RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 CHIC2Q9UKJ5 165 aa20.86■□□□□ 0.93
COPS3-218ENST00000584216 POTEAQ6S8J7 498 aa20.85■□□□□ 0.93
COPS3-218ENST00000584216 RPRD2Q5VT52 1461 aaKnown RBP20.85■□□□□ 0.93
COPS3-218ENST00000584216 RBM33Q96EV2 1170 aaKnown RBP20.83■□□□□ 0.93
COPS3-218ENST00000584216 SLAIN2Q9P270 581 aa20.83■□□□□ 0.93
COPS3-218ENST00000584216 JCADQ9P266 1359 aa20.83■□□□□ 0.92
COPS3-218ENST00000584216 PPP1R15AO75807 674 aaPredicted RBP20.82■□□□□ 0.92
COPS3-218ENST00000584216 PLEKHG1Q9ULL1 1385 aa20.82■□□□□ 0.92
COPS3-218ENST00000584216 ADGRL2O95490 1459 aa20.8■□□□□ 0.92
COPS3-218ENST00000584216 NCOA3Q9Y6Q9 1424 aa20.79■□□□□ 0.92
COPS3-218ENST00000584216 ZFYVE9O95405 1425 aa20.78■□□□□ 0.92
COPS3-218ENST00000584216 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.77■□□□□ 0.92
COPS3-218ENST00000584216 ANKRD50Q9ULJ7 1429 aa20.77■□□□□ 0.91
COPS3-218ENST00000584216 RIMS2Q9UQ26 1411 aa20.77■□□□□ 0.91
COPS3-218ENST00000584216 PHLPP1O60346 1717 aa20.75■□□□□ 0.91
COPS3-218ENST00000584216 TBX22Q9Y458 520 aa20.75■□□□□ 0.91
COPS3-218ENST00000584216 C14orf37Q86TY3 774 aa20.74■□□□□ 0.91
COPS3-218ENST00000584216 SPATA31A6Q5VVP1 1343 aa20.74■□□□□ 0.91
COPS3-218ENST00000584216 CADPS2Q86UW7 1296 aa20.72■□□□□ 0.91
COPS3-218ENST00000584216 FAM50AQ14320 339 aaKnown RBP20.71■□□□□ 0.91
COPS3-218ENST00000584216 MEX3CQ5U5Q3 659 aaKnown RBP20.71■□□□□ 0.91
COPS3-218ENST00000584216 PIK3R4Q99570 1358 aa20.71■□□□□ 0.91
COPS3-218ENST00000584216 ATF3P18847 181 aa20.7■□□□□ 0.9
COPS3-218ENST00000584216 ZNF772Q68DY9 489 aaPredicted RBP20.7■□□□□ 0.9
COPS3-218ENST00000584216 CHD2O14647 1828 aaKnown RBP20.69■□□□□ 0.9
COPS3-218ENST00000584216 DIP2AQ14689 1571 aa20.69■□□□□ 0.9
COPS3-218ENST00000584216 TMEM131LA2VDJ0 1609 aa20.69■□□□□ 0.9
COPS3-218ENST00000584216 C19orf44Q9H6X5 657 aa20.69■□□□□ 0.9
COPS3-218ENST00000584216 COL16A1Q07092 1604 aaPredicted RBP20.68■□□□□ 0.9
COPS3-218ENST00000584216 CHGAP10645 457 aaKnown RBP20.68■□□□□ 0.9
COPS3-218ENST00000584216 GCC2Q8IWJ2 1684 aa20.67■□□□□ 0.9
COPS3-218ENST00000584216 AHDC1Q5TGY3 1603 aaPredicted RBP20.64■□□□□ 0.9
COPS3-218ENST00000584216 ADAMTS13Q76LX8 1427 aa20.64■□□□□ 0.89
COPS3-218ENST00000584216 LRP6O75581 1613 aa20.63■□□□□ 0.89
COPS3-218ENST00000584216 SETD1AO15047 1707 aaKnown RBP20.62■□□□□ 0.89
COPS3-218ENST00000584216 UNC13BO14795 1591 aa20.62■□□□□ 0.89
COPS3-218ENST00000584216 TRPM2O94759 1503 aa20.62■□□□□ 0.89
COPS3-218ENST00000584216 MYO5BQ9ULV0 1848 aa20.6■□□□□ 0.89
COPS3-218ENST00000584216 DCCP43146 1447 aa20.6■□□□□ 0.89
COPS3-218ENST00000584216 SHPRHQ149N8 1683 aa20.59■□□□□ 0.89
COPS3-218ENST00000584216 NUTM2DQ5VT03 806 aaPredicted RBP20.59■□□□□ 0.89
COPS3-218ENST00000584216 ROCK1Q13464 1354 aa20.59■□□□□ 0.89
COPS3-218ENST00000584216 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.58■□□□□ 0.89
COPS3-218ENST00000584216 RXRBP28702 533 aa20.58■□□□□ 0.89
COPS3-218ENST00000584216 TRIM52Q96A61 297 aa20.58■□□□□ 0.89
COPS3-218ENST00000584216 AMOTL2Q9Y2J4 779 aa20.58■□□□□ 0.89
COPS3-218ENST00000584216 BRINP3Q76B58 766 aa20.57■□□□□ 0.88
COPS3-218ENST00000584216 UPF1Q92900 1129 aaKnown RBP eCLIP20.57■□□□□ 0.88
COPS3-218ENST00000584216 E9PCH4 1651 aa20.55■□□□□ 0.88
COPS3-218ENST00000584216 IQGAP3Q86VI3 1631 aa20.55■□□□□ 0.88
COPS3-218ENST00000584216 CDK12Q9NYV4 1490 aaPredicted RBP20.55■□□□□ 0.88
COPS3-218ENST00000584216 NUP155O75694 1391 aa20.53■□□□□ 0.88
COPS3-218ENST00000584216 NUTM2BA6NNL0 878 aaPredicted RBP20.52■□□□□ 0.88
COPS3-218ENST00000584216 NUTM2EB1AL46 878 aaPredicted RBP20.52■□□□□ 0.88
COPS3-218ENST00000584216 NUTM2AQ8IVF1 878 aaPredicted RBP20.52■□□□□ 0.88
COPS3-218ENST00000584216 SETD5Q9C0A6 1442 aa20.52■□□□□ 0.87
COPS3-218ENST00000584216 ASXL1Q8IXJ9 1541 aa20.51■□□□□ 0.87
COPS3-218ENST00000584216 PTPRUQ92729 1446 aa20.51■□□□□ 0.87
COPS3-218ENST00000584216 LRRC59Q96AG4 307 aaKnown RBP20.5■□□□□ 0.87
COPS3-218ENST00000584216 SETBP1Q9Y6X0 1596 aa20.49■□□□□ 0.87
COPS3-218ENST00000584216 AFF2P51816 1311 aa20.48■□□□□ 0.87
COPS3-218ENST00000584216 MST1RQ04912 1400 aa20.47■□□□□ 0.87
COPS3-218ENST00000584216 ZNF326Q5BKZ1 582 aaKnown RBP20.47■□□□□ 0.87
COPS3-218ENST00000584216 XRN1Q8IZH2 1706 aaKnown RBP20.46■□□□□ 0.87
COPS3-218ENST00000584216 ADGRL3Q9HAR2 1447 aa20.44■□□□□ 0.86
COPS3-218ENST00000584216 C8orf37Q96NL8 207 aa20.43■□□□□ 0.86
COPS3-218ENST00000584216 NHSL1Q5SYE7 1610 aa20.42■□□□□ 0.86
COPS3-218ENST00000584216 RBM6P78332 1123 aaKnown RBP20.42■□□□□ 0.86
COPS3-218ENST00000584216 METP08581 1390 aa20.42■□□□□ 0.86
COPS3-218ENST00000584216 NRXN3Q9Y4C0 1643 aa20.42■□□□□ 0.86
COPS3-218ENST00000584216 PNPLA6Q8IY17 1366 aa20.4■□□□□ 0.86
COPS3-218ENST00000584216 QTRT2Q9H974 415 aaKnown RBP20.4■□□□□ 0.86
COPS3-218ENST00000584216 ITGAEP38570 1179 aa20.39■□□□□ 0.85
COPS3-218ENST00000584216 NGLY1Q96IV0 654 aa20.39■□□□□ 0.85
COPS3-218ENST00000584216 SPHKAPQ2M3C7 1700 aa20.38■□□□□ 0.85
COPS3-218ENST00000584216 RGS12O14924 1447 aa20.37■□□□□ 0.85
COPS3-218ENST00000584216 FOXD1Q16676 465 aa20.34■□□□□ 0.85
COPS3-218ENST00000584216 C1orf167Q5SNV9 1468 aa20.34■□□□□ 0.85
COPS3-218ENST00000584216 PTCH1Q13635 1447 aa20.34■□□□□ 0.85
COPS3-218ENST00000584216 NEXMIFQ5QGS0 1516 aa20.33■□□□□ 0.85
COPS3-218ENST00000584216 DDX17Q92841 729 aaKnown RBP20.33■□□□□ 0.85
COPS3-218ENST00000584216 ADAMTS2O95450 1211 aa20.32■□□□□ 0.84
COPS3-218ENST00000584216 ATAD2Q6PL18 1390 aa20.32■□□□□ 0.84
COPS3-218ENST00000584216 NALCNQ8IZF0 1738 aa20.31■□□□□ 0.84
COPS3-218ENST00000584216 VGFO15240 615 aaPredicted RBP20.31■□□□□ 0.84
COPS3-218ENST00000584216 SOS2Q07890 1332 aaPredicted RBP20.29■□□□□ 0.84
COPS3-218ENST00000584216 USP21Q9UK80 565 aa20.29■□□□□ 0.84
COPS3-218ENST00000584216 TRPC5Q9UL62 973 aaPredicted RBP20.29■□□□□ 0.84
COPS3-218ENST00000584216 LAMC1P11047 1609 aa20.28■□□□□ 0.84
COPS3-218ENST00000584216 CLTCL1P53675 1640 aa20.28■□□□□ 0.84
COPS3-218ENST00000584216 PRAG1Q86YV5 1406 aa20.27■□□□□ 0.84
COPS3-218ENST00000584216 HFM1A2PYH4 1435 aa20.26■□□□□ 0.83
COPS3-218ENST00000584216 RPGRIP1LQ68CZ1 1315 aa20.26■□□□□ 0.83
COPS3-218ENST00000584216 ROBO2Q9HCK4 1378 aa20.25■□□□□ 0.83
COPS3-218ENST00000584216 FNBP4Q8N3X1 1017 aaPredicted RBP20.25■□□□□ 0.83
COPS3-218ENST00000584216 ORAI2Q96SN7 254 aa20.25■□□□□ 0.83
COPS3-218ENST00000584216 NPHP3Q7Z494 1330 aa20.23■□□□□ 0.83
COPS3-218ENST00000584216 KIF1BO60333 1816 aa20.23■□□□□ 0.83
COPS3-218ENST00000584216 ATRNO75882 1429 aa20.2■□□□□ 0.82
COPS3-218ENST00000584216 CCDC125Q86Z20 511 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms