RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

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Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 RIMS2Q9UQ26 1411 aa35.11■■■■□ 3.21
LSM7-204ENST00000587502 LRRC7Q96NW7 1537 aa35.11■■■■□ 3.21
LSM7-204ENST00000587502 PPP1R15AO75807 674 aaPredicted RBP35.1■■■■□ 3.21
LSM7-204ENST00000587502 BCANQ96GW7 911 aa35.1■■■■□ 3.21
LSM7-204ENST00000587502 MYO5BQ9ULV0 1848 aa35.09■■■■□ 3.21
LSM7-204ENST00000587502 SLC26A8Q96RN1 970 aa35.07■■■■□ 3.2
LSM7-204ENST00000587502 PLEKHG1Q9ULL1 1385 aa35.07■■■■□ 3.2
LSM7-204ENST00000587502 KCNA6P17658 529 aa35.05■■■■□ 3.2
LSM7-204ENST00000587502 TRIM52Q96A61 297 aa35.05■■■■□ 3.2
LSM7-204ENST00000587502 SPHKAPQ2M3C7 1700 aa35.03■■■■□ 3.2
LSM7-204ENST00000587502 SCAF1Q9H7N4 1312 aaKnown RBP35.01■■■■□ 3.19
LSM7-204ENST00000587502 PIP4K2BP78356 416 aa35■■■■□ 3.19
LSM7-204ENST00000587502 TBX22Q9Y458 520 aa34.96■■■■□ 3.19
LSM7-204ENST00000587502 SLC4A1APQ9BWU0 796 aaKnown RBP34.94■■■■□ 3.18
LSM7-204ENST00000587502 TRPM2O94759 1503 aa34.93■■■■□ 3.18
LSM7-204ENST00000587502 ACIN1Q9UKV3 1341 aaKnown RBP34.91■■■■□ 3.18
LSM7-204ENST00000587502 PROSER2Q86WR7 435 aaPredicted RBP34.91■■■■□ 3.18
LSM7-204ENST00000587502 NKTRP30414 1462 aaKnown RBP34.9■■■■□ 3.18
LSM7-204ENST00000587502 NUTM2DQ5VT03 806 aaPredicted RBP34.9■■■■□ 3.18
LSM7-204ENST00000587502 NWD1Q149M9 1564 aa34.9■■■■□ 3.18
LSM7-204ENST00000587502 ZNF326Q5BKZ1 582 aaKnown RBP34.89■■■■□ 3.18
LSM7-204ENST00000587502 TMEM94Q12767 1356 aa34.88■■■■□ 3.17
LSM7-204ENST00000587502 SENP3Q9H4L4 574 aaPredicted RBP34.88■■■■□ 3.17
LSM7-204ENST00000587502 ALKQ9UM73 1620 aa34.88■■■■□ 3.17
LSM7-204ENST00000587502 DIP2AQ14689 1571 aa34.87■■■■□ 3.17
LSM7-204ENST00000587502 XIRP1Q702N8 1843 aaKnown RBP34.85■■■■□ 3.17
LSM7-204ENST00000587502 PIK3R4Q99570 1358 aa34.85■■■■□ 3.17
LSM7-204ENST00000587502 CLTCL1P53675 1640 aa34.84■■■■□ 3.17
LSM7-204ENST00000587502 ADAMTS13Q76LX8 1427 aa34.84■■■■□ 3.17
LSM7-204ENST00000587502 HSPA1LP34931 641 aa34.84■■■■□ 3.17
LSM7-204ENST00000587502 CHD2O14647 1828 aaKnown RBP34.83■■■■□ 3.17
LSM7-204ENST00000587502 KIF1BO60333 1816 aa34.8■■■■□ 3.16
LSM7-204ENST00000587502 MSH6P52701 1360 aa34.74■■■■□ 3.15
LSM7-204ENST00000587502 SETD5Q9C0A6 1442 aa34.74■■■■□ 3.15
LSM7-204ENST00000587502 NCOA3Q9Y6Q9 1424 aa34.74■■■■□ 3.15
LSM7-204ENST00000587502 MPHOSPH9Q99550 1183 aa34.74■■■■□ 3.15
LSM7-204ENST00000587502 SETBP1Q9Y6X0 1596 aa34.74■■■■□ 3.15
LSM7-204ENST00000587502 RBM33Q96EV2 1170 aaKnown RBP34.73■■■■□ 3.15
LSM7-204ENST00000587502 NEXMIFQ5QGS0 1516 aa34.71■■■■□ 3.15
LSM7-204ENST00000587502 RPGRIP1LQ68CZ1 1315 aa34.71■■■■□ 3.15
LSM7-204ENST00000587502 VGFO15240 615 aaPredicted RBP34.69■■■■□ 3.14
LSM7-204ENST00000587502 FAM135BQ49AJ0 1406 aa34.69■■■■□ 3.14
LSM7-204ENST00000587502 AMOTL2Q9Y2J4 779 aa34.68■■■■□ 3.14
LSM7-204ENST00000587502 FOXD1Q16676 465 aa34.67■■■■□ 3.14
LSM7-204ENST00000587502 NRXN3Q9Y4C0 1643 aa34.66■■■■□ 3.14
LSM7-204ENST00000587502 CCDC144AA2RUR9 1427 aa34.64■■■■□ 3.14
LSM7-204ENST00000587502 C14orf37Q86TY3 774 aa34.63■■■■□ 3.13
LSM7-204ENST00000587502 PTPRUQ92729 1446 aa34.61■■■■□ 3.13
LSM7-204ENST00000587502 C19orf44Q9H6X5 657 aa34.59■■■■□ 3.13
LSM7-204ENST00000587502 SLAIN2Q9P270 581 aa34.59■■■■□ 3.13
LSM7-204ENST00000587502 METP08581 1390 aa34.57■■■■□ 3.12
LSM7-204ENST00000587502 RAB3GAP2Q9H2M9 1393 aa34.57■■■■□ 3.12
LSM7-204ENST00000587502 CADPS2Q86UW7 1296 aa34.56■■■■□ 3.12
LSM7-204ENST00000587502 XRN1Q8IZH2 1706 aaKnown RBP34.53■■■■□ 3.12
LSM7-204ENST00000587502 ATF3P18847 181 aa34.53■■■■□ 3.12
LSM7-204ENST00000587502 ROBO1Q9Y6N7 1651 aa34.52■■■■□ 3.12
LSM7-204ENST00000587502 PPLO60437 1756 aa34.51■■■■□ 3.11
LSM7-204ENST00000587502 HRCP23327 699 aa34.49■■■■□ 3.11
LSM7-204ENST00000587502 SPATA31E1Q6ZUB1 1445 aa34.48■■■■□ 3.11
LSM7-204ENST00000587502 RGL3Q3MIN7 710 aa34.47■■■■□ 3.11
LSM7-204ENST00000587502 MED1Q15648 1581 aaPredicted RBP34.47■■■■□ 3.11
LSM7-204ENST00000587502 ANKRD30BQ9BXX2 1392 aa34.47■■■■□ 3.11
LSM7-204ENST00000587502 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.47■■■■□ 3.11
LSM7-204ENST00000587502 DCCP43146 1447 aa34.45■■■■□ 3.11
LSM7-204ENST00000587502 SETD1AO15047 1707 aaKnown RBP34.39■■■■□ 3.1
LSM7-204ENST00000587502 PTCH1Q13635 1447 aa34.38■■■■□ 3.09
LSM7-204ENST00000587502 ADGRF5Q8IZF2 1346 aa34.37■■■■□ 3.09
LSM7-204ENST00000587502 PRAG1Q86YV5 1406 aa34.36■■■■□ 3.09
LSM7-204ENST00000587502 PHF23Q9BUL5 403 aaPredicted RBP34.35■■■■□ 3.09
LSM7-204ENST00000587502 ADGRL3Q9HAR2 1447 aa34.35■■■■□ 3.09
LSM7-204ENST00000587502 IFT172Q9UG01 1749 aa34.33■■■■□ 3.09
LSM7-204ENST00000587502 PHLPP1O60346 1717 aa34.32■■■■□ 3.08
LSM7-204ENST00000587502 ROBO2Q9HCK4 1378 aa34.29■■■■□ 3.08
LSM7-204ENST00000587502 BRINP3Q76B58 766 aa34.27■■■■□ 3.08
LSM7-204ENST00000587502 PIK3C2GO75747 1445 aa34.27■■■■□ 3.08
LSM7-204ENST00000587502 JCADQ9P266 1359 aa34.26■■■■□ 3.08
LSM7-204ENST00000587502 MST1RQ04912 1400 aa34.26■■■■□ 3.07
LSM7-204ENST00000587502 AHDC1Q5TGY3 1603 aaPredicted RBP34.24■■■■□ 3.07
LSM7-204ENST00000587502 NALCNQ8IZF0 1738 aa34.23■■■■□ 3.07
LSM7-204ENST00000587502 MYOM2P54296 1465 aa34.21■■■■□ 3.07
LSM7-204ENST00000587502 COL16A1Q07092 1604 aaPredicted RBP34.21■■■■□ 3.07
LSM7-204ENST00000587502 LRPPRCP42704 1394 aaKnown RBP34.2■■■■□ 3.07
LSM7-204ENST00000587502 C14orf93Q9H972 538 aaKnown RBP34.18■■■■□ 3.06
LSM7-204ENST00000587502 ABCC11Q96J66 1382 aa34.18■■■■□ 3.06
LSM7-204ENST00000587502 TECPR2O15040 1411 aa34.18■■■■□ 3.06
LSM7-204ENST00000587502 NRXN1Q9ULB1 1477 aa34.18■■■■□ 3.06
LSM7-204ENST00000587502 ASXL1Q8IXJ9 1541 aa34.18■■■■□ 3.06
LSM7-204ENST00000587502 STK26Q9P289 416 aa34.17■■■■□ 3.06
LSM7-204ENST00000587502 TMEM132EQ6IEE7 984 aa34.15■■■■□ 3.06
LSM7-204ENST00000587502 STAC3Q96MF2 364 aa34.15■■■■□ 3.06
LSM7-204ENST00000587502 SPATA31A6Q5VVP1 1343 aa34.13■■■■□ 3.05
LSM7-204ENST00000587502 C1orf167Q5SNV9 1468 aa34.13■■■■□ 3.05
LSM7-204ENST00000587502 YTHDC2Q9H6S0 1430 aaKnown RBP34.12■■■■□ 3.05
LSM7-204ENST00000587502 LAMC1P11047 1609 aa34.12■■■■□ 3.05
LSM7-204ENST00000587502 SIRT1Q96EB6 747 aa34.11■■■■□ 3.05
LSM7-204ENST00000587502 KNDC1Q76NI1 1749 aa34.1■■■■□ 3.05
LSM7-204ENST00000587502 DHX57Q6P158 1386 aaKnown RBP34.1■■■■□ 3.05
LSM7-204ENST00000587502 CFAP70Q5T0N1 1121 aa34.09■■■■□ 3.05
LSM7-204ENST00000587502 WAPLQ7Z5K2 1190 aa34.07■■■■□ 3.04
LSM7-204ENST00000587502 LRRC59Q96AG4 307 aaKnown RBP34.07■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms