RNA–Protein interactions for RNA: ENST00000588329.5

RAD23A-204, Transcript of RAD23 homolog A, nucleotide excision repair protein, humanhuman

TSL 5

Gene RAD23A, Length 1,034 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23A-204ENST00000588329 LRRC7Q96NW7 1537 aa27.21■■□□□ 1.95
RAD23A-204ENST00000588329 E9PCH4 1651 aa27.21■■□□□ 1.95
RAD23A-204ENST00000588329 PPP1R15AO75807 674 aaPredicted RBP27.2■■□□□ 1.94
RAD23A-204ENST00000588329 IQGAP3Q86VI3 1631 aa27.19■■□□□ 1.94
RAD23A-204ENST00000588329 TRIM26Q12899 539 aaPredicted RBP27.19■■□□□ 1.94
RAD23A-204ENST00000588329 RBM33Q96EV2 1170 aaKnown RBP27.18■■□□□ 1.94
RAD23A-204ENST00000588329 KDM5AP29375 1690 aaKnown RBP27.17■■□□□ 1.94
RAD23A-204ENST00000588329 MYO5BQ9ULV0 1848 aa27.16■■□□□ 1.94
RAD23A-204ENST00000588329 RIMS2Q9UQ26 1411 aa27.16■■□□□ 1.94
RAD23A-204ENST00000588329 PHF23Q9BUL5 403 aaPredicted RBP27.14■■□□□ 1.94
RAD23A-204ENST00000588329 TRIM52Q96A61 297 aa27.12■■□□□ 1.93
RAD23A-204ENST00000588329 NAIPQ13075 1403 aa27.12■■□□□ 1.93
RAD23A-204ENST00000588329 TMEM131LA2VDJ0 1609 aa27.12■■□□□ 1.93
RAD23A-204ENST00000588329 ZFYVE9O95405 1425 aa27.1■■□□□ 1.93
RAD23A-204ENST00000588329 KCNA6P17658 529 aa27.1■■□□□ 1.93
RAD23A-204ENST00000588329 HDGFP51858 240 aaKnown RBP27.1■■□□□ 1.93
RAD23A-204ENST00000588329 PROSER2Q86WR7 435 aaPredicted RBP27.09■■□□□ 1.93
RAD23A-204ENST00000588329 TMEM94Q12767 1356 aa27.07■■□□□ 1.92
RAD23A-204ENST00000588329 PLEKHG1Q9ULL1 1385 aa27.05■■□□□ 1.92
RAD23A-204ENST00000588329 ZNF326Q5BKZ1 582 aaKnown RBP27.04■■□□□ 1.92
RAD23A-204ENST00000588329 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.04■■□□□ 1.92
RAD23A-204ENST00000588329 XIRP1Q702N8 1843 aaKnown RBP27■■□□□ 1.91
RAD23A-204ENST00000588329 HFM1A2PYH4 1435 aa26.99■■□□□ 1.91
RAD23A-204ENST00000588329 SPHKAPQ2M3C7 1700 aa26.98■■□□□ 1.91
RAD23A-204ENST00000588329 SLC4A1APQ9BWU0 796 aaKnown RBP26.97■■□□□ 1.91
RAD23A-204ENST00000588329 TBX22Q9Y458 520 aa26.96■■□□□ 1.91
RAD23A-204ENST00000588329 FOXD1Q16676 465 aa26.94■■□□□ 1.9
RAD23A-204ENST00000588329 ADAMTS13Q76LX8 1427 aa26.93■■□□□ 1.9
RAD23A-204ENST00000588329 C14orf37Q86TY3 774 aa26.93■■□□□ 1.9
RAD23A-204ENST00000588329 NWD1Q149M9 1564 aa26.92■■□□□ 1.9
RAD23A-204ENST00000588329 NKTRP30414 1462 aaKnown RBP26.91■■□□□ 1.9
RAD23A-204ENST00000588329 CLTCL1P53675 1640 aa26.9■■□□□ 1.9
RAD23A-204ENST00000588329 RGS17Q9UGC6 210 aaPredicted RBP26.89■■□□□ 1.9
RAD23A-204ENST00000588329 MSH6P52701 1360 aa26.88■■□□□ 1.89
RAD23A-204ENST00000588329 CHD2O14647 1828 aaKnown RBP26.87■■□□□ 1.89
RAD23A-204ENST00000588329 TRPM2O94759 1503 aa26.86■■□□□ 1.89
RAD23A-204ENST00000588329 PCGF6Q9BYE7 350 aa26.86■■□□□ 1.89
RAD23A-204ENST00000588329 AMOTL2Q9Y2J4 779 aa26.86■■□□□ 1.89
RAD23A-204ENST00000588329 PTPRUQ92729 1446 aa26.82■■□□□ 1.88
RAD23A-204ENST00000588329 SLAIN2Q9P270 581 aa26.81■■□□□ 1.88
RAD23A-204ENST00000588329 FAM135BQ49AJ0 1406 aa26.8■■□□□ 1.88
RAD23A-204ENST00000588329 SETD5Q9C0A6 1442 aa26.8■■□□□ 1.88
RAD23A-204ENST00000588329 DIP2AQ14689 1571 aa26.8■■□□□ 1.88
RAD23A-204ENST00000588329 ACIN1Q9UKV3 1341 aaKnown RBP26.79■■□□□ 1.88
RAD23A-204ENST00000588329 MPHOSPH9Q99550 1183 aa26.78■■□□□ 1.88
RAD23A-204ENST00000588329 METP08581 1390 aa26.78■■□□□ 1.88
RAD23A-204ENST00000588329 NEXMIFQ5QGS0 1516 aa26.78■■□□□ 1.88
RAD23A-204ENST00000588329 NRXN3Q9Y4C0 1643 aa26.78■■□□□ 1.88
RAD23A-204ENST00000588329 KIF1BO60333 1816 aa26.78■■□□□ 1.88
RAD23A-204ENST00000588329 ROBO1Q9Y6N7 1651 aa26.77■■□□□ 1.88
RAD23A-204ENST00000588329 PIK3R4Q99570 1358 aa26.77■■□□□ 1.88
RAD23A-204ENST00000588329 ATF3P18847 181 aa26.74■■□□□ 1.87
RAD23A-204ENST00000588329 RGL3Q3MIN7 710 aa26.74■■□□□ 1.87
RAD23A-204ENST00000588329 SETBP1Q9Y6X0 1596 aa26.74■■□□□ 1.87
RAD23A-204ENST00000588329 C19orf44Q9H6X5 657 aa26.73■■□□□ 1.87
RAD23A-204ENST00000588329 SETD1AO15047 1707 aaKnown RBP26.72■■□□□ 1.87
RAD23A-204ENST00000588329 VGFO15240 615 aaPredicted RBP26.71■■□□□ 1.87
RAD23A-204ENST00000588329 POTEAQ6S8J7 498 aa26.7■■□□□ 1.86
RAD23A-204ENST00000588329 RAB3GAP2Q9H2M9 1393 aa26.7■■□□□ 1.86
RAD23A-204ENST00000588329 CADPS2Q86UW7 1296 aa26.69■■□□□ 1.86
RAD23A-204ENST00000588329 CCDC144AA2RUR9 1427 aa26.67■■□□□ 1.86
RAD23A-204ENST00000588329 NCOA3Q9Y6Q9 1424 aa26.67■■□□□ 1.86
RAD23A-204ENST00000588329 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.67■■□□□ 1.86
RAD23A-204ENST00000588329 HRCP23327 699 aa26.66■■□□□ 1.86
RAD23A-204ENST00000588329 RPGRIP1LQ68CZ1 1315 aa26.65■■□□□ 1.86
RAD23A-204ENST00000588329 XRN1Q8IZH2 1706 aaKnown RBP26.65■■□□□ 1.86
RAD23A-204ENST00000588329 PHLPP1O60346 1717 aa26.61■■□□□ 1.85
RAD23A-204ENST00000588329 ADGRF5Q8IZF2 1346 aa26.61■■□□□ 1.85
RAD23A-204ENST00000588329 BRINP3Q76B58 766 aa26.58■■□□□ 1.85
RAD23A-204ENST00000588329 PPLO60437 1756 aa26.57■■□□□ 1.84
RAD23A-204ENST00000588329 ROBO2Q9HCK4 1378 aa26.56■■□□□ 1.84
RAD23A-204ENST00000588329 STK26Q9P289 416 aa26.55■■□□□ 1.84
RAD23A-204ENST00000588329 SPATA31E1Q6ZUB1 1445 aa26.55■■□□□ 1.84
RAD23A-204ENST00000588329 DDX17Q92841 729 aaKnown RBP26.53■■□□□ 1.84
RAD23A-204ENST00000588329 JCADQ9P266 1359 aa26.53■■□□□ 1.84
RAD23A-204ENST00000588329 ADGRL3Q9HAR2 1447 aa26.53■■□□□ 1.84
RAD23A-204ENST00000588329 MST1RQ04912 1400 aa26.51■■□□□ 1.83
RAD23A-204ENST00000588329 TMEM132EQ6IEE7 984 aa26.51■■□□□ 1.83
RAD23A-204ENST00000588329 COL16A1Q07092 1604 aaPredicted RBP26.5■■□□□ 1.83
RAD23A-204ENST00000588329 DCCP43146 1447 aa26.5■■□□□ 1.83
RAD23A-204ENST00000588329 NALCNQ8IZF0 1738 aa26.49■■□□□ 1.83
RAD23A-204ENST00000588329 ANKRD30BQ9BXX2 1392 aa26.47■■□□□ 1.83
RAD23A-204ENST00000588329 PTCH1Q13635 1447 aa26.47■■□□□ 1.83
RAD23A-204ENST00000588329 ASXL1Q8IXJ9 1541 aa26.46■■□□□ 1.83
RAD23A-204ENST00000588329 NUTM2BA6NNL0 878 aaPredicted RBP26.45■■□□□ 1.82
RAD23A-204ENST00000588329 NUTM2EB1AL46 878 aaPredicted RBP26.45■■□□□ 1.82
RAD23A-204ENST00000588329 WAPLQ7Z5K2 1190 aa26.45■■□□□ 1.82
RAD23A-204ENST00000588329 NUTM2AQ8IVF1 878 aaPredicted RBP26.45■■□□□ 1.82
RAD23A-204ENST00000588329 AHDC1Q5TGY3 1603 aaPredicted RBP26.44■■□□□ 1.82
RAD23A-204ENST00000588329 MEX3CQ5U5Q3 659 aaKnown RBP26.44■■□□□ 1.82
RAD23A-204ENST00000588329 ORAI2Q96SN7 254 aa26.42■■□□□ 1.82
RAD23A-204ENST00000588329 NUTM2FA1L443 756 aa26.41■■□□□ 1.82
RAD23A-204ENST00000588329 IFT172Q9UG01 1749 aa26.41■■□□□ 1.82
RAD23A-204ENST00000588329 C1orf167Q5SNV9 1468 aa26.4■■□□□ 1.82
RAD23A-204ENST00000588329 PIK3C2GO75747 1445 aa26.39■■□□□ 1.82
RAD23A-204ENST00000588329 LRP6O75581 1613 aa26.39■■□□□ 1.82
RAD23A-204ENST00000588329 CFAP70Q5T0N1 1121 aa26.39■■□□□ 1.82
RAD23A-204ENST00000588329 PLEKHH1Q9ULM0 1364 aa26.38■■□□□ 1.81
RAD23A-204ENST00000588329 KDM2AQ9Y2K7 1162 aa26.38■■□□□ 1.81
RAD23A-204ENST00000588329 SPATA31A6Q5VVP1 1343 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms