RNA–Protein interactions for RNA: ENST00000588500.1

SMIM22-203, Transcript of small integral membrane protein 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMIM22, Length 525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM22-203ENST00000588500 SPATA31A6Q5VVP1 1343 aa27.22■■□□□ 1.95
SMIM22-203ENST00000588500 KANK4Q5T7N3 995 aaPredicted RBP27.22■■□□□ 1.95
SMIM22-203ENST00000588500 ABCC5O15440 1437 aa27.22■■□□□ 1.95
SMIM22-203ENST00000588500 VPS8Q8N3P4 1428 aa27.22■■□□□ 1.95
SMIM22-203ENST00000588500 LMTK2Q8IWU2 1503 aa27.21■■□□□ 1.95
SMIM22-203ENST00000588500 C14orf37Q86TY3 774 aa27.21■■□□□ 1.95
SMIM22-203ENST00000588500 MYO5BQ9ULV0 1848 aa27.2■■□□□ 1.95
SMIM22-203ENST00000588500 PTPN23Q9H3S7 1636 aa27.19■■□□□ 1.94
SMIM22-203ENST00000588500 FGD6Q6ZV73 1430 aa27.19■■□□□ 1.94
SMIM22-203ENST00000588500 SHPRHQ149N8 1683 aa27.18■■□□□ 1.94
SMIM22-203ENST00000588500 PPP1R15AO75807 674 aaPredicted RBP27.18■■□□□ 1.94
SMIM22-203ENST00000588500 NOS1P29475 1434 aa27.17■■□□□ 1.94
SMIM22-203ENST00000588500 DAPK1P53355 1430 aa27.16■■□□□ 1.94
SMIM22-203ENST00000588500 GCC2Q8IWJ2 1684 aa27.15■■□□□ 1.94
SMIM22-203ENST00000588500 AHDC1Q5TGY3 1603 aaPredicted RBP27.13■■□□□ 1.93
SMIM22-203ENST00000588500 PLEKHG1Q9ULL1 1385 aa27.13■■□□□ 1.93
SMIM22-203ENST00000588500 RXRBP28702 533 aa27.13■■□□□ 1.93
SMIM22-203ENST00000588500 SLC52A1Q9NWF4 448 aa27.13■■□□□ 1.93
SMIM22-203ENST00000588500 CHIC2Q9UKJ5 165 aa27.12■■□□□ 1.93
SMIM22-203ENST00000588500 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.12■■□□□ 1.93
SMIM22-203ENST00000588500 ANKRD30AQ9BXX3 1397 aa27.1■■□□□ 1.93
SMIM22-203ENST00000588500 ZFYVE9O95405 1425 aa27.1■■□□□ 1.93
SMIM22-203ENST00000588500 RIMS2Q9UQ26 1411 aa27.1■■□□□ 1.93
SMIM22-203ENST00000588500 NUTM2BA6NNL0 878 aaPredicted RBP27.1■■□□□ 1.93
SMIM22-203ENST00000588500 NUTM2EB1AL46 878 aaPredicted RBP27.1■■□□□ 1.93
SMIM22-203ENST00000588500 NUTM2AQ8IVF1 878 aaPredicted RBP27.1■■□□□ 1.93
SMIM22-203ENST00000588500 ATF3P18847 181 aa27.08■■□□□ 1.93
SMIM22-203ENST00000588500 CADPS2Q86UW7 1296 aa27.08■■□□□ 1.93
SMIM22-203ENST00000588500 NCOA3Q9Y6Q9 1424 aa27.07■■□□□ 1.92
SMIM22-203ENST00000588500 HDGFP51858 240 aaKnown RBP27.07■■□□□ 1.92
SMIM22-203ENST00000588500 CDK12Q9NYV4 1490 aaPredicted RBP27.05■■□□□ 1.92
SMIM22-203ENST00000588500 TMEM131LA2VDJ0 1609 aa27.04■■□□□ 1.92
SMIM22-203ENST00000588500 CHGAP10645 457 aaKnown RBP27.03■■□□□ 1.92
SMIM22-203ENST00000588500 RPRD2Q5VT52 1461 aaKnown RBP27.03■■□□□ 1.92
SMIM22-203ENST00000588500 AFF2P51816 1311 aa27.02■■□□□ 1.92
SMIM22-203ENST00000588500 TBX22Q9Y458 520 aa27.02■■□□□ 1.92
SMIM22-203ENST00000588500 DIP2AQ14689 1571 aa27.01■■□□□ 1.92
SMIM22-203ENST00000588500 C19orf44Q9H6X5 657 aa27.01■■□□□ 1.91
SMIM22-203ENST00000588500 NUTM2DQ5VT03 806 aaPredicted RBP27■■□□□ 1.91
SMIM22-203ENST00000588500 BRINP3Q76B58 766 aa26.97■■□□□ 1.91
SMIM22-203ENST00000588500 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.97■■□□□ 1.91
SMIM22-203ENST00000588500 ADAMTS13Q76LX8 1427 aa26.96■■□□□ 1.91
SMIM22-203ENST00000588500 RGS12O14924 1447 aa26.94■■□□□ 1.9
SMIM22-203ENST00000588500 APLP2Q06481 763 aa26.94■■□□□ 1.9
SMIM22-203ENST00000588500 TRPM2O94759 1503 aa26.94■■□□□ 1.9
SMIM22-203ENST00000588500 ASXL1Q8IXJ9 1541 aa26.93■■□□□ 1.9
SMIM22-203ENST00000588500 PIK3R4Q99570 1358 aa26.93■■□□□ 1.9
SMIM22-203ENST00000588500 C8orf37Q96NL8 207 aa26.91■■□□□ 1.9
SMIM22-203ENST00000588500 NHSL1Q5SYE7 1610 aa26.9■■□□□ 1.9
SMIM22-203ENST00000588500 ADGRL2O95490 1459 aa26.9■■□□□ 1.9
SMIM22-203ENST00000588500 ANKRD50Q9ULJ7 1429 aa26.9■■□□□ 1.9
SMIM22-203ENST00000588500 AMOTL2Q9Y2J4 779 aa26.89■■□□□ 1.9
SMIM22-203ENST00000588500 SETD5Q9C0A6 1442 aa26.88■■□□□ 1.89
SMIM22-203ENST00000588500 RBM6P78332 1123 aaKnown RBP26.87■■□□□ 1.89
SMIM22-203ENST00000588500 QTRT2Q9H974 415 aaKnown RBP26.87■■□□□ 1.89
SMIM22-203ENST00000588500 LOC105371045A0A1W2PR82 267 aa26.86■■□□□ 1.89
SMIM22-203ENST00000588500 DCCP43146 1447 aa26.86■■□□□ 1.89
SMIM22-203ENST00000588500 PTPRUQ92729 1446 aa26.85■■□□□ 1.89
SMIM22-203ENST00000588500 E9PCH4 1651 aa26.85■■□□□ 1.89
SMIM22-203ENST00000588500 UNC13BO14795 1591 aa26.84■■□□□ 1.89
SMIM22-203ENST00000588500 LRRC59Q96AG4 307 aaKnown RBP26.83■■□□□ 1.89
SMIM22-203ENST00000588500 MST1RQ04912 1400 aa26.82■■□□□ 1.88
SMIM22-203ENST00000588500 FAM50AQ14320 339 aaKnown RBP26.81■■□□□ 1.88
SMIM22-203ENST00000588500 XRN1Q8IZH2 1706 aaKnown RBP26.81■■□□□ 1.88
SMIM22-203ENST00000588500 SRCAPQ6ZRS2 3230 aa26.79■■□□□ 1.88
SMIM22-203ENST00000588500 DDX17Q92841 729 aaKnown RBP26.79■■□□□ 1.88
SMIM22-203ENST00000588500 ATAD2Q6PL18 1390 aa26.79■■□□□ 1.88
SMIM22-203ENST00000588500 PNPLA6Q8IY17 1366 aa26.79■■□□□ 1.88
SMIM22-203ENST00000588500 ADAMTS2O95450 1211 aa26.78■■□□□ 1.88
SMIM22-203ENST00000588500 NGLY1Q96IV0 654 aa26.77■■□□□ 1.88
SMIM22-203ENST00000588500 NRXN3Q9Y4C0 1643 aa26.75■■□□□ 1.87
SMIM22-203ENST00000588500 FOXD1Q16676 465 aa26.73■■□□□ 1.87
SMIM22-203ENST00000588500 ZRANB1Q9UGI0 708 aa26.72■■□□□ 1.87
SMIM22-203ENST00000588500 NALCNQ8IZF0 1738 aa26.72■■□□□ 1.87
SMIM22-203ENST00000588500 IQGAP3Q86VI3 1631 aa26.71■■□□□ 1.87
SMIM22-203ENST00000588500 SETBP1Q9Y6X0 1596 aa26.71■■□□□ 1.87
SMIM22-203ENST00000588500 ADGRL3Q9HAR2 1447 aa26.7■■□□□ 1.86
SMIM22-203ENST00000588500 USP21Q9UK80 565 aa26.68■■□□□ 1.86
SMIM22-203ENST00000588500 ZNF326Q5BKZ1 582 aaKnown RBP26.66■■□□□ 1.86
SMIM22-203ENST00000588500 METP08581 1390 aa26.66■■□□□ 1.86
SMIM22-203ENST00000588500 TRPC5Q9UL62 973 aaPredicted RBP26.65■■□□□ 1.86
SMIM22-203ENST00000588500 C1orf167Q5SNV9 1468 aa26.62■■□□□ 1.85
SMIM22-203ENST00000588500 SPHKAPQ2M3C7 1700 aa26.61■■□□□ 1.85
SMIM22-203ENST00000588500 NUP155O75694 1391 aa26.59■■□□□ 1.85
SMIM22-203ENST00000588500 LAMC1P11047 1609 aa26.58■■□□□ 1.85
SMIM22-203ENST00000588500 PTCH1Q13635 1447 aa26.58■■□□□ 1.85
SMIM22-203ENST00000588500 ATRNO75882 1429 aa26.56■■□□□ 1.84
SMIM22-203ENST00000588500 EP400Q96L91 3159 aa26.54■■□□□ 1.84
SMIM22-203ENST00000588500 SOS2Q07890 1332 aaPredicted RBP26.54■■□□□ 1.84
SMIM22-203ENST00000588500 FNBP4Q8N3X1 1017 aaPredicted RBP26.53■■□□□ 1.84
SMIM22-203ENST00000588500 ORAI2Q96SN7 254 aa26.53■■□□□ 1.84
SMIM22-203ENST00000588500 COL22A1Q8NFW1 1626 aaPredicted RBP26.53■■□□□ 1.84
SMIM22-203ENST00000588500 CCDC125Q86Z20 511 aa26.51■■□□□ 1.83
SMIM22-203ENST00000588500 MARF1Q9Y4F3 1742 aaKnown RBP26.51■■□□□ 1.83
SMIM22-203ENST00000588500 NEXMIFQ5QGS0 1516 aa26.5■■□□□ 1.83
SMIM22-203ENST00000588500 ROCK1Q13464 1354 aa26.5■■□□□ 1.83
SMIM22-203ENST00000588500 CLTCL1P53675 1640 aa26.46■■□□□ 1.83
SMIM22-203ENST00000588500 KIF1BO60333 1816 aa26.46■■□□□ 1.83
SMIM22-203ENST00000588500 MYOM2P54296 1465 aa26.44■■□□□ 1.82
SMIM22-203ENST00000588500 ROBO2Q9HCK4 1378 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms