RNA–Protein interactions for RNA: ENST00000589073.1

PDE4A-206, Transcript of phosphodiesterase 4A, humanhuman

TSL 5

Gene PDE4A, Length 1,703 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-206ENST00000589073 NLRP1Q9C000 1473 aa27.86■■■□□ 2.05
PDE4A-206ENST00000589073 NRXN1Q9ULB1 1477 aa27.83■■■□□ 2.05
PDE4A-206ENST00000589073 KDM5AP29375 1690 aaKnown RBP27.82■■■□□ 2.04
PDE4A-206ENST00000589073 NUTM2DQ5VT03 806 aaPredicted RBP27.81■■■□□ 2.04
PDE4A-206ENST00000589073 VGFO15240 615 aaPredicted RBP27.81■■■□□ 2.04
PDE4A-206ENST00000589073 NBPF1Q3BBV0 1214 aa27.81■■■□□ 2.04
PDE4A-206ENST00000589073 UBR1Q8IWV7 1749 aa27.8■■■□□ 2.04
PDE4A-206ENST00000589073 PTPRMP28827 1452 aa27.8■■■□□ 2.04
PDE4A-206ENST00000589073 ROCK2O75116 1388 aaKnown RBP27.79■■■□□ 2.04
PDE4A-206ENST00000589073 ZFYVE9O95405 1425 aa27.78■■■□□ 2.04
PDE4A-206ENST00000589073 EIF4G2P78344 907 aaKnown RBP eCLIP27.77■■■□□ 2.045e-12■■■■■ 62.1
PDE4A-206ENST00000589073 HIRIP3Q9BW71 556 aaPredicted RBP27.77■■■□□ 2.04
PDE4A-206ENST00000589073 CARD11Q9BXL7 1154 aa27.77■■■□□ 2.04
PDE4A-206ENST00000589073 MYO3AQ8NEV4 1616 aa27.77■■■□□ 2.04
PDE4A-206ENST00000589073 GPRASP1Q5JY77 1395 aa27.76■■■□□ 2.03
PDE4A-206ENST00000589073 PIK3C2GO75747 1445 aa27.76■■■□□ 2.03
PDE4A-206ENST00000589073 RIMS2Q9UQ26 1411 aa27.76■■■□□ 2.03
PDE4A-206ENST00000589073 HSPA5P11021 654 aaKnown RBP27.75■■■□□ 2.03
PDE4A-206ENST00000589073 SETD1BQ9UPS6 1966 aaKnown RBP27.74■■■□□ 2.03
PDE4A-206ENST00000589073 KIAA1210Q9ULL0 1709 aa27.74■■■□□ 2.03
PDE4A-206ENST00000589073 CFAP70Q5T0N1 1121 aa27.74■■■□□ 2.03
PDE4A-206ENST00000589073 TMEM2Q9UHN6 1383 aa27.71■■■□□ 2.03
PDE4A-206ENST00000589073 USP47Q96K76 1375 aa27.7■■■□□ 2.03
PDE4A-206ENST00000589073 C14orf93Q9H972 538 aaKnown RBP27.7■■■□□ 2.03
PDE4A-206ENST00000589073 LAMC1P11047 1609 aa27.7■■■□□ 2.02
PDE4A-206ENST00000589073 KDM4FA0A1W2PPD8 638 aa27.7■■■□□ 2.02
PDE4A-206ENST00000589073 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.69■■■□□ 2.02
PDE4A-206ENST00000589073 CEP170BQ9Y4F5 1589 aaPredicted RBP27.69■■■□□ 2.02
PDE4A-206ENST00000589073 HDGFP51858 240 aaKnown RBP27.67■■■□□ 2.02
PDE4A-206ENST00000589073 THEMISQ8N1K5 641 aaPredicted RBP27.67■■■□□ 2.02
PDE4A-206ENST00000589073 SENP3Q9H4L4 574 aaPredicted RBP27.64■■■□□ 2.01
PDE4A-206ENST00000589073 ZNF142P52746 1687 aaPredicted RBP27.63■■■□□ 2.01
PDE4A-206ENST00000589073 SLIT1O75093 1534 aa27.63■■■□□ 2.01
PDE4A-206ENST00000589073 ARHGAP23Q9P227 1491 aa27.63■■■□□ 2.01
PDE4A-206ENST00000589073 SETBP1Q9Y6X0 1596 aa27.62■■■□□ 2.01
PDE4A-206ENST00000589073 LTKP29376 864 aa27.61■■■□□ 2.01
PDE4A-206ENST00000589073 TXNDC2Q86VQ3 553 aa27.59■■■□□ 2.01
PDE4A-206ENST00000589073 ADGRB1O14514 1584 aa27.59■■■□□ 2.01
PDE4A-206ENST00000589073 IQGAP1P46940 1657 aa27.59■■■□□ 2.01
PDE4A-206ENST00000589073 ST20-MTHFSA0A0A6YYL1 179 aa27.58■■■□□ 2.01
PDE4A-206ENST00000589073 TMEM132EQ6IEE7 984 aa27.58■■■□□ 2.01
PDE4A-206ENST00000589073 SCAF11Q99590 1463 aaKnown RBP27.58■■■□□ 2
PDE4A-206ENST00000589073 ALKQ9UM73 1620 aa27.57■■■□□ 2
PDE4A-206ENST00000589073 EID1Q9Y6B2 187 aa27.57■■■□□ 2
PDE4A-206ENST00000589073 NRXN3Q9Y4C0 1643 aa27.55■■■□□ 2
PDE4A-206ENST00000589073 PLEKHG1Q9ULL1 1385 aa27.52■■■□□ 2
PDE4A-206ENST00000589073 ASXL1Q8IXJ9 1541 aa27.52■■■□□ 2
PDE4A-206ENST00000589073 C11orf95C9JLR9 678 aaPredicted RBP27.51■■□□□ 1.99
PDE4A-206ENST00000589073 SETD1AO15047 1707 aaKnown RBP27.51■■□□□ 1.99
PDE4A-206ENST00000589073 BCANQ96GW7 911 aa27.5■■□□□ 1.99
PDE4A-206ENST00000589073 TRAK1Q9UPV9 953 aa27.47■■□□□ 1.99
PDE4A-206ENST00000589073 EIF3AQ14152 1382 aaKnown RBP27.47■■□□□ 1.99
PDE4A-206ENST00000589073 WASHC2AQ641Q2 1341 aa27.46■■□□□ 1.99
PDE4A-206ENST00000589073 ANKLE2Q86XL3 938 aa27.46■■□□□ 1.99
PDE4A-206ENST00000589073 TESK2Q96S53 571 aa27.46■■□□□ 1.99
PDE4A-206ENST00000589073 ADAMTS13Q76LX8 1427 aa27.46■■□□□ 1.99
PDE4A-206ENST00000589073 YTHDC2Q9H6S0 1430 aaKnown RBP27.44■■□□□ 1.98
PDE4A-206ENST00000589073 DIEXFQ68CQ4 756 aaKnown RBP27.43■■□□□ 1.98
PDE4A-206ENST00000589073 STK26Q9P289 416 aa27.43■■□□□ 1.98
PDE4A-206ENST00000589073 METP08581 1390 aa27.43■■□□□ 1.98
PDE4A-206ENST00000589073 MED14O60244 1454 aa27.42■■□□□ 1.98
PDE4A-206ENST00000589073 CCDC7Q96M83 1385 aa27.42■■□□□ 1.98
PDE4A-206ENST00000589073 POLR1AO95602 1720 aaPredicted RBP27.41■■□□□ 1.98
PDE4A-206ENST00000589073 KIF7Q2M1P5 1343 aa27.4■■□□□ 1.98
PDE4A-206ENST00000589073 SLC26A8Q96RN1 970 aa27.4■■□□□ 1.98
PDE4A-206ENST00000589073 ARHGEF28Q8N1W1 1705 aaKnown RBP27.39■■□□□ 1.98
PDE4A-206ENST00000589073 DDX10Q13206 875 aaKnown RBP27.38■■□□□ 1.97
PDE4A-206ENST00000589073 LRPPRCP42704 1394 aaKnown RBP27.38■■□□□ 1.97
PDE4A-206ENST00000589073 TBX22Q9Y458 520 aa27.38■■□□□ 1.97
PDE4A-206ENST00000589073 CENPJQ9HC77 1338 aaPredicted RBP27.38■■□□□ 1.97
PDE4A-206ENST00000589073 ABCC11Q96J66 1382 aa27.35■■□□□ 1.97
PDE4A-206ENST00000589073 TMF1P82094 1093 aa27.34■■□□□ 1.97
PDE4A-206ENST00000589073 DISP3Q9P2K9 1392 aa27.34■■□□□ 1.97
PDE4A-206ENST00000589073 DIP2AQ14689 1571 aa27.34■■□□□ 1.97
PDE4A-206ENST00000589073 NCKAP5LQ9HCH0 1330 aa27.33■■□□□ 1.96
PDE4A-206ENST00000589073 QRICH2Q9H0J4 1663 aa27.32■■□□□ 1.96
PDE4A-206ENST00000589073 DLC1Q96QB1 1528 aa27.31■■□□□ 1.96
PDE4A-206ENST00000589073 SBNO2Q9Y2G9 1366 aa27.31■■□□□ 1.96
PDE4A-206ENST00000589073 LMTK3Q96Q04 1460 aa27.31■■□□□ 1.96
PDE4A-206ENST00000589073 POLR3GLQ9BT43 218 aa27.3■■□□□ 1.96
PDE4A-206ENST00000589073 NPHP4O75161 1426 aaPredicted RBP27.3■■□□□ 1.96
PDE4A-206ENST00000589073 SLC24A1O60721 1099 aa27.3■■□□□ 1.96
PDE4A-206ENST00000589073 HSPA2P54652 639 aa27.3■■□□□ 1.96
PDE4A-206ENST00000589073 PRAM1Q96QH2 718 aa27.3■■□□□ 1.96
PDE4A-206ENST00000589073 PTPRUQ92729 1446 aa27.28■■□□□ 1.96
PDE4A-206ENST00000589073 KNDC1Q76NI1 1749 aa27.28■■□□□ 1.96
PDE4A-206ENST00000589073 POGKQ9P215 609 aa27.27■■□□□ 1.96
PDE4A-206ENST00000589073 TECPR2O15040 1411 aa27.27■■□□□ 1.96
PDE4A-206ENST00000589073 SAFB2Q14151 953 aaKnown RBP eCLIP27.27■■□□□ 1.96
PDE4A-206ENST00000589073 SIRT1Q96EB6 747 aa27.26■■□□□ 1.95
PDE4A-206ENST00000589073 WAPLQ7Z5K2 1190 aa27.25■■□□□ 1.95
PDE4A-206ENST00000589073 AMOTL2Q9Y2J4 779 aa27.24■■□□□ 1.95
PDE4A-206ENST00000589073 CPS1P31327 1500 aa27.23■■□□□ 1.95
PDE4A-206ENST00000589073 PIK3R4Q99570 1358 aa27.23■■□□□ 1.95
PDE4A-206ENST00000589073 PLEKHH1Q9ULM0 1364 aa27.23■■□□□ 1.95
PDE4A-206ENST00000589073 CDCA8Q53HL2 280 aa27.22■■□□□ 1.95
PDE4A-206ENST00000589073 FAM135BQ49AJ0 1406 aa27.22■■□□□ 1.95
PDE4A-206ENST00000589073 ROBO2Q9HCK4 1378 aa27.21■■□□□ 1.95
PDE4A-206ENST00000589073 MINK1Q8N4C8 1332 aaPredicted RBP27.19■■□□□ 1.94
PDE4A-206ENST00000589073 CHD2O14647 1828 aaKnown RBP27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms