RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 TMEM131LA2VDJ0 1609 aa22.49■■□□□ 1.19
HDAC5-207ENST00000588261 TMEM94Q12767 1356 aa22.49■■□□□ 1.19
HDAC5-207ENST00000588261 E9PCH4 1651 aa22.49■■□□□ 1.19
HDAC5-207ENST00000588261 RBM33Q96EV2 1170 aaKnown RBP22.48■■□□□ 1.19
HDAC5-207ENST00000588261 GCC2Q8IWJ2 1684 aa22.48■■□□□ 1.19
HDAC5-207ENST00000588261 NWD1Q149M9 1564 aa22.47■■□□□ 1.19
HDAC5-207ENST00000588261 KCNA6P17658 529 aa22.47■■□□□ 1.19
HDAC5-207ENST00000588261 IQGAP3Q86VI3 1631 aa22.45■■□□□ 1.18
HDAC5-207ENST00000588261 RIMS2Q9UQ26 1411 aa22.43■■□□□ 1.18
HDAC5-207ENST00000588261 PLEKHG1Q9ULL1 1385 aa22.42■■□□□ 1.18
HDAC5-207ENST00000588261 NKTRP30414 1462 aaKnown RBP22.4■■□□□ 1.18
HDAC5-207ENST00000588261 FAM135BQ49AJ0 1406 aa22.4■■□□□ 1.18
HDAC5-207ENST00000588261 ITGAEP38570 1179 aa22.39■■□□□ 1.17
HDAC5-207ENST00000588261 ADAMTS13Q76LX8 1427 aa22.39■■□□□ 1.17
HDAC5-207ENST00000588261 NUTM2DQ5VT03 806 aaPredicted RBP22.37■■□□□ 1.17
HDAC5-207ENST00000588261 PROSER2Q86WR7 435 aaPredicted RBP22.37■■□□□ 1.17
HDAC5-207ENST00000588261 NUP155O75694 1391 aa22.37■■□□□ 1.17
HDAC5-207ENST00000588261 CHD2O14647 1828 aaKnown RBP22.36■■□□□ 1.17
HDAC5-207ENST00000588261 RGS17Q9UGC6 210 aaPredicted RBP22.35■■□□□ 1.17
HDAC5-207ENST00000588261 HFM1A2PYH4 1435 aa22.34■■□□□ 1.17
HDAC5-207ENST00000588261 ROBO1Q9Y6N7 1651 aa22.34■■□□□ 1.17
HDAC5-207ENST00000588261 CHGAP10645 457 aaKnown RBP22.32■■□□□ 1.16
HDAC5-207ENST00000588261 BCANQ96GW7 911 aa22.31■■□□□ 1.16
HDAC5-207ENST00000588261 TBX22Q9Y458 520 aa22.31■■□□□ 1.16
HDAC5-207ENST00000588261 TRIM26Q12899 539 aaPredicted RBP22.3■■□□□ 1.16
HDAC5-207ENST00000588261 PPP1R15AO75807 674 aaPredicted RBP22.29■■□□□ 1.16
HDAC5-207ENST00000588261 NAIPQ13075 1403 aa22.29■■□□□ 1.16
HDAC5-207ENST00000588261 PTPRUQ92729 1446 aa22.29■■□□□ 1.16
HDAC5-207ENST00000588261 NRXN3Q9Y4C0 1643 aa22.28■■□□□ 1.16
HDAC5-207ENST00000588261 HDGFP51858 240 aaKnown RBP22.26■■□□□ 1.15
HDAC5-207ENST00000588261 MSH6P52701 1360 aa22.25■■□□□ 1.15
HDAC5-207ENST00000588261 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.25■■□□□ 1.15
HDAC5-207ENST00000588261 SPHKAPQ2M3C7 1700 aa22.25■■□□□ 1.15
HDAC5-207ENST00000588261 DIP2AQ14689 1571 aa22.25■■□□□ 1.15
HDAC5-207ENST00000588261 SLAIN2Q9P270 581 aa22.23■■□□□ 1.15
HDAC5-207ENST00000588261 ACIN1Q9UKV3 1341 aaKnown RBP22.22■■□□□ 1.15
HDAC5-207ENST00000588261 CLTCL1P53675 1640 aa22.21■■□□□ 1.15
HDAC5-207ENST00000588261 PIK3R4Q99570 1358 aa22.21■■□□□ 1.15
HDAC5-207ENST00000588261 NCOA3Q9Y6Q9 1424 aa22.2■■□□□ 1.14
HDAC5-207ENST00000588261 SETBP1Q9Y6X0 1596 aa22.2■■□□□ 1.14
HDAC5-207ENST00000588261 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.19■■□□□ 1.14
HDAC5-207ENST00000588261 PHLPP1O60346 1717 aa22.18■■□□□ 1.14
HDAC5-207ENST00000588261 XRN1Q8IZH2 1706 aaKnown RBP22.18■■□□□ 1.14
HDAC5-207ENST00000588261 COL16A1Q07092 1604 aaPredicted RBP22.18■■□□□ 1.14
HDAC5-207ENST00000588261 TRPM2O94759 1503 aa22.18■■□□□ 1.14
HDAC5-207ENST00000588261 SETD5Q9C0A6 1442 aa22.18■■□□□ 1.14
HDAC5-207ENST00000588261 POTEAQ6S8J7 498 aa22.18■■□□□ 1.14
HDAC5-207ENST00000588261 AMOTL2Q9Y2J4 779 aa22.17■■□□□ 1.14
HDAC5-207ENST00000588261 NEXMIFQ5QGS0 1516 aa22.16■■□□□ 1.14
HDAC5-207ENST00000588261 METP08581 1390 aa22.16■■□□□ 1.14
HDAC5-207ENST00000588261 JCADQ9P266 1359 aa22.14■■□□□ 1.14
HDAC5-207ENST00000588261 HRCP23327 699 aa22.13■■□□□ 1.13
HDAC5-207ENST00000588261 C19orf44Q9H6X5 657 aa22.12■■□□□ 1.13
HDAC5-207ENST00000588261 LRP6O75581 1613 aa22.11■■□□□ 1.13
HDAC5-207ENST00000588261 AHDC1Q5TGY3 1603 aaPredicted RBP22.1■■□□□ 1.13
HDAC5-207ENST00000588261 C14orf37Q86TY3 774 aa22.09■■□□□ 1.13
HDAC5-207ENST00000588261 RAB3GAP2Q9H2M9 1393 aa22.09■■□□□ 1.13
HDAC5-207ENST00000588261 ZNF326Q5BKZ1 582 aaKnown RBP22.08■■□□□ 1.13
HDAC5-207ENST00000588261 BRINP3Q76B58 766 aa22.07■■□□□ 1.12
HDAC5-207ENST00000588261 CADPS2Q86UW7 1296 aa22.07■■□□□ 1.12
HDAC5-207ENST00000588261 MST1RQ04912 1400 aa22.06■■□□□ 1.12
HDAC5-207ENST00000588261 SETD1AO15047 1707 aaKnown RBP22.06■■□□□ 1.12
HDAC5-207ENST00000588261 SPATA31A6Q5VVP1 1343 aa22.06■■□□□ 1.12
HDAC5-207ENST00000588261 ATF3P18847 181 aa22.05■■□□□ 1.12
HDAC5-207ENST00000588261 DCCP43146 1447 aa22.05■■□□□ 1.12
HDAC5-207ENST00000588261 ASXL1Q8IXJ9 1541 aa22.02■■□□□ 1.12
HDAC5-207ENST00000588261 KIF1BO60333 1816 aa22.02■■□□□ 1.12
HDAC5-207ENST00000588261 MEX3CQ5U5Q3 659 aaKnown RBP22.02■■□□□ 1.12
HDAC5-207ENST00000588261 ZNF772Q68DY9 489 aaPredicted RBP22.02■■□□□ 1.12
HDAC5-207ENST00000588261 NALCNQ8IZF0 1738 aa22.02■■□□□ 1.12
HDAC5-207ENST00000588261 ADGRL3Q9HAR2 1447 aa22■■□□□ 1.11
HDAC5-207ENST00000588261 FOXD1Q16676 465 aa22■■□□□ 1.11
HDAC5-207ENST00000588261 TRIM52Q96A61 297 aa22■■□□□ 1.11
HDAC5-207ENST00000588261 SHPRHQ149N8 1683 aa22■■□□□ 1.11
HDAC5-207ENST00000588261 NHSL1Q5SYE7 1610 aa21.98■■□□□ 1.11
HDAC5-207ENST00000588261 ROBO2Q9HCK4 1378 aa21.98■■□□□ 1.11
HDAC5-207ENST00000588261 DDX17Q92841 729 aaKnown RBP21.97■■□□□ 1.11
HDAC5-207ENST00000588261 SLC4A1APQ9BWU0 796 aaKnown RBP21.97■■□□□ 1.11
HDAC5-207ENST00000588261 PPLO60437 1756 aa21.95■■□□□ 1.1
HDAC5-207ENST00000588261 PCGF6Q9BYE7 350 aa21.95■■□□□ 1.1
HDAC5-207ENST00000588261 PTCH1Q13635 1447 aa21.95■■□□□ 1.1
HDAC5-207ENST00000588261 PRAG1Q86YV5 1406 aa21.95■■□□□ 1.1
HDAC5-207ENST00000588261 C1orf167Q5SNV9 1468 aa21.91■■□□□ 1.1
HDAC5-207ENST00000588261 SPATA31E1Q6ZUB1 1445 aa21.9■■□□□ 1.1
HDAC5-207ENST00000588261 RPGRIP1LQ68CZ1 1315 aa21.9■■□□□ 1.1
HDAC5-207ENST00000588261 VGFO15240 615 aaPredicted RBP21.9■■□□□ 1.1
HDAC5-207ENST00000588261 ADGRF5Q8IZF2 1346 aa21.89■■□□□ 1.1
HDAC5-207ENST00000588261 RXRBP28702 533 aa21.89■■□□□ 1.09
HDAC5-207ENST00000588261 UPF1Q92900 1129 aaKnown RBP eCLIP21.87■■□□□ 1.099e-6■□□□□ 11.1
HDAC5-207ENST00000588261 MPHOSPH9Q99550 1183 aa21.87■■□□□ 1.09
HDAC5-207ENST00000588261 LAMC1P11047 1609 aa21.87■■□□□ 1.09
HDAC5-207ENST00000588261 PNPLA6Q8IY17 1366 aa21.87■■□□□ 1.09
HDAC5-207ENST00000588261 NUTM2BA6NNL0 878 aaPredicted RBP21.85■■□□□ 1.09
HDAC5-207ENST00000588261 NUTM2EB1AL46 878 aaPredicted RBP21.85■■□□□ 1.09
HDAC5-207ENST00000588261 NUTM2AQ8IVF1 878 aaPredicted RBP21.85■■□□□ 1.09
HDAC5-207ENST00000588261 ORAI2Q96SN7 254 aa21.85■■□□□ 1.09
HDAC5-207ENST00000588261 IFT172Q9UG01 1749 aa21.84■■□□□ 1.09
HDAC5-207ENST00000588261 LRRC59Q96AG4 307 aaKnown RBP21.84■■□□□ 1.09
HDAC5-207ENST00000588261 CDK12Q9NYV4 1490 aaPredicted RBP21.83■■□□□ 1.09
HDAC5-207ENST00000588261 CCDC144AA2RUR9 1427 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms