RNA–Protein interactions for RNA: ENST00000579618.1

SNRPD1-203, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 5 BASIC

Gene SNRPD1, Length 320 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-203ENST00000579618 KIF15Q9NS87 1388 aa15.81■□□□□ 0.12
SNRPD1-203ENST00000579618 DIP2AQ14689 1571 aa15.8■□□□□ 0.12
SNRPD1-203ENST00000579618 IDI1Q13907 227 aa15.8■□□□□ 0.12
SNRPD1-203ENST00000579618 MYO5BQ9ULV0 1848 aa15.8■□□□□ 0.12
SNRPD1-203ENST00000579618 LMTK2Q8IWU2 1503 aa15.79■□□□□ 0.12
SNRPD1-203ENST00000579618 CDK12Q9NYV4 1490 aaPredicted RBP15.79■□□□□ 0.12
SNRPD1-203ENST00000579618 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.79■□□□□ 0.122e-12■■■□□ 15.2
SNRPD1-203ENST00000579618 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.79■□□□□ 0.12
SNRPD1-203ENST00000579618 MYOM3Q5VTT5 1437 aa15.77■□□□□ 0.12
SNRPD1-203ENST00000579618 GCC2Q8IWJ2 1684 aa15.77■□□□□ 0.12
SNRPD1-203ENST00000579618 NOS1P29475 1434 aa15.77■□□□□ 0.11
SNRPD1-203ENST00000579618 RXRBP28702 533 aa15.76■□□□□ 0.11
SNRPD1-203ENST00000579618 ZFYVE9O95405 1425 aa15.76■□□□□ 0.11
SNRPD1-203ENST00000579618 KANK4Q5T7N3 995 aaPredicted RBP15.75■□□□□ 0.11
SNRPD1-203ENST00000579618 BCANQ96GW7 911 aa15.75■□□□□ 0.11
SNRPD1-203ENST00000579618 RGS12O14924 1447 aa15.75■□□□□ 0.11
SNRPD1-203ENST00000579618 KANK1Q14678 1352 aa15.75■□□□□ 0.11
SNRPD1-203ENST00000579618 RRP7BPQ9NSQ0 103 aa15.74■□□□□ 0.11
SNRPD1-203ENST00000579618 SRCAPQ6ZRS2 3230 aa15.73■□□□□ 0.11
SNRPD1-203ENST00000579618 ABCC5O15440 1437 aa15.73■□□□□ 0.11
SNRPD1-203ENST00000579618 PLEKHG1Q9ULL1 1385 aa15.73■□□□□ 0.11
SNRPD1-203ENST00000579618 AFF2P51816 1311 aa15.72■□□□□ 0.11
SNRPD1-203ENST00000579618 NCOA3Q9Y6Q9 1424 aa15.71■□□□□ 0.11
SNRPD1-203ENST00000579618 NUTM2BA6NNL0 878 aaPredicted RBP15.71■□□□□ 0.11
SNRPD1-203ENST00000579618 NUTM2EB1AL46 878 aaPredicted RBP15.71■□□□□ 0.11
SNRPD1-203ENST00000579618 NUTM2AQ8IVF1 878 aaPredicted RBP15.71■□□□□ 0.11
SNRPD1-203ENST00000579618 PTPN23Q9H3S7 1636 aa15.71■□□□□ 0.11
SNRPD1-203ENST00000579618 RIMS2Q9UQ26 1411 aa15.7■□□□□ 0.1
SNRPD1-203ENST00000579618 TMEM131LA2VDJ0 1609 aa15.7■□□□□ 0.1
SNRPD1-203ENST00000579618 NHSL1Q5SYE7 1610 aa15.7■□□□□ 0.1
SNRPD1-203ENST00000579618 DAPK1P53355 1430 aa15.69■□□□□ 0.1
SNRPD1-203ENST00000579618 C14orf37Q86TY3 774 aa15.69■□□□□ 0.1
SNRPD1-203ENST00000579618 ASXL1Q8IXJ9 1541 aa15.68■□□□□ 0.1
SNRPD1-203ENST00000579618 ADAMTS13Q76LX8 1427 aa15.67■□□□□ 0.1
SNRPD1-203ENST00000579618 PPP1R15AO75807 674 aaPredicted RBP15.66■□□□□ 0.1
SNRPD1-203ENST00000579618 BRINP3Q76B58 766 aa15.66■□□□□ 0.1
SNRPD1-203ENST00000579618 CADPS2Q86UW7 1296 aa15.66■□□□□ 0.1
SNRPD1-203ENST00000579618 ATF3P18847 181 aa15.65■□□□□ 0.1
SNRPD1-203ENST00000579618 PPARGC1BQ86YN6 1023 aaKnown RBP15.65■□□□□ 0.1
SNRPD1-203ENST00000579618 SLC52A1Q9NWF4 448 aa15.65■□□□□ 0.1
SNRPD1-203ENST00000579618 SETD5Q9C0A6 1442 aa15.65■□□□□ 0.1
SNRPD1-203ENST00000579618 SETBP1Q9Y6X0 1596 aa15.64■□□□□ 0.09
SNRPD1-203ENST00000579618 NUTM2DQ5VT03 806 aaPredicted RBP15.63■□□□□ 0.09
SNRPD1-203ENST00000579618 C19orf44Q9H6X5 657 aa15.63■□□□□ 0.09
SNRPD1-203ENST00000579618 TBX22Q9Y458 520 aa15.63■□□□□ 0.09
SNRPD1-203ENST00000579618 RPRD2Q5VT52 1461 aaKnown RBP15.63■□□□□ 0.09
SNRPD1-203ENST00000579618 PTPRUQ92729 1446 aa15.62■□□□□ 0.09
SNRPD1-203ENST00000579618 C8orf37Q96NL8 207 aa15.62■□□□□ 0.09
SNRPD1-203ENST00000579618 TRPM2O94759 1503 aa15.62■□□□□ 0.09
SNRPD1-203ENST00000579618 XRN1Q8IZH2 1706 aaKnown RBP15.61■□□□□ 0.09
SNRPD1-203ENST00000579618 RBM6P78332 1123 aaKnown RBP15.61■□□□□ 0.09
SNRPD1-203ENST00000579618 QTRT2Q9H974 415 aaKnown RBP15.61■□□□□ 0.09
SNRPD1-203ENST00000579618 CHIC2Q9UKJ5 165 aa15.61■□□□□ 0.09
SNRPD1-203ENST00000579618 UNC13BO14795 1591 aa15.61■□□□□ 0.09
SNRPD1-203ENST00000579618 DCCP43146 1447 aa15.6■□□□□ 0.09
SNRPD1-203ENST00000579618 MST1RQ04912 1400 aa15.6■□□□□ 0.09
SNRPD1-203ENST00000579618 PNPLA6Q8IY17 1366 aa15.6■□□□□ 0.09
SNRPD1-203ENST00000579618 PIK3R4Q99570 1358 aa15.6■□□□□ 0.09
SNRPD1-203ENST00000579618 ANKRD30AQ9BXX3 1397 aa15.6■□□□□ 0.09
SNRPD1-203ENST00000579618 ATAD2Q6PL18 1390 aa15.59■□□□□ 0.09
SNRPD1-203ENST00000579618 DDX17Q92841 729 aaKnown RBP15.58■□□□□ 0.08
SNRPD1-203ENST00000579618 RRBP1Q9P2E9 1410 aaKnown RBP15.58■□□□□ 0.08
SNRPD1-203ENST00000579618 NRXN3Q9Y4C0 1643 aa15.57■□□□□ 0.08
SNRPD1-203ENST00000579618 E9PCH4 1651 aa15.57■□□□□ 0.08
SNRPD1-203ENST00000579618 NALCNQ8IZF0 1738 aa15.57■□□□□ 0.08
SNRPD1-203ENST00000579618 CHGAP10645 457 aaKnown RBP15.56■□□□□ 0.08
SNRPD1-203ENST00000579618 HDGFP51858 240 aaKnown RBP15.56■□□□□ 0.08
SNRPD1-203ENST00000579618 AMOTL2Q9Y2J4 779 aa15.56■□□□□ 0.08
SNRPD1-203ENST00000579618 ADGRL2O95490 1459 aa15.56■□□□□ 0.08
SNRPD1-203ENST00000579618 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.55■□□□□ 0.08
SNRPD1-203ENST00000579618 EP400Q96L91 3159 aa15.55■□□□□ 0.08
SNRPD1-203ENST00000579618 LRRC59Q96AG4 307 aaKnown RBP15.54■□□□□ 0.08
SNRPD1-203ENST00000579618 ZRANB1Q9UGI0 708 aa15.54■□□□□ 0.08
SNRPD1-203ENST00000579618 ADAMTS2O95450 1211 aa15.52■□□□□ 0.08
SNRPD1-203ENST00000579618 TRIM26Q12899 539 aaPredicted RBP15.52■□□□□ 0.08
SNRPD1-203ENST00000579618 LAMC1P11047 1609 aa15.51■□□□□ 0.07
SNRPD1-203ENST00000579618 NGLY1Q96IV0 654 aa15.51■□□□□ 0.07
SNRPD1-203ENST00000579618 ANKRD50Q9ULJ7 1429 aa15.51■□□□□ 0.07
SNRPD1-203ENST00000579618 ADGRL3Q9HAR2 1447 aa15.5■□□□□ 0.07
SNRPD1-203ENST00000579618 IQGAP3Q86VI3 1631 aa15.48■□□□□ 0.07
SNRPD1-203ENST00000579618 USP21Q9UK80 565 aa15.48■□□□□ 0.07
SNRPD1-203ENST00000579618 ATRNO75882 1429 aa15.48■□□□□ 0.07
SNRPD1-203ENST00000579618 COL22A1Q8NFW1 1626 aaPredicted RBP15.47■□□□□ 0.07
SNRPD1-203ENST00000579618 FAM50AQ14320 339 aaKnown RBP15.46■□□□□ 0.07
SNRPD1-203ENST00000579618 TRPC5Q9UL62 973 aaPredicted RBP15.46■□□□□ 0.07
SNRPD1-203ENST00000579618 METP08581 1390 aa15.46■□□□□ 0.07
SNRPD1-203ENST00000579618 C1orf167Q5SNV9 1468 aa15.46■□□□□ 0.06
SNRPD1-203ENST00000579618 FOXD1Q16676 465 aa15.45■□□□□ 0.06
SNRPD1-203ENST00000579618 MARF1Q9Y4F3 1742 aaKnown RBP15.45■□□□□ 0.06
SNRPD1-203ENST00000579618 PTCH1Q13635 1447 aa15.44■□□□□ 0.06
SNRPD1-203ENST00000579618 LRP5O75197 1615 aa15.44■□□□□ 0.06
SNRPD1-203ENST00000579618 FNBP4Q8N3X1 1017 aaPredicted RBP15.42■□□□□ 0.06
SNRPD1-203ENST00000579618 BCL9LQ86UU0 1499 aa15.41■□□□□ 0.06
SNRPD1-203ENST00000579618 SOS2Q07890 1332 aaPredicted RBP15.41■□□□□ 0.06
SNRPD1-203ENST00000579618 MYOM2P54296 1465 aa15.4■□□□□ 0.06
SNRPD1-203ENST00000579618 SPHKAPQ2M3C7 1700 aa15.4■□□□□ 0.06
SNRPD1-203ENST00000579618 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.4■□□□□ 0.06
SNRPD1-203ENST00000579618 CCDC125Q86Z20 511 aa15.39■□□□□ 0.05
SNRPD1-203ENST00000579618 GLI3P10071 1580 aa15.39■□□□□ 0.05
SNRPD1-203ENST00000579618 BRWD3Q6RI45 1802 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms