RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 ZNF608Q9ULD9 1512 aaPredicted RBP12.44□□□□□ -0.42
PPP4R1-216ENST00000580283 CYB5RLQ6IPT4 315 aa12.44□□□□□ -0.42
PPP4R1-216ENST00000580283 LMOD2Q6P5Q4 547 aa12.44□□□□□ -0.42
PPP4R1-216ENST00000580283 TATDN2Q93075 761 aa12.42□□□□□ -0.42
PPP4R1-216ENST00000580283 KCTD12Q96CX2 325 aaKnown RBP12.42□□□□□ -0.42
PPP4R1-216ENST00000580283 GNPATO15228 680 aa12.41□□□□□ -0.42
PPP4R1-216ENST00000580283 FAM98CQ17RN3 349 aaKnown RBP12.41□□□□□ -0.42
PPP4R1-216ENST00000580283 NUDT18Q6ZVK8 323 aa12.41□□□□□ -0.42
PPP4R1-216ENST00000580283 TTC13Q8NBP0 860 aa12.41□□□□□ -0.42
PPP4R1-216ENST00000580283 SMAPO00193 183 aa12.4□□□□□ -0.42
PPP4R1-216ENST00000580283 WNT2BQ93097 391 aa12.4□□□□□ -0.42
PPP4R1-216ENST00000580283 GPR37O15354 613 aa12.39□□□□□ -0.43
PPP4R1-216ENST00000580283 ANKK1Q8NFD2 765 aa12.39□□□□□ -0.43
PPP4R1-216ENST00000580283 ZFRQ96KR1 1074 aaKnown RBP12.38□□□□□ -0.43
PPP4R1-216ENST00000580283 ARAP1Q96P48 1450 aa12.37□□□□□ -0.43
PPP4R1-216ENST00000580283 RBM46Q8TBY0 533 aaKnown RBP12.36□□□□□ -0.43
PPP4R1-216ENST00000580283 CHD1O14646 1710 aa12.36□□□□□ -0.43
PPP4R1-216ENST00000580283 PRDM2Q13029 1718 aa12.36□□□□□ -0.43
PPP4R1-216ENST00000580283 C3orf80F5H4A9 247 aa12.35□□□□□ -0.43
PPP4R1-216ENST00000580283 HDGFP51858 240 aaKnown RBP12.35□□□□□ -0.43
PPP4R1-216ENST00000580283 ADGRG1Q9Y653 693 aa12.34□□□□□ -0.43
PPP4R1-216ENST00000580283 FECHP22830 423 aa12.33□□□□□ -0.44
PPP4R1-216ENST00000580283 IFT140Q96RY7 1462 aa12.33□□□□□ -0.44
PPP4R1-216ENST00000580283 FAM161AQ3B820 660 aa12.32□□□□□ -0.44
PPP4R1-216ENST00000580283 THSD4Q6ZMP0 1018 aa12.32□□□□□ -0.44
PPP4R1-216ENST00000580283 LRCH3Q96II8 777 aa12.32□□□□□ -0.44
PPP4R1-216ENST00000580283 EIF4G3O43432 1585 aaKnown RBP12.31□□□□□ -0.44
PPP4R1-216ENST00000580283 OATP04181 439 aa12.31□□□□□ -0.44
PPP4R1-216ENST00000580283 EYA1Q99502 592 aa12.31□□□□□ -0.44
PPP4R1-216ENST00000580283 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.31□□□□□ -0.44
PPP4R1-216ENST00000580283 HCSTQ9UBK5 93 aa12.31□□□□□ -0.44
PPP4R1-216ENST00000580283 PTPN5P54829 565 aa12.3□□□□□ -0.44
PPP4R1-216ENST00000580283 SOWAHBA6NEL2 793 aa12.29□□□□□ -0.44
PPP4R1-216ENST00000580283 BCAMP50895 628 aa12.28□□□□□ -0.44
PPP4R1-216ENST00000580283 SAMD7Q7Z3H4 446 aa12.28□□□□□ -0.44
PPP4R1-216ENST00000580283 TOPBP1Q92547 1522 aa12.27□□□□□ -0.44
PPP4R1-216ENST00000580283 DNAJB2P25686 324 aa12.27□□□□□ -0.45
PPP4R1-216ENST00000580283 SLC4A3P48751 1232 aa12.27□□□□□ -0.45
PPP4R1-216ENST00000580283 MAP2K5Q13163 448 aa12.27□□□□□ -0.45
PPP4R1-216ENST00000580283 ZC3H15Q8WU90 426 aaKnown RBP12.27□□□□□ -0.45
PPP4R1-216ENST00000580283 AQRO60306 1485 aaKnown RBP eCLIP12.27□□□□□ -0.457e-12■□□□□ 9.9
PPP4R1-216ENST00000580283 TOP2AP11388 1531 aaKnown RBP12.27□□□□□ -0.45
PPP4R1-216ENST00000580283 PXYLP1Q8TE99 480 aa12.26□□□□□ -0.45
PPP4R1-216ENST00000580283 RSF1Q96T23 1441 aaPredicted RBP12.26□□□□□ -0.45
PPP4R1-216ENST00000580283 TARBP1Q13395 1621 aaKnown RBP12.26□□□□□ -0.45
PPP4R1-216ENST00000580283 RCCD1A6NED2 376 aa12.25□□□□□ -0.45
PPP4R1-216ENST00000580283 RNF40O75150 1001 aa12.25□□□□□ -0.45
PPP4R1-216ENST00000580283 METTL3Q86U44 580 aaKnown RBP12.25□□□□□ -0.45
PPP4R1-216ENST00000580283 KRI1Q8N9T8 703 aaKnown RBP12.25□□□□□ -0.45
PPP4R1-216ENST00000580283 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.24□□□□□ -0.45
PPP4R1-216ENST00000580283 SWT1Q5T5J6 900 aaKnown RBP12.24□□□□□ -0.45
PPP4R1-216ENST00000580283 MINK1Q8N4C8 1332 aaPredicted RBP12.24□□□□□ -0.45
PPP4R1-216ENST00000580283 HPS5Q9UPZ3 1129 aa12.24□□□□□ -0.45
PPP4R1-216ENST00000580283 TSR3Q9UJK0 312 aaKnown RBP12.23□□□□□ -0.45
PPP4R1-216ENST00000580283 SLF2Q8IX21 1173 aa12.22□□□□□ -0.45
PPP4R1-216ENST00000580283 IRF6O14896 467 aa12.21□□□□□ -0.45
PPP4R1-216ENST00000580283 ZMYND10O75800 440 aa12.21□□□□□ -0.45
PPP4R1-216ENST00000580283 PPP4CP60510 307 aa12.21□□□□□ -0.45
PPP4R1-216ENST00000580283 BARGINQ6ZT62 677 aa12.2□□□□□ -0.46
PPP4R1-216ENST00000580283 TMEM134Q9H6X4 195 aa12.2□□□□□ -0.46
PPP4R1-216ENST00000580283 NECTIN2Q92692 538 aa12.19□□□□□ -0.46
PPP4R1-216ENST00000580283 CCDC88BA6NC98 1476 aa12.19□□□□□ -0.46
PPP4R1-216ENST00000580283 CCDC102AQ96A19 550 aa12.18□□□□□ -0.46
PPP4R1-216ENST00000580283 WBP1LQ9NX94 342 aa12.18□□□□□ -0.46
PPP4R1-216ENST00000580283 DNMBPQ6XZF7 1577 aa12.18□□□□□ -0.46
PPP4R1-216ENST00000580283 CLASP1Q7Z460 1538 aa12.17□□□□□ -0.46
PPP4R1-216ENST00000580283 NYAP1Q6ZVC0 841 aa12.17□□□□□ -0.46
PPP4R1-216ENST00000580283 ABCC8Q09428 1581 aa12.15□□□□□ -0.46
PPP4R1-216ENST00000580283 NLRP7Q8WX94 980 aa12.13□□□□□ -0.47
PPP4R1-216ENST00000580283 PHOX2BQ99453 314 aa12.13□□□□□ -0.47
PPP4R1-216ENST00000580283 DAXXQ9UER7 740 aaPredicted RBP12.13□□□□□ -0.47
PPP4R1-216ENST00000580283 RSPH4AQ5TD94 716 aa12.12□□□□□ -0.47
PPP4R1-216ENST00000580283 POLA1P09884 1462 aaPredicted RBP12.12□□□□□ -0.47
PPP4R1-216ENST00000580283 RAD54L2Q9Y4B4 1467 aa12.12□□□□□ -0.47
PPP4R1-216ENST00000580283 TDRD9Q8NDG6 1382 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-216ENST00000580283 MDM2Q00987 491 aaPredicted RBP12.08□□□□□ -0.48
PPP4R1-216ENST00000580283 PRR14Q9BWN1 585 aa12.08□□□□□ -0.48
PPP4R1-216ENST00000580283 SNAPC4Q5SXM2 1469 aa12.08□□□□□ -0.48
PPP4R1-216ENST00000580283 DDX11L8A8MPP1 907 aa12.07□□□□□ -0.48
PPP4R1-216ENST00000580283 SULF1Q8IWU6 871 aa12.07□□□□□ -0.48
PPP4R1-216ENST00000580283 RDH13Q8NBN7 331 aa12.07□□□□□ -0.48
PPP4R1-216ENST00000580283 AK7Q96M32 723 aa12.07□□□□□ -0.48
PPP4R1-216ENST00000580283 KMT5BQ4FZB7 885 aa12.06□□□□□ -0.48
PPP4R1-216ENST00000580283 CLCN1P35523 988 aa12.05□□□□□ -0.48
PPP4R1-216ENST00000580283 APLP1P51693 650 aa12.05□□□□□ -0.48
PPP4R1-216ENST00000580283 PLA2G2EQ9NZK7 142 aa12.05□□□□□ -0.48
PPP4R1-216ENST00000580283 SYNJ1O43426 1573 aa12.05□□□□□ -0.48
PPP4R1-216ENST00000580283 SOGA1O94964 1423 aa12.04□□□□□ -0.48
PPP4R1-216ENST00000580283 CFHP08603 1231 aa12.04□□□□□ -0.48
PPP4R1-216ENST00000580283 SLC10A3P09131 477 aa12.04□□□□□ -0.48
PPP4R1-216ENST00000580283 SLC24A3Q9HC58 644 aa12.04□□□□□ -0.48
PPP4R1-216ENST00000580283 GAPVD1Q14C86 1478 aa12.03□□□□□ -0.48
PPP4R1-216ENST00000580283 CHMP7Q8WUX9 453 aaPredicted RBP12.03□□□□□ -0.48
PPP4R1-216ENST00000580283 GPCPD1Q9NPB8 672 aa12.03□□□□□ -0.48
PPP4R1-216ENST00000580283 TTLL12Q14166 644 aaPredicted RBP12.02□□□□□ -0.49
PPP4R1-216ENST00000580283 ERCC6L2Q5T890 1561 aa12.01□□□□□ -0.49
PPP4R1-216ENST00000580283 KIF13AQ9H1H9 1805 aa12.01□□□□□ -0.49
PPP4R1-216ENST00000580283 TRIM66O15016 1216 aa12□□□□□ -0.49
PPP4R1-216ENST00000580283 AMHR2Q16671 573 aa12□□□□□ -0.49
PPP4R1-216ENST00000580283 MAGI1Q96QZ7 1491 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms