RNA–Protein interactions for RNA: ENST00000587486.6

CALR-205, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 957 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-205ENST00000587486 LRRC7Q96NW7 1537 aa25.08■■□□□ 1.61
CALR-205ENST00000587486 SLC4A1APQ9BWU0 796 aaKnown RBP25.08■■□□□ 1.61
CALR-205ENST00000587486 NWD1Q149M9 1564 aa25.07■■□□□ 1.6
CALR-205ENST00000587486 KIF1BO60333 1816 aa25.05■■□□□ 1.6
CALR-205ENST00000587486 CHGAP10645 457 aaKnown RBP25.05■■□□□ 1.6
CALR-205ENST00000587486 NEXMIFQ5QGS0 1516 aa25.04■■□□□ 1.6
CALR-205ENST00000587486 XIRP1Q702N8 1843 aaKnown RBP25.04■■□□□ 1.6
CALR-205ENST00000587486 RAB3GAP2Q9H2M9 1393 aa25.04■■□□□ 1.6
CALR-205ENST00000587486 ALKQ9UM73 1620 aa25.03■■□□□ 1.6
CALR-205ENST00000587486 ADAMTS13Q76LX8 1427 aa25.03■■□□□ 1.6
CALR-205ENST00000587486 DIP2AQ14689 1571 aa25.02■■□□□ 1.6
CALR-205ENST00000587486 NRXN3Q9Y4C0 1643 aa25.02■■□□□ 1.6
CALR-205ENST00000587486 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.02■■□□□ 1.6
CALR-205ENST00000587486 SLC26A8Q96RN1 970 aa25.01■■□□□ 1.59
CALR-205ENST00000587486 MPHOSPH9Q99550 1183 aa25■■□□□ 1.59
CALR-205ENST00000587486 CHD2O14647 1828 aaKnown RBP24.99■■□□□ 1.59
CALR-205ENST00000587486 HDGFP51858 240 aaKnown RBP24.99■■□□□ 1.59
CALR-205ENST00000587486 FOXD1Q16676 465 aa24.99■■□□□ 1.59
CALR-205ENST00000587486 ACIN1Q9UKV3 1341 aaKnown RBP24.99■■□□□ 1.59
CALR-205ENST00000587486 SETBP1Q9Y6X0 1596 aa24.99■■□□□ 1.59
CALR-205ENST00000587486 PPP1R15AO75807 674 aaPredicted RBP24.98■■□□□ 1.59
CALR-205ENST00000587486 NKTRP30414 1462 aaKnown RBP24.97■■□□□ 1.59
CALR-205ENST00000587486 NUTM2DQ5VT03 806 aaPredicted RBP24.97■■□□□ 1.59
CALR-205ENST00000587486 KCNA6P17658 529 aa24.94■■□□□ 1.58
CALR-205ENST00000587486 UBAP1LF5GYI3 381 aa24.93■■□□□ 1.58
CALR-205ENST00000587486 TBX22Q9Y458 520 aa24.93■■□□□ 1.58
CALR-205ENST00000587486 PPLO60437 1756 aa24.93■■□□□ 1.58
CALR-205ENST00000587486 SENP3Q9H4L4 574 aaPredicted RBP24.92■■□□□ 1.58
CALR-205ENST00000587486 SPATA31E1Q6ZUB1 1445 aa24.91■■□□□ 1.58
CALR-205ENST00000587486 CCDC144AA2RUR9 1427 aa24.9■■□□□ 1.58
CALR-205ENST00000587486 PIK3R4Q99570 1358 aa24.9■■□□□ 1.58
CALR-205ENST00000587486 ZNF326Q5BKZ1 582 aaKnown RBP24.89■■□□□ 1.58
CALR-205ENST00000587486 HRCP23327 699 aa24.88■■□□□ 1.57
CALR-205ENST00000587486 BCANQ96GW7 911 aa24.88■■□□□ 1.57
CALR-205ENST00000587486 SETD1AO15047 1707 aaKnown RBP24.88■■□□□ 1.57
CALR-205ENST00000587486 XRN1Q8IZH2 1706 aaKnown RBP24.88■■□□□ 1.57
CALR-205ENST00000587486 IFT172Q9UG01 1749 aa24.88■■□□□ 1.57
CALR-205ENST00000587486 TMEM94Q12767 1356 aa24.88■■□□□ 1.57
CALR-205ENST00000587486 PTPRUQ92729 1446 aa24.86■■□□□ 1.57
CALR-205ENST00000587486 TOM1O60784 492 aa24.84■■□□□ 1.57
CALR-205ENST00000587486 RPGRIP1LQ68CZ1 1315 aa24.84■■□□□ 1.57
CALR-205ENST00000587486 METP08581 1390 aa24.8■■□□□ 1.56
CALR-205ENST00000587486 PROSER2Q86WR7 435 aaPredicted RBP24.79■■□□□ 1.56
CALR-205ENST00000587486 RBM33Q96EV2 1170 aaKnown RBP24.78■■□□□ 1.56
CALR-205ENST00000587486 ANKRD30BQ9BXX2 1392 aa24.78■■□□□ 1.56
CALR-205ENST00000587486 NCOA3Q9Y6Q9 1424 aa24.78■■□□□ 1.56
CALR-205ENST00000587486 VGFO15240 615 aaPredicted RBP24.77■■□□□ 1.56
CALR-205ENST00000587486 PIP4K2BP78356 416 aa24.76■■□□□ 1.55
CALR-205ENST00000587486 AMOTL2Q9Y2J4 779 aa24.74■■□□□ 1.55
CALR-205ENST00000587486 PRAG1Q86YV5 1406 aa24.74■■□□□ 1.55
CALR-205ENST00000587486 NRXN1Q9ULB1 1477 aa24.7■■□□□ 1.55
CALR-205ENST00000587486 PIK3C2GO75747 1445 aa24.7■■□□□ 1.55
CALR-205ENST00000587486 MSH6P52701 1360 aa24.7■■□□□ 1.55
CALR-205ENST00000587486 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.7■■□□□ 1.54
CALR-205ENST00000587486 ADGRF5Q8IZF2 1346 aa24.7■■□□□ 1.54
CALR-205ENST00000587486 SCAF1Q9H7N4 1312 aaKnown RBP24.7■■□□□ 1.54
CALR-205ENST00000587486 RGL3Q3MIN7 710 aa24.7■■□□□ 1.54
CALR-205ENST00000587486 MYOM2P54296 1465 aa24.69■■□□□ 1.54
CALR-205ENST00000587486 ASXL1Q8IXJ9 1541 aa24.68■■□□□ 1.54
CALR-205ENST00000587486 HSPA1LP34931 641 aa24.68■■□□□ 1.54
CALR-205ENST00000587486 PTCH1Q13635 1447 aa24.68■■□□□ 1.54
CALR-205ENST00000587486 FAM135BQ49AJ0 1406 aa24.68■■□□□ 1.54
CALR-205ENST00000587486 ROBO1Q9Y6N7 1651 aa24.67■■□□□ 1.54
CALR-205ENST00000587486 NALCNQ8IZF0 1738 aa24.65■■□□□ 1.54
CALR-205ENST00000587486 DCCP43146 1447 aa24.64■■□□□ 1.54
CALR-205ENST00000587486 ROBO2Q9HCK4 1378 aa24.61■■□□□ 1.53
CALR-205ENST00000587486 KNDC1Q76NI1 1749 aa24.61■■□□□ 1.53
CALR-205ENST00000587486 LAMC1P11047 1609 aa24.61■■□□□ 1.53
CALR-205ENST00000587486 ADGRL3Q9HAR2 1447 aa24.61■■□□□ 1.53
CALR-205ENST00000587486 C19orf44Q9H6X5 657 aa24.6■■□□□ 1.53
CALR-205ENST00000587486 TECPR2O15040 1411 aa24.59■■□□□ 1.53
CALR-205ENST00000587486 SLAIN2Q9P270 581 aa24.57■■□□□ 1.52
CALR-205ENST00000587486 DHX57Q6P158 1386 aaKnown RBP24.54■■□□□ 1.52
CALR-205ENST00000587486 C14orf37Q86TY3 774 aa24.54■■□□□ 1.52
CALR-205ENST00000587486 CADPS2Q86UW7 1296 aa24.54■■□□□ 1.52
CALR-205ENST00000587486 LRPPRCP42704 1394 aaKnown RBP24.54■■□□□ 1.52
CALR-205ENST00000587486 MST1RQ04912 1400 aa24.53■■□□□ 1.52
CALR-205ENST00000587486 C14orf93Q9H972 538 aaKnown RBP24.52■■□□□ 1.52
CALR-205ENST00000587486 ADGRB1O14514 1584 aa24.51■■□□□ 1.51
CALR-205ENST00000587486 ABCC11Q96J66 1382 aa24.51■■□□□ 1.51
CALR-205ENST00000587486 MED1Q15648 1581 aaPredicted RBP24.5■■□□□ 1.51
CALR-205ENST00000587486 ATF3P18847 181 aa24.5■■□□□ 1.51
CALR-205ENST00000587486 YTHDC2Q9H6S0 1430 aaKnown RBP24.5■■□□□ 1.51
CALR-205ENST00000587486 COL16A1Q07092 1604 aaPredicted RBP24.5■■□□□ 1.51
CALR-205ENST00000587486 AHDC1Q5TGY3 1603 aaPredicted RBP24.5■■□□□ 1.51
CALR-205ENST00000587486 PHLPP1O60346 1717 aa24.49■■□□□ 1.51
CALR-205ENST00000587486 CDC42BPGQ6DT37 1551 aa24.48■■□□□ 1.51
CALR-205ENST00000587486 TMEM132EQ6IEE7 984 aa24.48■■□□□ 1.51
CALR-205ENST00000587486 CFAP70Q5T0N1 1121 aa24.47■■□□□ 1.51
CALR-205ENST00000587486 NHSL1Q5SYE7 1610 aa24.45■■□□□ 1.5
CALR-205ENST00000587486 TRIM26Q12899 539 aaPredicted RBP24.44■■□□□ 1.5
CALR-205ENST00000587486 DCAF11Q8TEB1 546 aa24.44■■□□□ 1.5
CALR-205ENST00000587486 STAC3Q96MF2 364 aa24.44■■□□□ 1.5
CALR-205ENST00000587486 PLEKHH1Q9ULM0 1364 aa24.43■■□□□ 1.5
CALR-205ENST00000587486 BRINP3Q76B58 766 aa24.43■■□□□ 1.5
CALR-205ENST00000587486 DLC1Q96QB1 1528 aa24.43■■□□□ 1.5
CALR-205ENST00000587486 DISP3Q9P2K9 1392 aa24.42■■□□□ 1.5
CALR-205ENST00000587486 C1orf167Q5SNV9 1468 aa24.41■■□□□ 1.5
CALR-205ENST00000587486 STK26Q9P289 416 aa24.41■■□□□ 1.5
CALR-205ENST00000587486 WAPLQ7Z5K2 1190 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms