RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 BCANQ96GW7 911 aa32.34■■■□□ 2.77
PPP4R1-228ENST00000584074 PPP1R15AO75807 674 aaPredicted RBP32.32■■■□□ 2.76
PPP4R1-228ENST00000584074 HDGFP51858 240 aaKnown RBP32.32■■■□□ 2.76
PPP4R1-228ENST00000584074 PIP4K2BP78356 416 aa32.32■■■□□ 2.76
PPP4R1-228ENST00000584074 SCAF1Q9H7N4 1312 aaKnown RBP32.31■■■□□ 2.76
PPP4R1-228ENST00000584074 TRIM52Q96A61 297 aa32.31■■■□□ 2.76
PPP4R1-228ENST00000584074 PLEKHG1Q9ULL1 1385 aa32.3■■■□□ 2.76
PPP4R1-228ENST00000584074 NUTM2DQ5VT03 806 aaPredicted RBP32.29■■■□□ 2.76
PPP4R1-228ENST00000584074 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.28■■■□□ 2.76
PPP4R1-228ENST00000584074 SPHKAPQ2M3C7 1700 aa32.26■■■□□ 2.76
PPP4R1-228ENST00000584074 KCNA6P17658 529 aa32.26■■■□□ 2.75
PPP4R1-228ENST00000584074 ALKQ9UM73 1620 aa32.25■■■□□ 2.75
PPP4R1-228ENST00000584074 SLC4A1APQ9BWU0 796 aaKnown RBP32.2■■■□□ 2.75
PPP4R1-228ENST00000584074 TRPM2O94759 1503 aa32.18■■■□□ 2.74
PPP4R1-228ENST00000584074 TMEM94Q12767 1356 aa32.18■■■□□ 2.74
PPP4R1-228ENST00000584074 HSPA1LP34931 641 aa32.17■■■□□ 2.74
PPP4R1-228ENST00000584074 PROSER2Q86WR7 435 aaPredicted RBP32.17■■■□□ 2.74
PPP4R1-228ENST00000584074 RBM33Q96EV2 1170 aaKnown RBP32.17■■■□□ 2.74
PPP4R1-228ENST00000584074 TBX22Q9Y458 520 aa32.17■■■□□ 2.74
PPP4R1-228ENST00000584074 CLTCL1P53675 1640 aa32.16■■■□□ 2.74
PPP4R1-228ENST00000584074 XIRP1Q702N8 1843 aaKnown RBP32.15■■■□□ 2.74
PPP4R1-228ENST00000584074 ZNF326Q5BKZ1 582 aaKnown RBP32.15■■■□□ 2.74
PPP4R1-228ENST00000584074 ADAMTS13Q76LX8 1427 aa32.15■■■□□ 2.74
PPP4R1-228ENST00000584074 NWD1Q149M9 1564 aa32.15■■■□□ 2.74
PPP4R1-228ENST00000584074 NKTRP30414 1462 aaKnown RBP32.12■■■□□ 2.73
PPP4R1-228ENST00000584074 FOXD1Q16676 465 aa32.08■■■□□ 2.73
PPP4R1-228ENST00000584074 DISP3Q9P2K9 1392 aa32.07■■■□□ 2.73
PPP4R1-228ENST00000584074 DIP2AQ14689 1571 aa32.06■■■□□ 2.72
PPP4R1-228ENST00000584074 CHD2O14647 1828 aaKnown RBP32.05■■■□□ 2.72
PPP4R1-228ENST00000584074 MPHOSPH9Q99550 1183 aa32.02■■■□□ 2.72
PPP4R1-228ENST00000584074 PIK3R4Q99570 1358 aa32.02■■■□□ 2.72
PPP4R1-228ENST00000584074 NEXMIFQ5QGS0 1516 aa32.01■■■□□ 2.72
PPP4R1-228ENST00000584074 SETD5Q9C0A6 1442 aa32■■■□□ 2.71
PPP4R1-228ENST00000584074 SETBP1Q9Y6X0 1596 aa31.99■■■□□ 2.71
PPP4R1-228ENST00000584074 KIF1BO60333 1816 aa31.99■■■□□ 2.71
PPP4R1-228ENST00000584074 NRXN3Q9Y4C0 1643 aa31.99■■■□□ 2.71
PPP4R1-228ENST00000584074 PTPRUQ92729 1446 aa31.98■■■□□ 2.71
PPP4R1-228ENST00000584074 MSH6P52701 1360 aa31.97■■■□□ 2.71
PPP4R1-228ENST00000584074 AMOTL2Q9Y2J4 779 aa31.97■■■□□ 2.71
PPP4R1-228ENST00000584074 METP08581 1390 aa31.93■■■□□ 2.7
PPP4R1-228ENST00000584074 FAM135BQ49AJ0 1406 aa31.92■■■□□ 2.7
PPP4R1-228ENST00000584074 C14orf37Q86TY3 774 aa31.91■■■□□ 2.7
PPP4R1-228ENST00000584074 VGFO15240 615 aaPredicted RBP31.9■■■□□ 2.7
PPP4R1-228ENST00000584074 ACIN1Q9UKV3 1341 aaKnown RBP31.9■■■□□ 2.7
PPP4R1-228ENST00000584074 RAB3GAP2Q9H2M9 1393 aa31.9■■■□□ 2.7
PPP4R1-228ENST00000584074 NCOA3Q9Y6Q9 1424 aa31.9■■■□□ 2.7
PPP4R1-228ENST00000584074 RPGRIP1LQ68CZ1 1315 aa31.89■■■□□ 2.7
PPP4R1-228ENST00000584074 CCDC144AA2RUR9 1427 aa31.89■■■□□ 2.7
PPP4R1-228ENST00000584074 SLAIN2Q9P270 581 aa31.87■■■□□ 2.69
PPP4R1-228ENST00000584074 XRN1Q8IZH2 1706 aaKnown RBP31.84■■■□□ 2.69
PPP4R1-228ENST00000584074 ILDR2Q71H61 639 aa31.84■■■□□ 2.69
PPP4R1-228ENST00000584074 RGL3Q3MIN7 710 aa31.83■■■□□ 2.69
PPP4R1-228ENST00000584074 C19orf44Q9H6X5 657 aa31.83■■■□□ 2.69
PPP4R1-228ENST00000584074 ROBO1Q9Y6N7 1651 aa31.83■■■□□ 2.69
PPP4R1-228ENST00000584074 SPATA31E1Q6ZUB1 1445 aa31.81■■■□□ 2.68
PPP4R1-228ENST00000584074 MED1Q15648 1581 aaPredicted RBP31.8■■■□□ 2.68
PPP4R1-228ENST00000584074 ATF3P18847 181 aa31.78■■■□□ 2.68
PPP4R1-228ENST00000584074 PPLO60437 1756 aa31.78■■■□□ 2.68
PPP4R1-228ENST00000584074 CADPS2Q86UW7 1296 aa31.77■■■□□ 2.68
PPP4R1-228ENST00000584074 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.77■■■□□ 2.68
PPP4R1-228ENST00000584074 ADGRF5Q8IZF2 1346 aa31.74■■■□□ 2.67
PPP4R1-228ENST00000584074 SETD1AO15047 1707 aaKnown RBP31.72■■■□□ 2.67
PPP4R1-228ENST00000584074 ANKRD30BQ9BXX2 1392 aa31.69■■■□□ 2.66
PPP4R1-228ENST00000584074 DCCP43146 1447 aa31.67■■■□□ 2.66
PPP4R1-228ENST00000584074 ROBO2Q9HCK4 1378 aa31.67■■■□□ 2.66
PPP4R1-228ENST00000584074 HRCP23327 699 aa31.66■■■□□ 2.66
PPP4R1-228ENST00000584074 ADGRL3Q9HAR2 1447 aa31.65■■■□□ 2.66
PPP4R1-228ENST00000584074 PTCH1Q13635 1447 aa31.64■■■□□ 2.66
PPP4R1-228ENST00000584074 IFT172Q9UG01 1749 aa31.63■■■□□ 2.65
PPP4R1-228ENST00000584074 PHF23Q9BUL5 403 aaPredicted RBP31.62■■■□□ 2.65
PPP4R1-228ENST00000584074 PHLPP1O60346 1717 aa31.61■■■□□ 2.65
PPP4R1-228ENST00000584074 BRINP3Q76B58 766 aa31.61■■■□□ 2.65
PPP4R1-228ENST00000584074 MST1RQ04912 1400 aa31.6■■■□□ 2.65
PPP4R1-228ENST00000584074 PRAG1Q86YV5 1406 aa31.6■■■□□ 2.65
PPP4R1-228ENST00000584074 NALCNQ8IZF0 1738 aa31.59■■■□□ 2.65
PPP4R1-228ENST00000584074 PIK3C2GO75747 1445 aa31.58■■■□□ 2.65
PPP4R1-228ENST00000584074 TMEM132EQ6IEE7 984 aa31.56■■■□□ 2.64
PPP4R1-228ENST00000584074 STK26Q9P289 416 aa31.55■■■□□ 2.64
PPP4R1-228ENST00000584074 COL16A1Q07092 1604 aaPredicted RBP31.55■■■□□ 2.64
PPP4R1-228ENST00000584074 JCADQ9P266 1359 aa31.54■■■□□ 2.64
PPP4R1-228ENST00000584074 AHDC1Q5TGY3 1603 aaPredicted RBP31.53■■■□□ 2.64
PPP4R1-228ENST00000584074 ASXL1Q8IXJ9 1541 aa31.52■■■□□ 2.64
PPP4R1-228ENST00000584074 SOCS7O14512 581 aa31.51■■■□□ 2.63
PPP4R1-228ENST00000584074 LRPPRCP42704 1394 aaKnown RBP31.51■■■□□ 2.63
PPP4R1-228ENST00000584074 MYOM2P54296 1465 aa31.5■■■□□ 2.63
PPP4R1-228ENST00000584074 NRXN1Q9ULB1 1477 aa31.5■■■□□ 2.63
PPP4R1-228ENST00000584074 C14orf93Q9H972 538 aaKnown RBP31.49■■■□□ 2.63
PPP4R1-228ENST00000584074 TECPR2O15040 1411 aa31.48■■■□□ 2.63
PPP4R1-228ENST00000584074 ABCC11Q96J66 1382 aa31.47■■■□□ 2.63
PPP4R1-228ENST00000584074 CFAP70Q5T0N1 1121 aa31.47■■■□□ 2.63
PPP4R1-228ENST00000584074 C1orf167Q5SNV9 1468 aa31.46■■■□□ 2.63
PPP4R1-228ENST00000584074 WAPLQ7Z5K2 1190 aa31.46■■■□□ 2.63
PPP4R1-228ENST00000584074 RGS17Q9UGC6 210 aaPredicted RBP31.46■■■□□ 2.63
PPP4R1-228ENST00000584074 YTHDC2Q9H6S0 1430 aaKnown RBP31.44■■■□□ 2.62
PPP4R1-228ENST00000584074 DDX17Q92841 729 aaKnown RBP31.44■■■□□ 2.62
PPP4R1-228ENST00000584074 PLEKHH1Q9ULM0 1364 aa31.42■■■□□ 2.62
PPP4R1-228ENST00000584074 ORAI2Q96SN7 254 aa31.4■■■□□ 2.62
PPP4R1-228ENST00000584074 KDM2AQ9Y2K7 1162 aa31.4■■■□□ 2.62
PPP4R1-228ENST00000584074 NHSL1Q5SYE7 1610 aa31.39■■■□□ 2.62
PPP4R1-228ENST00000584074 DCAF11Q8TEB1 546 aa31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms