RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 WNT2BQ93097 391 aa10.18□□□□□ -0.78
SMAD4-203ENST00000585448 GPCPD1Q9NPB8 672 aa10.18□□□□□ -0.78
SMAD4-203ENST00000585448 PRKCSHP14314 528 aaPredicted RBP10.17□□□□□ -0.78
SMAD4-203ENST00000585448 SWT1Q5T5J6 900 aaKnown RBP10.17□□□□□ -0.78
SMAD4-203ENST00000585448 SAMD7Q7Z3H4 446 aa10.17□□□□□ -0.78
SMAD4-203ENST00000585448 SLF2Q8IX21 1173 aa10.17□□□□□ -0.78
SMAD4-203ENST00000585448 LRCH3Q96II8 777 aa10.17□□□□□ -0.78
SMAD4-203ENST00000585448 SLC4A3P48751 1232 aa10.16□□□□□ -0.78
SMAD4-203ENST00000585448 PDE4DQ08499 809 aa10.16□□□□□ -0.78
SMAD4-203ENST00000585448 THSD4Q6ZMP0 1018 aa10.16□□□□□ -0.78
SMAD4-203ENST00000585448 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.16□□□□□ -0.78
SMAD4-203ENST00000585448 MMRN1Q13201 1228 aa10.14□□□□□ -0.79
SMAD4-203ENST00000585448 NYAP1Q6ZVC0 841 aa10.14□□□□□ -0.79
SMAD4-203ENST00000585448 SULF1Q8IWU6 871 aa10.14□□□□□ -0.79
SMAD4-203ENST00000585448 RNF166Q96A37 237 aaPredicted RBP10.14□□□□□ -0.79
SMAD4-203ENST00000585448 PARP9Q8IXQ6 854 aa10.13□□□□□ -0.79
SMAD4-203ENST00000585448 MDM2Q00987 491 aaPredicted RBP10.12□□□□□ -0.79
SMAD4-203ENST00000585448 FAM217BQ9NTX9 383 aaPredicted RBP10.12□□□□□ -0.79
SMAD4-203ENST00000585448 TSR3Q9UJK0 312 aaKnown RBP10.12□□□□□ -0.79
SMAD4-203ENST00000585448 KCTD12Q96CX2 325 aaKnown RBP10.11□□□□□ -0.79
SMAD4-203ENST00000585448 TTLL12Q14166 644 aaPredicted RBP10.1□□□□□ -0.79
SMAD4-203ENST00000585448 RSPH4AQ5TD94 716 aa10.1□□□□□ -0.79
SMAD4-203ENST00000585448 GIGYF2Q6Y7W6 1299 aaKnown RBP10.1□□□□□ -0.79
SMAD4-203ENST00000585448 REPIN1Q9BWE0 567 aaKnown RBP10.1□□□□□ -0.79
SMAD4-203ENST00000585448 CD46P15529 392 aa10.08□□□□□ -0.8
SMAD4-203ENST00000585448 BCAMP50895 628 aa10.08□□□□□ -0.8
SMAD4-203ENST00000585448 NLRP7Q8WX94 980 aa10.08□□□□□ -0.8
SMAD4-203ENST00000585448 PRR14Q9BWN1 585 aa10.08□□□□□ -0.8
SMAD4-203ENST00000585448 HPS5Q9UPZ3 1129 aa10.08□□□□□ -0.8
SMAD4-203ENST00000585448 SLC10A3P09131 477 aa10.07□□□□□ -0.8
SMAD4-203ENST00000585448 HCSTQ9UBK5 93 aa10.07□□□□□ -0.8
SMAD4-203ENST00000585448 PPP4CP60510 307 aa10.06□□□□□ -0.8
SMAD4-203ENST00000585448 SSTR3P32745 418 aaPredicted RBP10.05□□□□□ -0.8
SMAD4-203ENST00000585448 BRPF1P55201 1214 aaPredicted RBP10.05□□□□□ -0.8
SMAD4-203ENST00000585448 DDX11L8A8MPP1 907 aa10.04□□□□□ -0.8
SMAD4-203ENST00000585448 WBP1LQ9NX94 342 aa10.04□□□□□ -0.8
SMAD4-203ENST00000585448 GCGRP47871 477 aa10.03□□□□□ -0.8
SMAD4-203ENST00000585448 KDM4CQ9H3R0 1056 aa10.03□□□□□ -0.8
SMAD4-203ENST00000585448 MS4A1P11836 297 aa10.02□□□□□ -0.81
SMAD4-203ENST00000585448 KMT5BQ4FZB7 885 aa10.02□□□□□ -0.81
SMAD4-203ENST00000585448 ACTN4O43707 911 aaKnown RBP10.01□□□□□ -0.81
SMAD4-203ENST00000585448 RNF40O75150 1001 aa10.01□□□□□ -0.81
SMAD4-203ENST00000585448 RDH13Q8NBN7 331 aa10.01□□□□□ -0.81
SMAD4-203ENST00000585448 CFHP08603 1231 aa10□□□□□ -0.81
SMAD4-203ENST00000585448 DIXDC1Q155Q3 683 aa10□□□□□ -0.81
SMAD4-203ENST00000585448 NEUROD2Q15784 382 aa10□□□□□ -0.81
SMAD4-203ENST00000585448 APLP1P51693 650 aa9.99□□□□□ -0.81
SMAD4-203ENST00000585448 USP46P62068 366 aa9.99□□□□□ -0.81
SMAD4-203ENST00000585448 DDRGK1Q96HY6 314 aa9.99□□□□□ -0.81
SMAD4-203ENST00000585448 GPBP1L1Q9HC44 474 aaPredicted RBP9.99□□□□□ -0.81
SMAD4-203ENST00000585448 PTPN5P54829 565 aa9.98□□□□□ -0.81
SMAD4-203ENST00000585448 BEGAINQ9BUH8 593 aa9.97□□□□□ -0.81
SMAD4-203ENST00000585448 KDM4AO75164 1064 aa9.96□□□□□ -0.82
SMAD4-203ENST00000585448 GJA5P36382 358 aa9.95□□□□□ -0.82
SMAD4-203ENST00000585448 GRIPAP1Q4V328 841 aa9.95□□□□□ -0.82
SMAD4-203ENST00000585448 ITGBL1O95965 494 aaPredicted RBP9.94□□□□□ -0.82
SMAD4-203ENST00000585448 HRCP23327 699 aa9.94□□□□□ -0.82
SMAD4-203ENST00000585448 ATP6V1AP38606 617 aa9.93□□□□□ -0.82
SMAD4-203ENST00000585448 SPIRE2Q8WWL2 714 aa9.93□□□□□ -0.82
SMAD4-203ENST00000585448 HOXA2O43364 376 aa9.92□□□□□ -0.82
SMAD4-203ENST00000585448 FUT2Q10981 343 aa9.92□□□□□ -0.82
SMAD4-203ENST00000585448 IFFO2Q5TF58 517 aa9.92□□□□□ -0.82
SMAD4-203ENST00000585448 NUTM1Q86Y26 1132 aa9.92□□□□□ -0.82
SMAD4-203ENST00000585448 FAM117AQ9C073 453 aa9.92□□□□□ -0.82
SMAD4-203ENST00000585448 GOPCQ9HD26 462 aa9.92□□□□□ -0.82
SMAD4-203ENST00000585448 PLEKHG3A1L390 1219 aa9.91□□□□□ -0.82
SMAD4-203ENST00000585448 ERICH6Q7L0X2 663 aa9.91□□□□□ -0.82
SMAD4-203ENST00000585448 RSPH6AQ9H0K4 717 aa9.91□□□□□ -0.82
SMAD4-203ENST00000585448 PCDHB3Q9Y5E6 796 aa9.91□□□□□ -0.82
SMAD4-203ENST00000585448 TUSC1Q2TAM9 212 aa9.9□□□□□ -0.82
SMAD4-203ENST00000585448 TJAP1Q5JTD0 557 aa9.9□□□□□ -0.82
SMAD4-203ENST00000585448 MORN1Q5T089 497 aa9.9□□□□□ -0.82
SMAD4-203ENST00000585448 SALL2Q9Y467 1007 aaPredicted RBP9.9□□□□□ -0.82
SMAD4-203ENST00000585448 TBC1D2Q9BYX2 928 aa9.89□□□□□ -0.83
SMAD4-203ENST00000585448 IL21Q9HBE4 155 aa9.89□□□□□ -0.83
SMAD4-203ENST00000585448 SH3D19Q5HYK7 790 aa9.88□□□□□ -0.83
SMAD4-203ENST00000585448 NR1I2O75469 434 aa9.87□□□□□ -0.83
SMAD4-203ENST00000585448 MYSM1Q5VVJ2 828 aa9.87□□□□□ -0.83
SMAD4-203ENST00000585448 MTRQ99707 1265 aa9.87□□□□□ -0.83
SMAD4-203ENST00000585448 SPTLC1O15269 473 aa9.86□□□□□ -0.83
SMAD4-203ENST00000585448 BLOC1S3Q6QNY0 202 aa9.86□□□□□ -0.83
SMAD4-203ENST00000585448 RSBN1LQ6PCB5 846 aaPredicted RBP9.85□□□□□ -0.83
SMAD4-203ENST00000585448 ZPR1O75312 459 aa9.84□□□□□ -0.83
SMAD4-203ENST00000585448 KCNC4Q03721 635 aa9.84□□□□□ -0.83
SMAD4-203ENST00000585448 SKIV2LQ15477 1246 aaKnown RBP9.84□□□□□ -0.83
SMAD4-203ENST00000585448 SCUBE3Q8IX30 993 aa9.84□□□□□ -0.83
SMAD4-203ENST00000585448 MOXD2PA6NHM9 499 aa9.83□□□□□ -0.84
SMAD4-203ENST00000585448 Q3C1V9 767 aa9.83□□□□□ -0.84
SMAD4-203ENST00000585448 PUS10Q3MIT2 529 aaKnown RBP9.83□□□□□ -0.84
SMAD4-203ENST00000585448 THAP11Q96EK4 314 aa9.83□□□□□ -0.84
SMAD4-203ENST00000585448 SLC27A5Q9Y2P5 690 aa9.83□□□□□ -0.84
SMAD4-203ENST00000585448 FDX1P10109 184 aa9.82□□□□□ -0.84
SMAD4-203ENST00000585448 PRPF38BQ5VTL8 546 aaKnown RBP9.82□□□□□ -0.84
SMAD4-203ENST00000585448 CLK2P49760 499 aaKnown RBP9.81□□□□□ -0.84
SMAD4-203ENST00000585448 RIC3Q7Z5B4 369 aa9.81□□□□□ -0.84
SMAD4-203ENST00000585448 IL27Q8NEV9 243 aa9.81□□□□□ -0.84
SMAD4-203ENST00000585448 COPS2P61201 443 aa9.8□□□□□ -0.84
SMAD4-203ENST00000585448 BRICD5Q6PL45 260 aa9.8□□□□□ -0.84
SMAD4-203ENST00000585448 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.8□□□□□ -0.84
SMAD4-203ENST00000585448 PCDHGC3Q9UN70 934 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms