RNA–Protein interactions for RNA: ENST00000585652.5

AP3D1-203, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 2

Gene AP3D1, Length 4,433 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-203ENST00000585652 CENPQQ7L2Z9 268 aaPredicted RBP16.54■□□□□ 0.24
AP3D1-203ENST00000585652 COG3Q96JB2 828 aa16.53■□□□□ 0.24
AP3D1-203ENST00000585652 MFAP1P55081 439 aaKnown RBP16.53■□□□□ 0.24
AP3D1-203ENST00000585652 HSCBQ8IWL3 235 aa16.53■□□□□ 0.24
AP3D1-203ENST00000585652 PLEKHH2Q8IVE3 1493 aa16.53■□□□□ 0.24
AP3D1-203ENST00000585652 SLC4A10Q6U841 1118 aa16.52■□□□□ 0.24
AP3D1-203ENST00000585652 CCDC141Q6ZP82 1450 aa16.52■□□□□ 0.24
AP3D1-203ENST00000585652 DIAPH1O60610 1272 aaKnown RBP16.52■□□□□ 0.23
AP3D1-203ENST00000585652 RIPK4P57078 832 aa16.51■□□□□ 0.23
AP3D1-203ENST00000585652 RUNDC1Q96C34 613 aa16.51■□□□□ 0.23
AP3D1-203ENST00000585652 ZKSCAN2Q63HK3 967 aa16.5■□□□□ 0.23
AP3D1-203ENST00000585652 RPRD2Q5VT52 1461 aaKnown RBP16.49■□□□□ 0.23
AP3D1-203ENST00000585652 HMOX1P09601 288 aa16.49■□□□□ 0.23
AP3D1-203ENST00000585652 GPATCH8Q9UKJ3 1502 aaKnown RBP16.49■□□□□ 0.23
AP3D1-203ENST00000585652 TCP11L2Q8N4U5 519 aa16.49■□□□□ 0.23
AP3D1-203ENST00000585652 PANK1Q8TE04 598 aa16.48■□□□□ 0.23
AP3D1-203ENST00000585652 STK31Q9BXU1 1019 aa16.48■□□□□ 0.23
AP3D1-203ENST00000585652 ERBINQ96RT1 1412 aa16.47■□□□□ 0.23
AP3D1-203ENST00000585652 LMOD3Q0VAK6 560 aa16.47■□□□□ 0.23
AP3D1-203ENST00000585652 PRAM1Q96QH2 718 aa16.47■□□□□ 0.23
AP3D1-203ENST00000585652 NUP153P49790 1475 aaKnown RBP16.46■□□□□ 0.23
AP3D1-203ENST00000585652 FAM161AQ3B820 660 aa16.46■□□□□ 0.23
AP3D1-203ENST00000585652 UGGT2Q9NYU1 1516 aa16.45■□□□□ 0.22
AP3D1-203ENST00000585652 TRIM44Q96DX7 344 aaPredicted RBP16.45■□□□□ 0.22
AP3D1-203ENST00000585652 CSB-PGBD3P0DP91 1061 aa16.45■□□□□ 0.22
AP3D1-203ENST00000585652 KCNJ4P48050 445 aa16.45■□□□□ 0.22
AP3D1-203ENST00000585652 FANCIQ9NVI1 1328 aa16.43■□□□□ 0.22
AP3D1-203ENST00000585652 NGEFQ8N5V2 710 aa16.43■□□□□ 0.22
AP3D1-203ENST00000585652 KIF14Q15058 1648 aa16.43■□□□□ 0.22
AP3D1-203ENST00000585652 ATP10BO94823 1461 aa16.42■□□□□ 0.22
AP3D1-203ENST00000585652 DZIP1LQ8IYY4 767 aaKnown RBP16.42■□□□□ 0.22
AP3D1-203ENST00000585652 GZF1Q9H116 711 aaPredicted RBP16.41■□□□□ 0.22
AP3D1-203ENST00000585652 BCAR3O75815 825 aa16.41■□□□□ 0.22
AP3D1-203ENST00000585652 ANKRD45Q5TZF3 282 aa16.41■□□□□ 0.22
AP3D1-203ENST00000585652 TAOK2Q9UL54 1235 aa16.41■□□□□ 0.22
AP3D1-203ENST00000585652 TXNDC2Q86VQ3 553 aa16.39■□□□□ 0.22
AP3D1-203ENST00000585652 CABP1Q9NZU7 370 aa16.39■□□□□ 0.21
AP3D1-203ENST00000585652 ADGRF5Q8IZF2 1346 aa16.38■□□□□ 0.21
AP3D1-203ENST00000585652 ZNF330Q9Y3S2 320 aaPredicted RBP16.38■□□□□ 0.21
AP3D1-203ENST00000585652 FOXD4L1Q9NU39 408 aa16.38■□□□□ 0.21
AP3D1-203ENST00000585652 NECTIN2Q92692 538 aa16.37■□□□□ 0.21
AP3D1-203ENST00000585652 SLC52A1Q9NWF4 448 aa16.37■□□□□ 0.21
AP3D1-203ENST00000585652 NUTM2GQ5VZR2 741 aa16.37■□□□□ 0.21
AP3D1-203ENST00000585652 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.37■□□□□ 0.21
AP3D1-203ENST00000585652 CTTNBP2Q8WZ74 1663 aa16.37■□□□□ 0.21
AP3D1-203ENST00000585652 FGD1P98174 961 aa16.37■□□□□ 0.21
AP3D1-203ENST00000585652 RAPGEF6Q8TEU7 1601 aa16.36■□□□□ 0.21
AP3D1-203ENST00000585652 SMG6Q86US8 1419 aaKnown RBP16.36■□□□□ 0.21
AP3D1-203ENST00000585652 TSR2Q969E8 191 aaKnown RBP16.36■□□□□ 0.21
AP3D1-203ENST00000585652 DDX19BQ9UMR2 479 aa16.36■□□□□ 0.21
AP3D1-203ENST00000585652 HMMRO75330 724 aa16.35■□□□□ 0.21
AP3D1-203ENST00000585652 TRIM6-TRIM34B2RNG4 842 aa16.35■□□□□ 0.21
AP3D1-203ENST00000585652 CDK19Q9BWU1 502 aa16.35■□□□□ 0.21
AP3D1-203ENST00000585652 PRKAR2BP31323 418 aa16.35■□□□□ 0.21
AP3D1-203ENST00000585652 MCCP23508 829 aa16.34■□□□□ 0.21
AP3D1-203ENST00000585652 EXOSC9Q06265 439 aaKnown RBP16.34■□□□□ 0.21
AP3D1-203ENST00000585652 NAP1L2Q9ULW6 460 aaPredicted RBP16.33■□□□□ 0.21
AP3D1-203ENST00000585652 CD109Q6YHK3 1445 aa16.33■□□□□ 0.2
AP3D1-203ENST00000585652 ADGRL1O94910 1474 aa16.33■□□□□ 0.2
AP3D1-203ENST00000585652 PLCB2Q00722 1185 aa16.32■□□□□ 0.2
AP3D1-203ENST00000585652 LNPKQ9C0E8 428 aa16.32■□□□□ 0.2
AP3D1-203ENST00000585652 ANO8Q9HCE9 1232 aaPredicted RBP16.31■□□□□ 0.2
AP3D1-203ENST00000585652 PTMAP06454 111 aaKnown RBP16.31■□□□□ 0.2
AP3D1-203ENST00000585652 ADAMTS12P58397 1594 aa16.31■□□□□ 0.2
AP3D1-203ENST00000585652 EIF2S2P20042 333 aaKnown RBP16.31■□□□□ 0.2
AP3D1-203ENST00000585652 KIAA1211Q6ZU35 1233 aa16.31■□□□□ 0.2
AP3D1-203ENST00000585652 DISP3Q9P2K9 1392 aa16.3■□□□□ 0.2
AP3D1-203ENST00000585652 NOL8Q76FK4 1167 aaKnown RBP16.3■□□□□ 0.2
AP3D1-203ENST00000585652 CFAP44Q96MT7 982 aa16.3■□□□□ 0.2
AP3D1-203ENST00000585652 KIF21AQ7Z4S6 1674 aa16.3■□□□□ 0.2
AP3D1-203ENST00000585652 CFAP43Q8NDM7 1665 aa16.3■□□□□ 0.2
AP3D1-203ENST00000585652 GNAI1P63096 354 aa16.3■□□□□ 0.2
AP3D1-203ENST00000585652 SLC26A8Q96RN1 970 aa16.3■□□□□ 0.2
AP3D1-203ENST00000585652 IDI1Q13907 227 aa16.29■□□□□ 0.2
AP3D1-203ENST00000585652 WDR62O43379 1518 aa16.29■□□□□ 0.2
AP3D1-203ENST00000585652 NLRP6P59044 892 aa16.29■□□□□ 0.2
AP3D1-203ENST00000585652 FBXO31Q5XUX0 539 aaPredicted RBP16.29■□□□□ 0.2
AP3D1-203ENST00000585652 SKAP1Q86WV1 359 aa16.29■□□□□ 0.2
AP3D1-203ENST00000585652 NSD3Q9BZ95 1437 aa16.28■□□□□ 0.2
AP3D1-203ENST00000585652 TEFQ10587 303 aa16.28■□□□□ 0.2
AP3D1-203ENST00000585652 TCOF1Q13428 1488 aaKnown RBP16.28■□□□□ 0.2
AP3D1-203ENST00000585652 KIF16BQ96L93 1317 aa16.28■□□□□ 0.2
AP3D1-203ENST00000585652 KIAA0556O60303 1618 aa16.28■□□□□ 0.2
AP3D1-203ENST00000585652 PSME1Q06323 249 aa16.28■□□□□ 0.2
AP3D1-203ENST00000585652 WAPLQ7Z5K2 1190 aa16.28■□□□□ 0.2
AP3D1-203ENST00000585652 RPGRIP1LQ68CZ1 1315 aa16.28■□□□□ 0.2
AP3D1-203ENST00000585652 C20orf194Q5TEA3 1177 aa16.27■□□□□ 0.2
AP3D1-203ENST00000585652 FANCAO15360 1455 aa16.27■□□□□ 0.19
AP3D1-203ENST00000585652 API5Q9BZZ5 524 aaKnown RBP16.27■□□□□ 0.19
AP3D1-203ENST00000585652 CHMP3Q9Y3E7 222 aa16.26■□□□□ 0.19
AP3D1-203ENST00000585652 WWC1Q8IX03 1113 aa16.26■□□□□ 0.19
AP3D1-203ENST00000585652 GBP4Q96PP9 640 aa16.26■□□□□ 0.19
AP3D1-203ENST00000585652 FKBP5Q13451 457 aaPredicted RBP16.25■□□□□ 0.19
AP3D1-203ENST00000585652 TSPYL4Q9UJ04 414 aa16.25■□□□□ 0.19
AP3D1-203ENST00000585652 DISP1Q96F81 1524 aa16.25■□□□□ 0.19
AP3D1-203ENST00000585652 SLFN5Q08AF3 891 aa16.25■□□□□ 0.19
AP3D1-203ENST00000585652 CHMP4AQ9BY43 222 aa16.25■□□□□ 0.19
AP3D1-203ENST00000585652 RILPL2Q969X0 211 aa16.25■□□□□ 0.19
AP3D1-203ENST00000585652 PDE3AQ14432 1141 aa16.24■□□□□ 0.19
AP3D1-203ENST00000585652 RRS1Q15050 365 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms