RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 UGGT1Q9NYU2 1555 aa13.3□□□□□ -0.28
CDK5RAP3-221ENST00000581662 THEMISQ8N1K5 641 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP3-221ENST00000581662 PREX2Q70Z35 1606 aa13.3□□□□□ -0.28
CDK5RAP3-221ENST00000581662 RXRBP28702 533 aa13.29□□□□□ -0.28
CDK5RAP3-221ENST00000581662 ATMINO43313 823 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP3-221ENST00000581662 FBXO31Q5XUX0 539 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP3-221ENST00000581662 GGT6Q6P531 493 aa13.28□□□□□ -0.28
CDK5RAP3-221ENST00000581662 ATP7AQ04656 1500 aa13.28□□□□□ -0.28
CDK5RAP3-221ENST00000581662 ASTLQ6HA08 431 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-221ENST00000581662 PELP1Q8IZL8 1130 aaKnown RBP13.27□□□□□ -0.29
CDK5RAP3-221ENST00000581662 RGS12O14924 1447 aa13.27□□□□□ -0.29
CDK5RAP3-221ENST00000581662 LRRC9Q6ZRR7 1453 aa13.27□□□□□ -0.29
CDK5RAP3-221ENST00000581662 INO80Q9ULG1 1556 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-221ENST00000581662 MAP3K1Q13233 1512 aa13.26□□□□□ -0.29
CDK5RAP3-221ENST00000581662 COL16A1Q07092 1604 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-221ENST00000581662 MIA2Q96PC5 1412 aa13.25□□□□□ -0.29
CDK5RAP3-221ENST00000581662 SPATA31A6Q5VVP1 1343 aa13.25□□□□□ -0.29
CDK5RAP3-221ENST00000581662 IFNLR1Q8IU57 520 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-221ENST00000581662 SGIP1Q9BQI5 828 aa13.25□□□□□ -0.29
CDK5RAP3-221ENST00000581662 SPAG9O60271 1321 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-221ENST00000581662 PYGBP11216 843 aa13.24□□□□□ -0.29
CDK5RAP3-221ENST00000581662 GSE1Q14687 1217 aa13.24□□□□□ -0.29
CDK5RAP3-221ENST00000581662 TRPC6Q9Y210 931 aa13.24□□□□□ -0.29
CDK5RAP3-221ENST00000581662 CLIP1P30622 1438 aa13.23□□□□□ -0.29
CDK5RAP3-221ENST00000581662 FGD6Q6ZV73 1430 aa13.23□□□□□ -0.29
CDK5RAP3-221ENST00000581662 PHLPP1O60346 1717 aa13.23□□□□□ -0.29
CDK5RAP3-221ENST00000581662 TMEM94Q12767 1356 aa13.22□□□□□ -0.29
CDK5RAP3-221ENST00000581662 IFFO2Q5TF58 517 aa13.22□□□□□ -0.29
CDK5RAP3-221ENST00000581662 SPOCK2Q92563 424 aa13.22□□□□□ -0.29
CDK5RAP3-221ENST00000581662 BMP2KQ9NSY1 1161 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-221ENST00000581662 CDK11AQ9UQ88 783 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-221ENST00000581662 SYCP2Q9BX26 1530 aa13.22□□□□□ -0.29
CDK5RAP3-221ENST00000581662 ATN1P54259 1190 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP3-221ENST00000581662 SLC39A7Q92504 469 aa13.21□□□□□ -0.29
CDK5RAP3-221ENST00000581662 RBM33Q96EV2 1170 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP3-221ENST00000581662 TIE1P35590 1138 aa13.2□□□□□ -0.3
CDK5RAP3-221ENST00000581662 IFNL1Q8IU54 200 aa13.2□□□□□ -0.3
CDK5RAP3-221ENST00000581662 LRP5O75197 1615 aa13.2□□□□□ -0.3
CDK5RAP3-221ENST00000581662 LRRIQ1Q96JM4 1722 aa13.19□□□□□ -0.3
CDK5RAP3-221ENST00000581662 SCAF11Q99590 1463 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-221ENST00000581662 C7P10643 843 aa13.19□□□□□ -0.3
CDK5RAP3-221ENST00000581662 RANGAP1P46060 587 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-221ENST00000581662 MEX3CQ5U5Q3 659 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-221ENST00000581662 METRNQ9UJH8 293 aa13.19□□□□□ -0.3
CDK5RAP3-221ENST00000581662 ATAD2Q6PL18 1390 aa13.17□□□□□ -0.3
CDK5RAP3-221ENST00000581662 CIZ1Q9ULV3 898 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-221ENST00000581662 ARHGAP23Q9P227 1491 aa13.16□□□□□ -0.3
CDK5RAP3-221ENST00000581662 SHPRHQ149N8 1683 aa13.15□□□□□ -0.3
CDK5RAP3-221ENST00000581662 TTLL13PA6NNM8 815 aa13.15□□□□□ -0.3
CDK5RAP3-221ENST00000581662 TIAM1Q13009 1591 aa13.15□□□□□ -0.3
CDK5RAP3-221ENST00000581662 ADGBQ8N7X0 1667 aa13.15□□□□□ -0.31
CDK5RAP3-221ENST00000581662 KIAA1107Q9UPP5 1409 aa13.14□□□□□ -0.31
CDK5RAP3-221ENST00000581662 AFF2P51816 1311 aa13.13□□□□□ -0.31
CDK5RAP3-221ENST00000581662 CDC42BPAQ5VT25 1732 aa13.13□□□□□ -0.31
CDK5RAP3-221ENST00000581662 EP400Q96L91 3159 aa13.13□□□□□ -0.31
CDK5RAP3-221ENST00000581662 SLIT1O75093 1534 aa13.13□□□□□ -0.31
CDK5RAP3-221ENST00000581662 PRDM15P57071 1507 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-221ENST00000581662 FMN1Q68DA7 1419 aa13.13□□□□□ -0.31
CDK5RAP3-221ENST00000581662 NCOA2Q15596 1464 aa13.12□□□□□ -0.31
CDK5RAP3-221ENST00000581662 NUTM2BA6NNL0 878 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-221ENST00000581662 NUTM2EB1AL46 878 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-221ENST00000581662 LTKP29376 864 aa13.12□□□□□ -0.31
CDK5RAP3-221ENST00000581662 RBM6P78332 1123 aaKnown RBP13.12□□□□□ -0.31
CDK5RAP3-221ENST00000581662 NUTM2DQ5VT03 806 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-221ENST00000581662 NUTM2AQ8IVF1 878 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-221ENST00000581662 TMEM106CQ9BVX2 250 aa13.12□□□□□ -0.31
CDK5RAP3-221ENST00000581662 SLAIN2Q9P270 581 aa13.12□□□□□ -0.31
CDK5RAP3-221ENST00000581662 AHDC1Q5TGY3 1603 aaPredicted RBP13.11□□□□□ -0.31
CDK5RAP3-221ENST00000581662 HNRNPMP52272 730 aaKnown RBP eCLIP13.11□□□□□ -0.31
CDK5RAP3-221ENST00000581662 PCDHB8Q9UN66 801 aa13.11□□□□□ -0.31
CDK5RAP3-221ENST00000581662 ABCC3O15438 1527 aa13.1□□□□□ -0.31
CDK5RAP3-221ENST00000581662 DIP2AQ14689 1571 aa13.1□□□□□ -0.31
CDK5RAP3-221ENST00000581662 NKTRP30414 1462 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-221ENST00000581662 DHX29Q7Z478 1369 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-221ENST00000581662 TRIM35Q9UPQ4 493 aa13.09□□□□□ -0.31
CDK5RAP3-221ENST00000581662 MSH6P52701 1360 aa13.08□□□□□ -0.31
CDK5RAP3-221ENST00000581662 UBR1Q8IWV7 1749 aa13.08□□□□□ -0.32
CDK5RAP3-221ENST00000581662 NWD1Q149M9 1564 aa13.08□□□□□ -0.32
CDK5RAP3-221ENST00000581662 POTEB2H3BUK9 544 aa13.08□□□□□ -0.32
CDK5RAP3-221ENST00000581662 KCNA6P17658 529 aa13.08□□□□□ -0.32
CDK5RAP3-221ENST00000581662 PLEKHH2Q8IVE3 1493 aa13.08□□□□□ -0.32
CDK5RAP3-221ENST00000581662 SEC24BO95487 1268 aa13.07□□□□□ -0.32
CDK5RAP3-221ENST00000581662 ATP1B4Q9UN42 357 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-221ENST00000581662 ERVK-7P63135 1459 aa13.07□□□□□ -0.32
CDK5RAP3-221ENST00000581662 GPATCH8Q9UKJ3 1502 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-221ENST00000581662 NHSL1Q5SYE7 1610 aa13.06□□□□□ -0.32
CDK5RAP3-221ENST00000581662 ZNF777Q9ULD5 760 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-221ENST00000581662 WASHC2CQ9Y4E1 1318 aa13.06□□□□□ -0.32
CDK5RAP3-221ENST00000581662 TXNDC2Q86VQ3 553 aa13.05□□□□□ -0.32
CDK5RAP3-221ENST00000581662 PROSER2Q86WR7 435 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-221ENST00000581662 QTRT2Q9H974 415 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-221ENST00000581662 CHRM1P11229 460 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-221ENST00000581662 ZNF467Q7Z7K2 595 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-221ENST00000581662 CCDC125Q86Z20 511 aa13.04□□□□□ -0.32
CDK5RAP3-221ENST00000581662 RTEL1-TNFRSF6BF6WH68 1400 aa13.04□□□□□ -0.32
CDK5RAP3-221ENST00000581662 CAMSAP2Q08AD1 1489 aa13.04□□□□□ -0.32
CDK5RAP3-221ENST00000581662 KDM5AP29375 1690 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-221ENST00000581662 KIF3BO15066 747 aa13.03□□□□□ -0.32
CDK5RAP3-221ENST00000581662 TET3O43151 1660 aa13.01□□□□□ -0.33
CDK5RAP3-221ENST00000581662 ARHGAP35Q9NRY4 1499 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms