RNA–Protein interactions for RNA: ENST00000588580.6

SUGP1-208, Transcript of SURP and G-patch domain containing 1, humanhuman

TSL 2

Gene SUGP1, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-208ENST00000588580 EID1Q9Y6B2 187 aa23.59■■□□□ 1.37
SUGP1-208ENST00000588580 TMEM94Q12767 1356 aa23.58■■□□□ 1.37
SUGP1-208ENST00000588580 RBM33Q96EV2 1170 aaKnown RBP23.58■■□□□ 1.37
SUGP1-208ENST00000588580 SLIT1O75093 1534 aa23.57■■□□□ 1.36
SUGP1-208ENST00000588580 SETD1AO15047 1707 aaKnown RBP23.56■■□□□ 1.36
SUGP1-208ENST00000588580 PCGF6Q9BYE7 350 aa23.55■■□□□ 1.36
SUGP1-208ENST00000588580 KCNA6P17658 529 aa23.54■■□□□ 1.36
SUGP1-208ENST00000588580 PROSER2Q86WR7 435 aaPredicted RBP23.54■■□□□ 1.36
SUGP1-208ENST00000588580 RPRD2Q5VT52 1461 aaKnown RBP23.54■■□□□ 1.36
SUGP1-208ENST00000588580 ACIN1Q9UKV3 1341 aaKnown RBP23.54■■□□□ 1.36
SUGP1-208ENST00000588580 ROBO1Q9Y6N7 1651 aa23.53■■□□□ 1.36
SUGP1-208ENST00000588580 UPF1Q92900 1129 aaKnown RBP eCLIP23.52■■□□□ 1.36
SUGP1-208ENST00000588580 SPHKAPQ2M3C7 1700 aa23.5■■□□□ 1.35
SUGP1-208ENST00000588580 TRIM52Q96A61 297 aa23.5■■□□□ 1.35
SUGP1-208ENST00000588580 SLC26A8Q96RN1 970 aa23.49■■□□□ 1.35
SUGP1-208ENST00000588580 TMEM2Q9UHN6 1383 aa23.49■■□□□ 1.35
SUGP1-208ENST00000588580 NOS1P29475 1434 aa23.48■■□□□ 1.35
SUGP1-208ENST00000588580 SLAIN2Q9P270 581 aa23.46■■□□□ 1.35
SUGP1-208ENST00000588580 STAG3Q9UJ98 1225 aa23.46■■□□□ 1.35
SUGP1-208ENST00000588580 JCADQ9P266 1359 aa23.45■■□□□ 1.34
SUGP1-208ENST00000588580 SLC4A1APQ9BWU0 796 aaKnown RBP23.44■■□□□ 1.34
SUGP1-208ENST00000588580 PIK3C2BO00750 1634 aa23.44■■□□□ 1.34
SUGP1-208ENST00000588580 MPHOSPH9Q99550 1183 aa23.43■■□□□ 1.34
SUGP1-208ENST00000588580 IDI1Q13907 227 aa23.42■■□□□ 1.34
SUGP1-208ENST00000588580 TRPM2O94759 1503 aa23.42■■□□□ 1.34
SUGP1-208ENST00000588580 PHLPP1O60346 1717 aa23.4■■□□□ 1.34
SUGP1-208ENST00000588580 MSH6P52701 1360 aa23.39■■□□□ 1.33
SUGP1-208ENST00000588580 ZNF772Q68DY9 489 aaPredicted RBP23.37■■□□□ 1.33
SUGP1-208ENST00000588580 CLTCL1P53675 1640 aa23.37■■□□□ 1.33
SUGP1-208ENST00000588580 DHX57Q6P158 1386 aaKnown RBP23.36■■□□□ 1.33
SUGP1-208ENST00000588580 MEX3CQ5U5Q3 659 aaKnown RBP23.35■■□□□ 1.33
SUGP1-208ENST00000588580 LRP6O75581 1613 aa23.34■■□□□ 1.33
SUGP1-208ENST00000588580 KDM5AP29375 1690 aaKnown RBP23.34■■□□□ 1.33
SUGP1-208ENST00000588580 SPATA31A6Q5VVP1 1343 aa23.33■■□□□ 1.33
SUGP1-208ENST00000588580 FOXD1Q16676 465 aa23.33■■□□□ 1.33
SUGP1-208ENST00000588580 BCANQ96GW7 911 aa23.33■■□□□ 1.33
SUGP1-208ENST00000588580 NKTRP30414 1462 aaKnown RBP23.32■■□□□ 1.32
SUGP1-208ENST00000588580 MYO5BQ9ULV0 1848 aa23.31■■□□□ 1.32
SUGP1-208ENST00000588580 RXRBP28702 533 aa23.31■■□□□ 1.32
SUGP1-208ENST00000588580 COL16A1Q07092 1604 aaPredicted RBP23.3■■□□□ 1.32
SUGP1-208ENST00000588580 ADGRB3O60242 1522 aa23.3■■□□□ 1.32
SUGP1-208ENST00000588580 NWD1Q149M9 1564 aa23.3■■□□□ 1.32
SUGP1-208ENST00000588580 ANKRD30BQ9BXX2 1392 aa23.29■■□□□ 1.32
SUGP1-208ENST00000588580 TMEM131LA2VDJ0 1609 aa23.29■■□□□ 1.32
SUGP1-208ENST00000588580 KIF1BO60333 1816 aa23.27■■□□□ 1.32
SUGP1-208ENST00000588580 SLC52A1Q9NWF4 448 aa23.24■■□□□ 1.31
SUGP1-208ENST00000588580 CCDC144AA2RUR9 1427 aa23.22■■□□□ 1.31
SUGP1-208ENST00000588580 NUTM2BA6NNL0 878 aaPredicted RBP23.21■■□□□ 1.31
SUGP1-208ENST00000588580 NUTM2EB1AL46 878 aaPredicted RBP23.21■■□□□ 1.31
SUGP1-208ENST00000588580 NUTM2AQ8IVF1 878 aaPredicted RBP23.21■■□□□ 1.31
SUGP1-208ENST00000588580 CHD2O14647 1828 aaKnown RBP23.2■■□□□ 1.3
SUGP1-208ENST00000588580 C14orf37Q86TY3 774 aa23.2■■□□□ 1.3
SUGP1-208ENST00000588580 NCOA3Q9Y6Q9 1424 aa23.18■■□□□ 1.3
SUGP1-208ENST00000588580 CADPS2Q86UW7 1296 aa23.18■■□□□ 1.3
SUGP1-208ENST00000588580 TBX22Q9Y458 520 aa23.18■■□□□ 1.3
SUGP1-208ENST00000588580 SRCAPQ6ZRS2 3230 aa23.18■■□□□ 1.3
SUGP1-208ENST00000588580 CDK12Q9NYV4 1490 aaPredicted RBP23.17■■□□□ 1.3
SUGP1-208ENST00000588580 SPATA31E1Q6ZUB1 1445 aa23.17■■□□□ 1.3
SUGP1-208ENST00000588580 PLEKHG1Q9ULL1 1385 aa23.17■■□□□ 1.3
SUGP1-208ENST00000588580 C19orf44Q9H6X5 657 aa23.17■■□□□ 1.3
SUGP1-208ENST00000588580 AFF2P51816 1311 aa23.16■■□□□ 1.3
SUGP1-208ENST00000588580 ATF3P18847 181 aa23.16■■□□□ 1.3
SUGP1-208ENST00000588580 IFT172Q9UG01 1749 aa23.16■■□□□ 1.3
SUGP1-208ENST00000588580 SHPRHQ149N8 1683 aa23.16■■□□□ 1.3
SUGP1-208ENST00000588580 AHDC1Q5TGY3 1603 aaPredicted RBP23.15■■□□□ 1.3
SUGP1-208ENST00000588580 ZFYVE9O95405 1425 aa23.15■■□□□ 1.3
SUGP1-208ENST00000588580 PPP1R15AO75807 674 aaPredicted RBP23.14■■□□□ 1.29
SUGP1-208ENST00000588580 HDGFP51858 240 aaKnown RBP23.14■■□□□ 1.29
SUGP1-208ENST00000588580 BRINP3Q76B58 766 aa23.13■■□□□ 1.29
SUGP1-208ENST00000588580 PPLO60437 1756 aa23.12■■□□□ 1.29
SUGP1-208ENST00000588580 RIMS2Q9UQ26 1411 aa23.12■■□□□ 1.29
SUGP1-208ENST00000588580 NEXMIFQ5QGS0 1516 aa23.12■■□□□ 1.29
SUGP1-208ENST00000588580 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.11■■□□□ 1.29
SUGP1-208ENST00000588580 QTRT2Q9H974 415 aaKnown RBP23.11■■□□□ 1.29
SUGP1-208ENST00000588580 DIP2AQ14689 1571 aa23.09■■□□□ 1.29
SUGP1-208ENST00000588580 RBM6P78332 1123 aaKnown RBP23.08■■□□□ 1.29
SUGP1-208ENST00000588580 NUTM2DQ5VT03 806 aaPredicted RBP23.08■■□□□ 1.29
SUGP1-208ENST00000588580 RGS12O14924 1447 aa23.07■■□□□ 1.28
SUGP1-208ENST00000588580 ADAMTS13Q76LX8 1427 aa23.06■■□□□ 1.28
SUGP1-208ENST00000588580 CLSPNQ9HAW4 1339 aa23.06■■□□□ 1.28
SUGP1-208ENST00000588580 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.05■■□□□ 1.28
SUGP1-208ENST00000588580 C8orf37Q96NL8 207 aa23.05■■□□□ 1.28
SUGP1-208ENST00000588580 CHGAP10645 457 aaKnown RBP23.04■■□□□ 1.28
SUGP1-208ENST00000588580 AMOTL2Q9Y2J4 779 aa23.04■■□□□ 1.28
SUGP1-208ENST00000588580 SIN3AQ96ST3 1273 aa23.03■■□□□ 1.28
SUGP1-208ENST00000588580 LRRC59Q96AG4 307 aaKnown RBP23.02■■□□□ 1.28
SUGP1-208ENST00000588580 PIK3R4Q99570 1358 aa23.01■■□□□ 1.27
SUGP1-208ENST00000588580 NRXN3Q9Y4C0 1643 aa23■■□□□ 1.27
SUGP1-208ENST00000588580 DDX17Q92841 729 aaKnown RBP22.99■■□□□ 1.27
SUGP1-208ENST00000588580 PTPRUQ92729 1446 aa22.99■■□□□ 1.27
SUGP1-208ENST00000588580 MYOM2P54296 1465 aa22.98■■□□□ 1.27
SUGP1-208ENST00000588580 CCER1Q8TC90 406 aaPredicted RBP22.98■■□□□ 1.27
SUGP1-208ENST00000588580 RPGRIP1LQ68CZ1 1315 aa22.97■■□□□ 1.27
SUGP1-208ENST00000588580 NRXN1Q9ULB1 1477 aa22.97■■□□□ 1.27
SUGP1-208ENST00000588580 RGL3Q3MIN7 710 aa22.96■■□□□ 1.27
SUGP1-208ENST00000588580 ZNF326Q5BKZ1 582 aaKnown RBP22.96■■□□□ 1.27
SUGP1-208ENST00000588580 NGLY1Q96IV0 654 aa22.96■■□□□ 1.27
SUGP1-208ENST00000588580 ZRANB1Q9UGI0 708 aa22.96■■□□□ 1.27
SUGP1-208ENST00000588580 ASXL1Q8IXJ9 1541 aa22.96■■□□□ 1.27
SUGP1-208ENST00000588580 SETBP1Q9Y6X0 1596 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms