RNA–Protein interactions for RNA: ENST00000585887.3

LSM14A-204, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 445 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-204ENST00000585887 SENP3Q9H4L4 574 aaPredicted RBP25.03■■□□□ 1.6
LSM14A-204ENST00000585887 TRPM2O94759 1503 aa25.02■■□□□ 1.6
LSM14A-204ENST00000585887 TRIM52Q96A61 297 aa25.01■■□□□ 1.59
LSM14A-204ENST00000585887 SLC26A8Q96RN1 970 aa25.01■■□□□ 1.59
LSM14A-204ENST00000585887 PPP1R15AO75807 674 aaPredicted RBP25■■□□□ 1.59
LSM14A-204ENST00000585887 PLEKHG1Q9ULL1 1385 aa25■■□□□ 1.59
LSM14A-204ENST00000585887 ALKQ9UM73 1620 aa25■■□□□ 1.59
LSM14A-204ENST00000585887 KIF1BO60333 1816 aa25■■□□□ 1.59
LSM14A-204ENST00000585887 BCANQ96GW7 911 aa24.99■■□□□ 1.59
LSM14A-204ENST00000585887 NWD1Q149M9 1564 aa24.98■■□□□ 1.59
LSM14A-204ENST00000585887 NUTM2DQ5VT03 806 aaPredicted RBP24.97■■□□□ 1.59
LSM14A-204ENST00000585887 CHD2O14647 1828 aaKnown RBP24.96■■□□□ 1.59
LSM14A-204ENST00000585887 SCAF1Q9H7N4 1312 aaKnown RBP24.95■■□□□ 1.58
LSM14A-204ENST00000585887 HDGFP51858 240 aaKnown RBP24.95■■□□□ 1.58
LSM14A-204ENST00000585887 TOM1O60784 492 aa24.94■■□□□ 1.58
LSM14A-204ENST00000585887 PIP4K2BP78356 416 aa24.94■■□□□ 1.58
LSM14A-204ENST00000585887 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.93■■□□□ 1.58
LSM14A-204ENST00000585887 SLC4A1APQ9BWU0 796 aaKnown RBP24.92■■□□□ 1.58
LSM14A-204ENST00000585887 DIP2AQ14689 1571 aa24.92■■□□□ 1.58
LSM14A-204ENST00000585887 NKTRP30414 1462 aaKnown RBP24.91■■□□□ 1.58
LSM14A-204ENST00000585887 KCNA6P17658 529 aa24.91■■□□□ 1.58
LSM14A-204ENST00000585887 ADAMTS13Q76LX8 1427 aa24.9■■□□□ 1.58
LSM14A-204ENST00000585887 NRXN3Q9Y4C0 1643 aa24.89■■□□□ 1.57
LSM14A-204ENST00000585887 NEXMIFQ5QGS0 1516 aa24.88■■□□□ 1.57
LSM14A-204ENST00000585887 ZNF326Q5BKZ1 582 aaKnown RBP24.87■■□□□ 1.57
LSM14A-204ENST00000585887 TMEM94Q12767 1356 aa24.87■■□□□ 1.57
LSM14A-204ENST00000585887 SETBP1Q9Y6X0 1596 aa24.84■■□□□ 1.57
LSM14A-204ENST00000585887 PROSER2Q86WR7 435 aaPredicted RBP24.84■■□□□ 1.57
LSM14A-204ENST00000585887 RBM33Q96EV2 1170 aaKnown RBP24.84■■□□□ 1.57
LSM14A-204ENST00000585887 FOXD1Q16676 465 aa24.83■■□□□ 1.57
LSM14A-204ENST00000585887 TBX22Q9Y458 520 aa24.83■■□□□ 1.57
LSM14A-204ENST00000585887 SETD5Q9C0A6 1442 aa24.82■■□□□ 1.56
LSM14A-204ENST00000585887 HSPA1LP34931 641 aa24.81■■□□□ 1.56
LSM14A-204ENST00000585887 PPLO60437 1756 aa24.8■■□□□ 1.56
LSM14A-204ENST00000585887 MPHOSPH9Q99550 1183 aa24.78■■□□□ 1.56
LSM14A-204ENST00000585887 PIK3R4Q99570 1358 aa24.78■■□□□ 1.56
LSM14A-204ENST00000585887 XRN1Q8IZH2 1706 aaKnown RBP24.78■■□□□ 1.56
LSM14A-204ENST00000585887 PTPRUQ92729 1446 aa24.76■■□□□ 1.55
LSM14A-204ENST00000585887 RAB3GAP2Q9H2M9 1393 aa24.75■■□□□ 1.55
LSM14A-204ENST00000585887 SETD1AO15047 1707 aaKnown RBP24.74■■□□□ 1.55
LSM14A-204ENST00000585887 CCDC144AA2RUR9 1427 aa24.73■■□□□ 1.55
LSM14A-204ENST00000585887 MSH6P52701 1360 aa24.73■■□□□ 1.55
LSM14A-204ENST00000585887 DISP3Q9P2K9 1392 aa24.73■■□□□ 1.55
LSM14A-204ENST00000585887 ROBO1Q9Y6N7 1651 aa24.72■■□□□ 1.55
LSM14A-204ENST00000585887 IFT172Q9UG01 1749 aa24.71■■□□□ 1.55
LSM14A-204ENST00000585887 METP08581 1390 aa24.7■■□□□ 1.55
LSM14A-204ENST00000585887 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.7■■□□□ 1.54
LSM14A-204ENST00000585887 AMOTL2Q9Y2J4 779 aa24.69■■□□□ 1.54
LSM14A-204ENST00000585887 ACIN1Q9UKV3 1341 aaKnown RBP24.68■■□□□ 1.54
LSM14A-204ENST00000585887 C14orf37Q86TY3 774 aa24.66■■□□□ 1.54
LSM14A-204ENST00000585887 FAM135BQ49AJ0 1406 aa24.66■■□□□ 1.54
LSM14A-204ENST00000585887 SPATA31E1Q6ZUB1 1445 aa24.66■■□□□ 1.54
LSM14A-204ENST00000585887 NCOA3Q9Y6Q9 1424 aa24.66■■□□□ 1.54
LSM14A-204ENST00000585887 MED1Q15648 1581 aaPredicted RBP24.66■■□□□ 1.54
LSM14A-204ENST00000585887 RPGRIP1LQ68CZ1 1315 aa24.65■■□□□ 1.54
LSM14A-204ENST00000585887 VGFO15240 615 aaPredicted RBP24.64■■□□□ 1.54
LSM14A-204ENST00000585887 RGL3Q3MIN7 710 aa24.61■■□□□ 1.53
LSM14A-204ENST00000585887 NALCNQ8IZF0 1738 aa24.61■■□□□ 1.53
LSM14A-204ENST00000585887 PHLPP1O60346 1717 aa24.6■■□□□ 1.53
LSM14A-204ENST00000585887 SLAIN2Q9P270 581 aa24.58■■□□□ 1.53
LSM14A-204ENST00000585887 C19orf44Q9H6X5 657 aa24.56■■□□□ 1.52
LSM14A-204ENST00000585887 ADGRF5Q8IZF2 1346 aa24.56■■□□□ 1.52
LSM14A-204ENST00000585887 ANKRD30BQ9BXX2 1392 aa24.54■■□□□ 1.52
LSM14A-204ENST00000585887 ATF3P18847 181 aa24.54■■□□□ 1.52
LSM14A-204ENST00000585887 CADPS2Q86UW7 1296 aa24.54■■□□□ 1.52
LSM14A-204ENST00000585887 DCCP43146 1447 aa24.53■■□□□ 1.52
LSM14A-204ENST00000585887 PTCH1Q13635 1447 aa24.53■■□□□ 1.52
LSM14A-204ENST00000585887 ADGRL3Q9HAR2 1447 aa24.52■■□□□ 1.52
LSM14A-204ENST00000585887 ILDR2Q71H61 639 aa24.51■■□□□ 1.51
LSM14A-204ENST00000585887 ROBO2Q9HCK4 1378 aa24.5■■□□□ 1.51
LSM14A-204ENST00000585887 PIK3C2GO75747 1445 aa24.5■■□□□ 1.51
LSM14A-204ENST00000585887 PRAG1Q86YV5 1406 aa24.5■■□□□ 1.51
LSM14A-204ENST00000585887 ASXL1Q8IXJ9 1541 aa24.5■■□□□ 1.51
LSM14A-204ENST00000585887 COL16A1Q07092 1604 aaPredicted RBP24.5■■□□□ 1.51
LSM14A-204ENST00000585887 HRCP23327 699 aa24.48■■□□□ 1.51
LSM14A-204ENST00000585887 KNDC1Q76NI1 1749 aa24.47■■□□□ 1.51
LSM14A-204ENST00000585887 AHDC1Q5TGY3 1603 aaPredicted RBP24.47■■□□□ 1.51
LSM14A-204ENST00000585887 MYOM2P54296 1465 aa24.47■■□□□ 1.51
LSM14A-204ENST00000585887 MST1RQ04912 1400 aa24.47■■□□□ 1.51
LSM14A-204ENST00000585887 LAMC1P11047 1609 aa24.46■■□□□ 1.51
LSM14A-204ENST00000585887 NRXN1Q9ULB1 1477 aa24.44■■□□□ 1.5
LSM14A-204ENST00000585887 NHSL1Q5SYE7 1610 aa24.43■■□□□ 1.5
LSM14A-204ENST00000585887 BRINP3Q76B58 766 aa24.41■■□□□ 1.5
LSM14A-204ENST00000585887 PHF23Q9BUL5 403 aaPredicted RBP24.41■■□□□ 1.5
LSM14A-204ENST00000585887 STK26Q9P289 416 aa24.4■■□□□ 1.5
LSM14A-204ENST00000585887 LRPPRCP42704 1394 aaKnown RBP24.4■■□□□ 1.5
LSM14A-204ENST00000585887 TECPR2O15040 1411 aa24.39■■□□□ 1.5
LSM14A-204ENST00000585887 TMEM132EQ6IEE7 984 aa24.39■■□□□ 1.49
LSM14A-204ENST00000585887 CDC42BPGQ6DT37 1551 aa24.37■■□□□ 1.49
LSM14A-204ENST00000585887 SHPRHQ149N8 1683 aa24.37■■□□□ 1.49
LSM14A-204ENST00000585887 JCADQ9P266 1359 aa24.37■■□□□ 1.49
LSM14A-204ENST00000585887 YTHDC2Q9H6S0 1430 aaKnown RBP24.36■■□□□ 1.49
LSM14A-204ENST00000585887 C1orf167Q5SNV9 1468 aa24.35■■□□□ 1.49
LSM14A-204ENST00000585887 C14orf93Q9H972 538 aaKnown RBP24.34■■□□□ 1.49
LSM14A-204ENST00000585887 ABCC11Q96J66 1382 aa24.33■■□□□ 1.49
LSM14A-204ENST00000585887 CFAP70Q5T0N1 1121 aa24.33■■□□□ 1.49
LSM14A-204ENST00000585887 PLEKHH1Q9ULM0 1364 aa24.32■■□□□ 1.48
LSM14A-204ENST00000585887 WAPLQ7Z5K2 1190 aa24.31■■□□□ 1.48
LSM14A-204ENST00000585887 DDX17Q92841 729 aaKnown RBP24.29■■□□□ 1.48
LSM14A-204ENST00000585887 KDM2AQ9Y2K7 1162 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms