□□ -0.09
PTPN2-208ENST00000589216 AHDC1Q5TGY3 1603 aaPredicted RBP14.49□□□□□ -0.09
PTPN2-208ENST00000589216 YTHDC2Q9H6S0 1430 aaKnown RBP14.49□□□□□ -0.09
PTPN2-208ENST00000589216 LRPPRCP42704 1394 aaKnown RBP14.48□□□□□ -0.09
PTPN2-208ENST00000589216 PLEKHH1Q9ULM0 1364 aa14.48□□□□□ -0.09
PTPN2-208ENST00000589216 TMEM132EQ6IEE7 984 aa14.48□□□□□ -0.09
PTPN2-208ENST00000589216 C19orf44Q9H6X5 657 aa14.47□□□□□ -0.09
PTPN2-208ENST00000589216 SLAIN2Q9P270 581 aa14.47□□□□□ -0.09
PTPN2-208ENST00000589216 CFAP70Q5T0N1 1121 aa14.46□□□□□ -0.09
PTPN2-208ENST00000589216 ARHGEF28Q8N1W1 1705 aaKnown RBP14.46□□□□□ -0.1
PTPN2-208ENST00000589216 FMN2Q9NZ56 1722 aa14.46□□□□□ -0.1
PTPN2-208ENST00000589216 PIAS4Q8N2W9 510 aaPredicted RBP14.45□□□□□ -0.1
PTPN2-208ENST00000589216 STK26Q9P289 416 aa14.45□□□□□ -0.1
PTPN2-208ENST00000589216 ABCC11Q96J66 1382 aa14.45□□□□□ -0.1
PTPN2-208ENST00000589216 KIAA1210Q9ULL0 1709 aa14.44□□□□□ -0.1
PTPN2-208ENST00000589216 ATF3P18847 181 aa14.44□□□□□ -0.1
PTPN2-208ENST00000589216 TRIM26Q12899 539 aaPredicted RBP14.44□□□□□ -0.1
PTPN2-208ENST00000589216 CADPS2Q86UW7 1296 aa14.44□□□□□ -0.1
PTPN2-208ENST00000589216 DCAF11Q8TEB1 546 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms