RNA–Protein interactions for RNA: ENST00000585760.5

GCDH-204, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-204ENST00000585760 XIRP1Q702N8 1843 aaKnown RBP21.83■■□□□ 1.09
GCDH-204ENST00000585760 GCC2Q8IWJ2 1684 aa21.83■■□□□ 1.09
GCDH-204ENST00000585760 TMEM94Q12767 1356 aa21.83■■□□□ 1.08
GCDH-204ENST00000585760 POTEAQ6S8J7 498 aa21.82■■□□□ 1.08
GCDH-204ENST00000585760 KCNA6P17658 529 aa21.81■■□□□ 1.08
GCDH-204ENST00000585760 KDM5AP29375 1690 aaKnown RBP21.81■■□□□ 1.08
GCDH-204ENST00000585760 HFM1A2PYH4 1435 aa21.8■■□□□ 1.08
GCDH-204ENST00000585760 E9PCH4 1651 aa21.79■■□□□ 1.08
GCDH-204ENST00000585760 PROSER2Q86WR7 435 aaPredicted RBP21.78■■□□□ 1.08
GCDH-204ENST00000585760 ADGRB3O60242 1522 aa21.76■■□□□ 1.07
GCDH-204ENST00000585760 SLC26A8Q96RN1 970 aa21.76■■□□□ 1.07
GCDH-204ENST00000585760 TRIM52Q96A61 297 aa21.75■■□□□ 1.07
GCDH-204ENST00000585760 RBM33Q96EV2 1170 aaKnown RBP21.74■■□□□ 1.07
GCDH-204ENST00000585760 ROBO1Q9Y6N7 1651 aa21.73■■□□□ 1.07
GCDH-204ENST00000585760 HDGFP51858 240 aaKnown RBP21.73■■□□□ 1.07
GCDH-204ENST00000585760 CHGAP10645 457 aaKnown RBP21.72■■□□□ 1.07
GCDH-204ENST00000585760 MSH6P52701 1360 aa21.7■■□□□ 1.06
GCDH-204ENST00000585760 NKTRP30414 1462 aaKnown RBP21.7■■□□□ 1.06
GCDH-204ENST00000585760 BCANQ96GW7 911 aa21.69■■□□□ 1.06
GCDH-204ENST00000585760 TMEM131LA2VDJ0 1609 aa21.69■■□□□ 1.06
GCDH-204ENST00000585760 SLAIN2Q9P270 581 aa21.68■■□□□ 1.06
GCDH-204ENST00000585760 ZFYVE9O95405 1425 aa21.67■■□□□ 1.06
GCDH-204ENST00000585760 RIMS2Q9UQ26 1411 aa21.67■■□□□ 1.06
GCDH-204ENST00000585760 JCADQ9P266 1359 aa21.67■■□□□ 1.06
GCDH-204ENST00000585760 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.67■■□□□ 1.06
GCDH-204ENST00000585760 SLC4A1APQ9BWU0 796 aaKnown RBP21.66■■□□□ 1.06
GCDH-204ENST00000585760 NWD1Q149M9 1564 aa21.65■■□□□ 1.06
GCDH-204ENST00000585760 PPP1R15AO75807 674 aaPredicted RBP21.65■■□□□ 1.06
GCDH-204ENST00000585760 SPHKAPQ2M3C7 1700 aa21.63■■□□□ 1.05
GCDH-204ENST00000585760 MYO5BQ9ULV0 1848 aa21.62■■□□□ 1.05
GCDH-204ENST00000585760 PLEKHG1Q9ULL1 1385 aa21.61■■□□□ 1.05
GCDH-204ENST00000585760 ACIN1Q9UKV3 1341 aaKnown RBP21.61■■□□□ 1.05
GCDH-204ENST00000585760 PHLPP1O60346 1717 aa21.6■■□□□ 1.05
GCDH-204ENST00000585760 NUTM2DQ5VT03 806 aaPredicted RBP21.6■■□□□ 1.05
GCDH-204ENST00000585760 SETD5Q9C0A6 1442 aa21.58■■□□□ 1.05
GCDH-204ENST00000585760 TRPM2O94759 1503 aa21.58■■□□□ 1.04
GCDH-204ENST00000585760 SETD1AO15047 1707 aaKnown RBP21.58■■□□□ 1.04
GCDH-204ENST00000585760 ZNF326Q5BKZ1 582 aaKnown RBP21.57■■□□□ 1.04
GCDH-204ENST00000585760 TBX22Q9Y458 520 aa21.57■■□□□ 1.04
GCDH-204ENST00000585760 SPATA31A6Q5VVP1 1343 aa21.56■■□□□ 1.04
GCDH-204ENST00000585760 MPHOSPH9Q99550 1183 aa21.56■■□□□ 1.04
GCDH-204ENST00000585760 NCOA3Q9Y6Q9 1424 aa21.55■■□□□ 1.04
GCDH-204ENST00000585760 MEX3CQ5U5Q3 659 aaKnown RBP21.55■■□□□ 1.04
GCDH-204ENST00000585760 ZNF772Q68DY9 489 aaPredicted RBP21.55■■□□□ 1.04
GCDH-204ENST00000585760 C14orf37Q86TY3 774 aa21.54■■□□□ 1.04
GCDH-204ENST00000585760 CLTCL1P53675 1640 aa21.54■■□□□ 1.04
GCDH-204ENST00000585760 FOXD1Q16676 465 aa21.53■■□□□ 1.04
GCDH-204ENST00000585760 COL16A1Q07092 1604 aaPredicted RBP21.53■■□□□ 1.04
GCDH-204ENST00000585760 CHD2O14647 1828 aaKnown RBP21.51■■□□□ 1.03
GCDH-204ENST00000585760 CADPS2Q86UW7 1296 aa21.51■■□□□ 1.03
GCDH-204ENST00000585760 UPF1Q92900 1129 aaKnown RBP eCLIP21.51■■□□□ 1.03
GCDH-204ENST00000585760 LRP6O75581 1613 aa21.51■■□□□ 1.03
GCDH-204ENST00000585760 ADAMTS13Q76LX8 1427 aa21.5■■□□□ 1.03
GCDH-204ENST00000585760 ATF3P18847 181 aa21.49■■□□□ 1.03
GCDH-204ENST00000585760 C19orf44Q9H6X5 657 aa21.49■■□□□ 1.03
GCDH-204ENST00000585760 RAB3GAP2Q9H2M9 1393 aa21.48■■□□□ 1.03
GCDH-204ENST00000585760 PIK3R4Q99570 1358 aa21.47■■□□□ 1.03
GCDH-204ENST00000585760 KIF1BO60333 1816 aa21.46■■□□□ 1.03
GCDH-204ENST00000585760 RPGRIP1LQ68CZ1 1315 aa21.46■■□□□ 1.03
GCDH-204ENST00000585760 DIP2AQ14689 1571 aa21.45■■□□□ 1.02
GCDH-204ENST00000585760 RXRBP28702 533 aa21.45■■□□□ 1.02
GCDH-204ENST00000585760 AHDC1Q5TGY3 1603 aaPredicted RBP21.44■■□□□ 1.02
GCDH-204ENST00000585760 VGFO15240 615 aaPredicted RBP21.44■■□□□ 1.02
GCDH-204ENST00000585760 NEXMIFQ5QGS0 1516 aa21.44■■□□□ 1.02
GCDH-204ENST00000585760 HRCP23327 699 aa21.43■■□□□ 1.02
GCDH-204ENST00000585760 CCDC144AA2RUR9 1427 aa21.43■■□□□ 1.02
GCDH-204ENST00000585760 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.41■■□□□ 1.02
GCDH-204ENST00000585760 SHPRHQ149N8 1683 aa21.41■■□□□ 1.02
GCDH-204ENST00000585760 SETBP1Q9Y6X0 1596 aa21.41■■□□□ 1.02
GCDH-204ENST00000585760 BRINP3Q76B58 766 aa21.4■■□□□ 1.02
GCDH-204ENST00000585760 AMOTL2Q9Y2J4 779 aa21.4■■□□□ 1.02
GCDH-204ENST00000585760 NUTM2BA6NNL0 878 aaPredicted RBP21.39■■□□□ 1.01
GCDH-204ENST00000585760 NUTM2EB1AL46 878 aaPredicted RBP21.39■■□□□ 1.01
GCDH-204ENST00000585760 NUTM2AQ8IVF1 878 aaPredicted RBP21.39■■□□□ 1.01
GCDH-204ENST00000585760 NRXN3Q9Y4C0 1643 aa21.38■■□□□ 1.01
GCDH-204ENST00000585760 PTPRUQ92729 1446 aa21.38■■□□□ 1.01
GCDH-204ENST00000585760 RGL3Q3MIN7 710 aa21.37■■□□□ 1.01
GCDH-204ENST00000585760 CDK12Q9NYV4 1490 aaPredicted RBP21.37■■□□□ 1.01
GCDH-204ENST00000585760 METP08581 1390 aa21.36■■□□□ 1.01
GCDH-204ENST00000585760 SPATA31E1Q6ZUB1 1445 aa21.35■■□□□ 1.01
GCDH-204ENST00000585760 AFF2P51816 1311 aa21.34■■□□□ 1.01
GCDH-204ENST00000585760 DCCP43146 1447 aa21.34■■□□□ 1.01
GCDH-204ENST00000585760 LRRC59Q96AG4 307 aaKnown RBP21.31■■□□□ 1
GCDH-204ENST00000585760 ANKRD30BQ9BXX2 1392 aa21.31■■□□□ 1
GCDH-204ENST00000585760 ASXL1Q8IXJ9 1541 aa21.3■■□□□ 1
GCDH-204ENST00000585760 PPLO60437 1756 aa21.3■■□□□ 1
GCDH-204ENST00000585760 ADGRF5Q8IZF2 1346 aa21.29■■□□□ 1
GCDH-204ENST00000585760 C8orf37Q96NL8 207 aa21.28■■□□□ 1
GCDH-204ENST00000585760 MST1RQ04912 1400 aa21.28■■□□□ 1
GCDH-204ENST00000585760 XRN1Q8IZH2 1706 aaKnown RBP21.27■■□□□ 1
GCDH-204ENST00000585760 RBM6P78332 1123 aaKnown RBP21.27■■□□□ 1
GCDH-204ENST00000585760 QTRT2Q9H974 415 aaKnown RBP21.27■■□□□ 1
GCDH-204ENST00000585760 RGS12O14924 1447 aa21.24■□□□□ 0.99
GCDH-204ENST00000585760 PNPLA6Q8IY17 1366 aa21.23■□□□□ 0.99
GCDH-204ENST00000585760 NHSL1Q5SYE7 1610 aa21.22■□□□□ 0.99
GCDH-204ENST00000585760 DDX17Q92841 729 aaKnown RBP21.21■□□□□ 0.99
GCDH-204ENST00000585760 IFT172Q9UG01 1749 aa21.21■□□□□ 0.99
GCDH-204ENST00000585760 NGLY1Q96IV0 654 aa21.2■□□□□ 0.98
GCDH-204ENST00000585760 ADGRL3Q9HAR2 1447 aa21.2■□□□□ 0.98
GCDH-204ENST00000585760 PIK3C2GO75747 1445 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms