RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 EXOC6Q8TAG9 804 aa14.36□□□□□ -0.11
CDK5RAP3-225ENST00000582482 PTPRTO14522 1441 aa14.35□□□□□ -0.11
CDK5RAP3-225ENST00000582482 DEPDC5O75140 1603 aa14.35□□□□□ -0.11
CDK5RAP3-225ENST00000582482 TNNT2P45379 298 aaPredicted RBP14.35□□□□□ -0.11
CDK5RAP3-225ENST00000582482 TRAK1Q9UPV9 953 aa14.35□□□□□ -0.11
CDK5RAP3-225ENST00000582482 KANK1Q14678 1352 aa14.35□□□□□ -0.11
CDK5RAP3-225ENST00000582482 EIF2AK4Q9P2K8 1649 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-225ENST00000582482 PPRC1Q5VV67 1664 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-225ENST00000582482 SAFB2Q14151 953 aaKnown RBP eCLIP14.34□□□□□ -0.11
CDK5RAP3-225ENST00000582482 TET3O43151 1660 aa14.34□□□□□ -0.11
CDK5RAP3-225ENST00000582482 CD109Q6YHK3 1445 aa14.34□□□□□ -0.11
CDK5RAP3-225ENST00000582482 IQGAP1P46940 1657 aa14.33□□□□□ -0.12
CDK5RAP3-225ENST00000582482 KNSTRNQ9Y448 316 aa14.33□□□□□ -0.12
CDK5RAP3-225ENST00000582482 PPP2R1AP30153 589 aa14.33□□□□□ -0.12
CDK5RAP3-225ENST00000582482 AMER1Q5JTC6 1135 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-225ENST00000582482 CCDC136Q96JN2 1154 aa14.33□□□□□ -0.12
CDK5RAP3-225ENST00000582482 CYB5RLQ6IPT4 315 aa14.32□□□□□ -0.12
CDK5RAP3-225ENST00000582482 NOS1P29475 1434 aa14.32□□□□□ -0.12
CDK5RAP3-225ENST00000582482 ABCA6Q8N139 1617 aa14.32□□□□□ -0.12
CDK5RAP3-225ENST00000582482 CARD14Q9BXL6 1004 aa14.31□□□□□ -0.12
CDK5RAP3-225ENST00000582482 LAMC1P11047 1609 aa14.31□□□□□ -0.12
CDK5RAP3-225ENST00000582482 VWDEQ8N2E2 1590 aa14.31□□□□□ -0.12
CDK5RAP3-225ENST00000582482 SCAF11Q99590 1463 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-225ENST00000582482 RCAN3Q9UKA8 241 aa14.3□□□□□ -0.12
CDK5RAP3-225ENST00000582482 FRMPD1Q5SYB0 1578 aa14.3□□□□□ -0.12
CDK5RAP3-225ENST00000582482 ARAP3Q8WWN8 1544 aa14.29□□□□□ -0.12
CDK5RAP3-225ENST00000582482 RRP1P56182 461 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-225ENST00000582482 C20orf194Q5TEA3 1177 aa14.29□□□□□ -0.12
CDK5RAP3-225ENST00000582482 RNF123Q5XPI4 1314 aa14.29□□□□□ -0.12
CDK5RAP3-225ENST00000582482 WASHC2CQ9Y4E1 1318 aa14.29□□□□□ -0.12
CDK5RAP3-225ENST00000582482 NPATQ14207 1427 aa14.28□□□□□ -0.12
CDK5RAP3-225ENST00000582482 MYOM1P52179 1685 aa14.28□□□□□ -0.12
CDK5RAP3-225ENST00000582482 PLEKHH1Q9ULM0 1364 aa14.28□□□□□ -0.12
CDK5RAP3-225ENST00000582482 EFCAB6Q5THR3 1501 aa14.28□□□□□ -0.12
CDK5RAP3-225ENST00000582482 ZNF518AQ6AHZ1 1483 aa14.26□□□□□ -0.13
CDK5RAP3-225ENST00000582482 POGZQ7Z3K3 1410 aa14.26□□□□□ -0.13
CDK5RAP3-225ENST00000582482 ANP32EQ9BTT0 268 aa14.26□□□□□ -0.13
CDK5RAP3-225ENST00000582482 SLC12A5Q9H2X9 1139 aa14.26□□□□□ -0.13
CDK5RAP3-225ENST00000582482 SPINK5Q9NQ38 1064 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-225ENST00000582482 DMRT2Q9Y5R5 561 aa14.26□□□□□ -0.13
CDK5RAP3-225ENST00000582482 ERVK-7P63135 1459 aa14.26□□□□□ -0.13
CDK5RAP3-225ENST00000582482 STK26Q9P289 416 aa14.25□□□□□ -0.13
CDK5RAP3-225ENST00000582482 MAP3K4Q9Y6R4 1608 aa14.25□□□□□ -0.13
CDK5RAP3-225ENST00000582482 YEATS2Q9ULM3 1422 aa14.25□□□□□ -0.13
CDK5RAP3-225ENST00000582482 NCBP3Q53F19 620 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-225ENST00000582482 KIF1BO60333 1816 aa14.24□□□□□ -0.13
CDK5RAP3-225ENST00000582482 SIGLEC1Q9BZZ2 1709 aa14.24□□□□□ -0.13
CDK5RAP3-225ENST00000582482 WDR43Q15061 677 aaKnown RBP eCLIP14.23□□□□□ -0.13
CDK5RAP3-225ENST00000582482 BLMP54132 1417 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-225ENST00000582482 FBXO31Q5XUX0 539 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-225ENST00000582482 CRBNQ96SW2 442 aa14.22□□□□□ -0.13
CDK5RAP3-225ENST00000582482 RRP7AQ9Y3A4 280 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-225ENST00000582482 APAF1O14727 1248 aa14.21□□□□□ -0.13
CDK5RAP3-225ENST00000582482 NEUROD2Q15784 382 aa14.21□□□□□ -0.13
CDK5RAP3-225ENST00000582482 ERICH6BQ5W0A0 696 aa14.21□□□□□ -0.13
CDK5RAP3-225ENST00000582482 MLECQ14165 292 aa14.2□□□□□ -0.14
CDK5RAP3-225ENST00000582482 ASXL1Q8IXJ9 1541 aa14.2□□□□□ -0.14
CDK5RAP3-225ENST00000582482 NPM3O75607 178 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP3-225ENST00000582482 CABP2Q9NPB3 220 aa14.19□□□□□ -0.14
CDK5RAP3-225ENST00000582482 CENPJQ9HC77 1338 aaPredicted RBP14.19□□□□□ -0.14
CDK5RAP3-225ENST00000582482 HECW2Q9P2P5 1572 aa14.19□□□□□ -0.14
CDK5RAP3-225ENST00000582482 IFT172Q9UG01 1749 aa14.19□□□□□ -0.14
CDK5RAP3-225ENST00000582482 SYNMO15061 1565 aa14.19□□□□□ -0.14
CDK5RAP3-225ENST00000582482 KDM5AP29375 1690 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP3-225ENST00000582482 IDI1Q13907 227 aa14.19□□□□□ -0.14
CDK5RAP3-225ENST00000582482 ABCC3O15438 1527 aa14.18□□□□□ -0.14
CDK5RAP3-225ENST00000582482 ADGRB3O60242 1522 aa14.18□□□□□ -0.14
CDK5RAP3-225ENST00000582482 EIF3AQ14152 1382 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-225ENST00000582482 NSD3Q9BZ95 1437 aa14.16□□□□□ -0.14
CDK5RAP3-225ENST00000582482 TSPOAP1O95153 1857 aa14.16□□□□□ -0.14
CDK5RAP3-225ENST00000582482 PAK3O75914 559 aaPredicted RBP14.16□□□□□ -0.14
CDK5RAP3-225ENST00000582482 NPM2Q86SE8 214 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP3-225ENST00000582482 MYOM2P54296 1465 aa14.16□□□□□ -0.14
CDK5RAP3-225ENST00000582482 DUSP27Q5VZP5 1158 aa14.16□□□□□ -0.14
CDK5RAP3-225ENST00000582482 ZMYM4Q5VZL5 1548 aa14.15□□□□□ -0.14
CDK5RAP3-225ENST00000582482 C14orf93Q9H972 538 aaKnown RBP14.15□□□□□ -0.14
CDK5RAP3-225ENST00000582482 FAM69CQ0P6D2 419 aa14.15□□□□□ -0.14
CDK5RAP3-225ENST00000582482 CDCA8Q53HL2 280 aa14.15□□□□□ -0.14
CDK5RAP3-225ENST00000582482 PIK3C2GO75747 1445 aa14.15□□□□□ -0.14
CDK5RAP3-225ENST00000582482 MLH3Q9UHC1 1453 aa14.14□□□□□ -0.15
CDK5RAP3-225ENST00000582482 DIP2CQ9Y2E4 1556 aa14.14□□□□□ -0.15
CDK5RAP3-225ENST00000582482 MYO5BQ9ULV0 1848 aa14.14□□□□□ -0.15
CDK5RAP3-225ENST00000582482 PPLO60437 1756 aa14.14□□□□□ -0.15
CDK5RAP3-225ENST00000582482 BCAR3O75815 825 aa14.14□□□□□ -0.15
CDK5RAP3-225ENST00000582482 FBLN1P23142 703 aa14.13□□□□□ -0.15
CDK5RAP3-225ENST00000582482 QRICH2Q9H0J4 1663 aa14.13□□□□□ -0.15
CDK5RAP3-225ENST00000582482 MINK1Q8N4C8 1332 aaPredicted RBP14.13□□□□□ -0.15
CDK5RAP3-225ENST00000582482 CAMSAP1Q5T5Y3 1602 aa14.13□□□□□ -0.15
CDK5RAP3-225ENST00000582482 ADGRB1O14514 1584 aa14.12□□□□□ -0.15
CDK5RAP3-225ENST00000582482 NRXN1Q9ULB1 1477 aa14.12□□□□□ -0.15
CDK5RAP3-225ENST00000582482 LMTK2Q8IWU2 1503 aa14.12□□□□□ -0.15
CDK5RAP3-225ENST00000582482 MORC1Q86VD1 984 aa14.12□□□□□ -0.15
CDK5RAP3-225ENST00000582482 FANCIQ9NVI1 1328 aa14.11□□□□□ -0.15
CDK5RAP3-225ENST00000582482 KIAA1210Q9ULL0 1709 aa14.11□□□□□ -0.15
CDK5RAP3-225ENST00000582482 PDE3BQ13370 1112 aa14.1□□□□□ -0.15
CDK5RAP3-225ENST00000582482 ZNF521Q96K83 1311 aa14.1□□□□□ -0.15
CDK5RAP3-225ENST00000582482 GOLGA2Q08379 1002 aa14.09□□□□□ -0.15
CDK5RAP3-225ENST00000582482 TNNQ9UQP3 1299 aa14.09□□□□□ -0.15
CDK5RAP3-225ENST00000582482 RICTORQ6R327 1708 aa14.08□□□□□ -0.15
CDK5RAP3-225ENST00000582482 MTHFSP49914 203 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms